Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 3.9e-172 608.2 344 100.0
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 3.4e-152 542.0 344 89.8
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 1.3e-119 433.7 344 66.9
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 1.9e-118 429.9 344 75.3
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 1.4e-113 413.7 344 72.4
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 9.7e-107 391.0 344 68.6
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 1.7e-106 390.2 347 69.7
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 1.1e-105 387.5 344 59.3
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 6.9e-105 384.8 306 76.5
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 7.7e-104 381.3 344 57.3
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 2.2e-103 379.8 344 65.4
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 2.1e-101 373.2 344 66.6
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 6.1e-101 371.7 341 65.1
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 2.6e-99 366.3 324 65.4
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 4.4e-99 365.5 339 64.0
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 4.4e-99 365.5 344 56.7
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 7.4e-99 364.8 344 62.5
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 2.8e-98 362.8 331 64.4
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 3.7e-98 362.5 334 61.7
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 6.3e-98 361.7 344 57.0
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 7.0e-97 358.2 344 61.3
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 9.1e-97 357.8 344 61.0
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 3.5e-96 355.9 344 57.6
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 4.5e-96 355.5 337 53.4
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 7.7e-96 354.8 345 57.7
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.0e-95 354.4 344 61.0
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 2.2e-95 353.2 344 59.3
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 2.9e-95 352.8 342 60.2
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 8.5e-95 351.3 315 57.8
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 1.5e-94 350.5 318 56.3
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 3.2e-94 349.4 319 56.7
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 3.2e-94 349.4 300 59.7
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 5.5e-94 348.6 333 59.5
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 5.5e-94 348.6 344 61.6
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 7.2e-94 348.2 315 56.5
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 7.2e-94 348.2 318 56.0
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 2.7e-93 346.3 330 56.4
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 2.7e-93 346.3 318 56.0
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 4.7e-93 345.5 350 54.3
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 1.0e-92 344.4 344 54.1
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 1.8e-92 343.6 325 61.8
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 2.3e-92 343.2 344 57.8
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 2.3e-92 343.2 339 54.9
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 2.3e-92 343.2 331 56.2
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 4.0e-92 342.4 339 54.6
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 4.0e-92 342.4 339 54.3
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 5.2e-92 342.0 350 63.4
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 8.8e-92 341.3 339 51.0
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 2.0e-91 340.1 341 60.7
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 2.6e-91 339.7 313 55.9
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 5.7e-91 338.6 344 59.9
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 9.7e-91 337.8 320 62.2
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 2.2e-90 336.7 324 54.3
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 6.3e-90 335.1 346 52.0
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 3.1e-89 332.8 344 59.3
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 4.1e-89 332.4 315 64.4
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 9.1e-89 331.3 344 59.3
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 2.0e-88 330.1 326 61.7
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 2.0e-88 330.1 348 60.3
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 1.0e-87 327.8 323 52.9
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 1.5e-86 323.9 339 59.3
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 4.2e-86 322.4 315 54.9
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 9.4e-86 321.2 319 58.3
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 8.8e-84 314.7 315 61.0
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 8.8e-84 314.7 336 53.9
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.5e-83 313.9 335 60.0
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 9.8e-83 311.2 319 58.3
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 1.7e-82 310.5 319 58.3
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 2.8e-82 309.7 319 58.3
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 3.7e-82 309.3 319 58.3
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 4.8e-82 308.9 340 52.1
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 6.3e-82 308.5 319 58.3
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 6.3e-82 308.5 352 50.9
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 1.1e-81 307.8 319 58.0
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 2.4e-81 306.6 319 58.3
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 2.7e-80 303.1 316 50.9
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 5.9e-80 302.0 320 58.1
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 1.0e-79 301.2 320 58.1
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 1.0e-79 301.2 354 48.9
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 1.3e-79 300.8 316 50.6
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 2.9e-79 299.7 320 57.8
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 1.5e-78 297.4 330 55.8
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 1.5e-78 297.4 330 55.8
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 5.5e-78 295.4 340 50.9
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 3.6e-77 292.7 319 48.6
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 2.3e-76 290.0 310 50.0
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 2.8e-74 283.1 318 49.7
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 1.8e-68 263.8 317 55.2
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 8.9e-68 261.5 317 52.7
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 5.4e-65 252.3 270 50.7
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 1.7e-58 230.7 230 63.9
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 7.8e-56 221.9 165 64.2
Phvul.005G098533 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 6.2e-53 212.2 172 61.6
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 8.9e-52 208.4 238 45.0
Cpa.g.sc209.4 Carica papaya HOM05D007320 ORTHO05D009290 1.7e-39 167.5 148 55.4
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 7.6e-35 152.1 161 52.8
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 2.3e-31 140.6 113 61.9
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 3.3e-30 136.7 155 49.0
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 4.5e-27 126.3 184 41.3
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 5.8e-27 125.9 183 56.8
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 7.6e-27 125.6 99 66.7
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 7.4e-22 109.0 107 54.2
arahy.Tifrunner.gnm1.ann1.5PR57S Arachis hypogaea HOM05D007320 ORTHO05D009290 3.8e-18 96.7 106 52.8
Peaxi162Scf00102g01049 Petunia axillaris HOM05D007320 ORTHO05D009290 4.8e-13 79.7 73 57.5
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 1.4e-12 78.2 117 41.0


User provided reference genes

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