Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12306 Vaccinium macrocarpon HOM05D008409 ORTHO05D010483 1.9e-62 242.3 119 100.0
Thecc.02G180200 Theobroma cacao HOM05D008409 ORTHO05D010483 3.5e-48 194.9 119 79.0
Actinidia11031 Actinidia chinensis HOM05D008409 ORTHO05D010483 4.6e-48 194.5 119 78.2
COL.COLO4_30195 Corchorus olitorius HOM05D008409 ORTHO05D010483 1.9e-46 189.1 119 75.6
Haze_13167 Corylus avellana HOM05D008409 ORTHO05D010483 2.8e-45 185.3 119 73.9
Atru.chr6.2992 Acer truncatum HOM05D008409 ORTHO05D010483 3.6e-45 184.9 119 74.8
QL08p038864 Quercus lobata HOM05D008409 ORTHO05D010483 6.2e-45 184.1 117 74.4
GSVIVG01020550001 Vitis vinifera HOM05D008409 ORTHO05D010483 1.8e-44 182.6 117 74.4
CiPaw.04G126300 Carya illinoinensis HOM05D008409 ORTHO05D010483 5.3e-44 181.0 119 72.3
Gorai.012G128600 Gossypium raimondii HOM05D008409 ORTHO05D010483 5.3e-44 181.0 120 73.3
Manes.12G089218 Manihot esculenta HOM05D008409 ORTHO05D010483 5.3e-44 181.0 114 72.8
Potri.013G131000 Populus trichocarpa HOM05D008409 ORTHO05D010483 9.0e-44 180.3 119 71.4
Gohir.D04G143000 Gossypium hirsutum HOM05D008409 ORTHO05D010483 4.5e-43 177.9 120 72.5
TAR627G0101 Trochodendron aralioides HOM05D008409 ORTHO05D010483 4.5e-43 177.9 116 70.7
Ciclev10017070m.g Citrus clementina HOM05D008409 ORTHO05D010483 7.6e-43 177.2 119 72.3
PGR142G1945 Punica granatum HOM05D008409 ORTHO05D010483 7.6e-43 177.2 119 68.9
Gohir.A04G103600 Gossypium hirsutum HOM05D008409 ORTHO05D010483 9.9e-43 176.8 120 71.7
TWI36G0630 Tripterygium wilfordii HOM05D008409 ORTHO05D010483 1.3e-42 176.4 119 69.7
Sabra13G0110600 Salix brachista HOM05D008409 ORTHO05D010483 8.4e-42 173.7 115 69.6
MELO3C018733.2 Cucumis melo HOM05D008409 ORTHO05D010483 1.4e-41 172.9 119 66.4
Nn1g06548 Nelumbo nucifera HOM05D008409 ORTHO05D010483 1.4e-41 172.9 116 68.1
PSO675G8696 Papaver somniferum HOM05D008409 ORTHO05D010483 2.4e-41 172.2 114 71.1
CsaV3_7G004460 Cucumis sativus L. HOM05D008409 ORTHO05D010483 1.6e-40 169.5 119 64.7
Aqoxy1G02429 Aquilegia oxysepala HOM05D008409 ORTHO05D010483 6.0e-40 167.5 115 66.1
ClCG07G002880 Citrullus lanatus HOM05D008409 ORTHO05D010483 6.0e-40 167.5 119 64.7
PSO541G0816 Papaver somniferum HOM05D008409 ORTHO05D010483 2.3e-39 165.6 116 68.1
Os08g0374000 Oryza sativa ssp. japonica HOM05D008409 ORTHO05D010483 1.9e-38 162.5 112 66.1
Sed0018099 Sechium edule HOM05D008409 ORTHO05D010483 3.3e-38 161.8 117 61.5
CAN.G578.4 Capsicum annuum HOM05D008409 ORTHO05D010483 3.1e-36 155.2 111 66.7
CSS0031688 Camellia sinensis var. sinensis HOM05D008409 ORTHO05D010483 5.3e-36 154.5 109 71.6
Peaxi162Scf00059g01918 Petunia axillaris HOM05D008409 ORTHO05D010483 5.3e-36 154.5 114 61.4
MD09G1247200 Malus domestica HOM05D008409 ORTHO05D010483 6.9e-36 154.1 116 64.7
PGSC0003DMG400013143 Solanum tuberosum HOM05D008409 ORTHO05D010483 6.9e-36 154.1 115 62.6
ATR0737G133 Amborella trichopoda HOM05D008409 ORTHO05D010483 8.4e-34 147.1 114 58.8
Solyc10g008330.4 Solanum lycopersicum HOM05D008409 ORTHO05D010483 1.9e-33 146.0 112 61.6
Sopen10g004190 Solanum pennellii HOM05D008409 ORTHO05D010483 4.2e-33 144.8 112 60.7
QL08p038938 Quercus lobata HOM05D008409 ORTHO05D010483 1.3e-31 139.8 93 69.9
MBI06_g04179_MAGBIO Magnolia biondii HOM05D008409 ORTHO05D010483 2.3e-31 139.0 114 62.3
SEGI_00232 Sequoiadendron giganteum HOM05D008409 ORTHO05D010483 2.0e-27 125.9 121 49.6
Nitab4.5_0009473g0020 Nicotiana tabacum HOM05D008409 ORTHO05D010483 1.0e-26 123.6 115 55.7
Dinv23634 Davidia involucrata HOM05D008409 ORTHO05D010483 2.0e-19 99.4 76 61.8
SMO332G0032 Selaginella moellendorffii HOM05D008409 ORTHO05D000186 9.1e-12 73.9 113 34.5
Manes.05G090000 Manihot esculenta HOM05D000197 ORTHO05D000114 5.5e-09 64.7 115 33.0
SGA_v2.0_scaffold8G04238 Striga asiatica HOM05D000197 ORTHO05D000114 7.2e-09 64.3 111 33.3
ECA246G2358 Erigeron canadensis HOM05D000197 ORTHO05D000114 1.2e-08 63.5 115 33.0
Eucgr.B02546 Eucalyptus grandis HOM05D000197 ORTHO05D000114 7.9e-08 60.8 113 38.1
PGR119G0191 Punica granatum HOM05D000197 ORTHO05D000114 7.9e-08 60.8 109 36.7
HanXRQChr11g0351041 Helianthus annuus HOM05D000197 ORTHO05D000114 1.0e-07 60.5 113 34.5
Pp3c8_12660 Physcomitrium patens HOM05D008409 ORTHO05D010483 1.0e-07 60.5 110 27.3
SMO141G0292 Selaginella moellendorffii HOM05D000322 ORTHO05D010483 1.4e-07 60.1 120 33.3
HanXRQChr17g0563811 Helianthus annuus HOM05D000197 ORTHO05D000114 3.0e-07 58.9 113 34.5
Lsat_1_v5_gn_3_48941 Lactuca sativa HOM05D000197 ORTHO05D000114 3.9e-07 58.5 113 34.5
Atru.chr11.1977 Acer truncatum HOM05D000197 ORTHO05D000114 6.7e-07 57.8 113 34.5
HPP92_010019 Vanilla planifolia HOM05D000197 ORTHO05D000114 8.8e-07 57.4 113 31.9
HPP92_015289 Vanilla planifolia HOM05D000197 ORTHO05D000114 8.8e-07 57.4 113 31.9
Hund05969 Selenicereus undatus HOM05D000197 ORTHO05D000114 1.1e-06 57.0 113 32.7
Lsat_1_v5_gn_5_100541 Lactuca sativa HOM05D000197 ORTHO05D000114 2.6e-06 55.8 113 33.6
Lsat_1_v5_gn_5_100601 Lactuca sativa HOM05D000197 ORTHO05D000114 3.3e-06 55.5 113 32.7
THA.LOC104822191 Tarenaya hassleriana HOM05D000197 ORTHO05D000114 4.4e-06 55.1 113 33.6
CsaV3_5G031770 Cucumis sativus L. HOM05D000197 ORTHO05D000114 5.7e-06 54.7 111 33.3
SalBow2G0185 Salvia bowleyana HOM05D000197 ORTHO05D000114 5.7e-06 54.7 115 34.8
Hund01084 Selenicereus undatus HOM05D008409 ORTHO05D010483 9.7e-06 53.9 41 61.0


User provided reference genes

Program Settings