Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 3.4e-88 328.6 199 100.0
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 9.7e-51 204.1 196 67.9
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 6.1e-45 184.9 224 59.4
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 1.8e-44 183.3 222 64.4
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 2.8e-42 176.0 218 58.3
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 5.3e-41 171.8 209 67.0
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 8.0e-37 157.9 222 58.6
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 1.7e-34 150.2 225 56.9
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 1.2e-32 144.1 235 55.3
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 2.7e-32 142.9 236 47.9
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 4.5e-32 142.1 210 48.6
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 1.0e-28 131.0 226 45.6
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 1.4e-28 130.6 240 43.8
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 3.0e-28 129.4 207 53.6
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 6.8e-28 128.3 235 52.8
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 2.0e-27 126.7 217 43.8
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 2.0e-27 126.7 228 45.2
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 2.6e-27 126.3 242 43.0
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 4.4e-27 125.6 230 43.0
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 7.5e-27 124.8 237 43.0
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 1.7e-26 123.6 225 44.4
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 6.3e-26 121.7 231 42.4
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 8.3e-26 121.3 230 47.4
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 9.2e-25 117.9 239 41.0
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 1.6e-24 117.1 229 45.4
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 1.6e-24 117.1 193 59.1
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 4.5e-24 115.5 207 48.3
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 2.3e-23 113.2 239 41.4
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 2.9e-23 112.8 119 60.5
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 2.9e-23 112.8 176 56.8
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 2.9e-23 112.8 239 40.2
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 2.9e-23 112.8 221 42.5
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 2.9e-23 112.8 220 45.5
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 2.9e-23 112.8 221 51.1
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 3.8e-23 112.5 225 49.8
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 6.6e-23 111.7 231 41.1
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 8.6e-23 111.3 238 53.4
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 1.5e-22 110.5 222 42.8
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 1.5e-22 110.5 238 39.9
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 1.9e-22 110.2 197 52.8
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 9.5e-22 107.8 184 47.3
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 9.5e-22 107.8 212 45.3
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 1.2e-21 107.5 202 49.5
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 1.6e-21 107.1 236 40.3
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 2.1e-21 106.7 218 41.7
Rhsim06G0135700 Rhododendron simsii HOM05D007603 ORTHO05D009604 2.8e-21 106.3 108 71.3
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 1.4e-20 104.0 206 47.1
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 3.0e-20 102.8 217 41.5
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 4.0e-20 102.4 223 41.3
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 8.9e-20 101.3 223 40.8
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 8.9e-20 101.3 205 43.4
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 1.2e-19 100.9 239 43.1
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 1.5e-19 100.5 219 39.3
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 3.4e-19 99.4 214 41.1
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 3.4e-19 99.4 220 44.1
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 5.7e-19 98.6 214 41.6
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 5.7e-19 98.6 214 41.6
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 5.7e-19 98.6 214 41.6
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 7.5e-19 98.2 227 37.4
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 9.8e-19 97.8 212 40.6
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 2.2e-18 96.7 220 48.2
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 8.3e-18 94.7 212 40.6
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 1.4e-17 94.0 237 38.8
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 1.4e-17 94.0 229 37.6
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 2.4e-17 93.2 214 37.9
unitig_749.g13962 Utricularia gibba HOM05D007603 ORTHO05D009604 9.2e-17 91.3 204 38.2
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 1.6e-16 90.5 124 51.6
A09p47630 Brassica napus HOM05D007603 ORTHO05D009604 2.0e-16 90.1 221 49.3
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 3.5e-16 89.4 217 41.9
FAN14G3046 Fragaria x ananassa HOM05D007603 ORTHO05D016291 4.6e-16 89.0 187 40.6
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 7.8e-16 88.2 225 39.6
BcaC07g39795 Brassica carinata HOM05D007603 ORTHO05D009604 7.8e-16 88.2 221 48.9
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 7.8e-16 88.2 241 36.9
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 7.8e-16 88.2 208 38.5
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 1.0e-15 87.8 211 41.2
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 1.3e-15 87.4 156 53.8
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 1.7e-15 87.0 213 38.0
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 2.3e-15 86.7 199 39.7
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 5.0e-15 85.5 224 42.4
BcaB01g00169 Brassica carinata HOM05D007603 ORTHO05D009604 1.9e-14 83.6 224 45.1
Hund01003 Selenicereus undatus HOM05D007603 ORTHO05D009604 4.3e-14 82.4 236 36.4
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 5.6e-14 82.0 205 36.6
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 9.5e-14 81.3 224 38.8
CARHR164600 Cardamine hirsuta HOM05D007603 ORTHO05D009604 9.5e-14 81.3 228 44.3
C08p29830 Brassica napus HOM05D007603 ORTHO05D009604 2.8e-13 79.7 213 48.4
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 4.7e-13 79.0 257 39.7
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 4.7e-13 79.0 208 37.5
Hund07856 Selenicereus undatus HOM05D007603 ORTHO05D009604 1.8e-12 77.0 102 47.1
BolC8t50594H Brassica oleracea HOM05D007603 ORTHO05D009604 2.2e-10 70.1 212 47.2
AUR62036075 Chenopodium quinoa HOM05D007603 ORTHO05D009604 3.7e-10 69.3 124 42.7
AUR62043430 Chenopodium quinoa HOM05D007603 ORTHO05D009604 1.4e-09 67.4 132 41.7
EL10Ac9g20838 Beta vulgaris HOM05D007603 ORTHO05D009604 9.2e-09 64.7 226 38.1
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 6.0e-08 62.0 137 41.6
SalBow7G4116 Salvia bowleyana HOM05D007603 ORTHO05D009604 1.1e-06 57.8 69 53.6


User provided reference genes

Program Settings