Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12226 Vaccinium macrocarpon HOM05D005864 ORTHO05D006770 2.4e-260 901.7 498 100.0
Rhsim06G0158200 Rhododendron simsii HOM05D005864 ORTHO05D006770 9.3e-143 511.1 502 67.3
Actinidia12503 Actinidia chinensis HOM05D005864 ORTHO05D006770 2.5e-71 273.9 526 40.1
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 9.5e-71 271.9 530 40.2
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 1.2e-60 238.4 525 37.0
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 4.0e-53 213.4 531 35.0
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 6.0e-49 199.5 510 34.7
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 5.6e-47 193.0 523 31.7
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 6.4e-43 179.5 521 31.9
Actinidia32077 Actinidia chinensis HOM05D005864 ORTHO05D006770 1.4e-42 178.3 367 36.5
Manes.12G077600 Manihot esculenta HOM05D005864 ORTHO05D006770 4.6e-41 173.3 406 36.7
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 5.1e-40 169.9 525 31.8
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 1.3e-38 165.2 517 32.1
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 2.1e-38 164.5 533 30.4
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 3.1e-37 160.6 537 30.5
Cpa.g.sc8.234 Carica papaya HOM05D005864 ORTHO05D006770 6.4e-35 152.9 503 30.2
Prupe.3G220100 Prunus persica HOM05D005864 ORTHO05D006770 6.4e-35 152.9 502 32.5
Ciclev10015598m.g Citrus clementina HOM05D005864 ORTHO05D006770 1.2e-33 148.7 499 30.7
Lj3g0027429 Lotus japonicus HOM05D005864 ORTHO05D006770 1.2e-33 148.7 516 28.9
Glyma.06G306800 Glycine max HOM05D005864 ORTHO05D006770 3.5e-33 147.1 510 30.8
Glyma.12G101400 Glycine max HOM05D005864 ORTHO05D006770 7.9e-33 146.0 510 30.6
Lalb_Chr19g0135701 Lupinus albus HOM05D005864 ORTHO05D006770 1.8e-32 144.8 519 29.1
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 1.8e-32 144.8 522 26.8
Peaxi162Scf00012g03212 Petunia axillaris HOM05D005864 ORTHO05D006770 3.0e-32 144.1 508 29.3
Solyc12g005770.3 Solanum lycopersicum HOM05D005864 ORTHO05D006770 4.3e-31 140.2 531 29.8
TAR624G1226 Trochodendron aralioides HOM05D005864 ORTHO05D006770 4.3e-31 140.2 349 33.8
Haze_12896 Corylus avellana HOM05D005864 ORTHO05D006770 2.8e-30 137.5 545 28.3
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 3.6e-30 137.1 529 28.2
CDE05G3135 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 4.8e-30 136.7 521 29.2
MELO3C018803.2 Cucumis melo HOM05D005864 ORTHO05D006770 4.8e-30 136.7 526 27.6
Oeu041940.1 Olea europaea HOM05D005864 ORTHO05D006770 1.1e-29 135.6 577 28.8
Psat7g195480 Pisum sativum HOM05D005864 ORTHO05D006770 2.4e-29 134.4 517 28.0
VMungo1127G2082 Vigna mungo HOM05D005864 ORTHO05D006770 2.4e-29 134.4 512 29.5
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 3.1e-29 134.0 527 26.9
ClCG02G001780 Citrullus lanatus HOM05D005864 ORTHO05D006770 4.0e-29 133.7 551 27.2
Cc05_g05040 Coffea canephora HOM05D005864 ORTHO05D006770 4.0e-29 133.7 547 27.6
arahy.Tifrunner.gnm1.ann1.VAE2IM Arachis hypogaea HOM05D005864 ORTHO05D006770 6.9e-29 132.9 555 30.1
ATR0794G118 Amborella trichopoda HOM05D005864 ORTHO05D006770 2.0e-28 131.3 540 29.3
DCAR_021187 Daucus carota HOM05D005864 ORTHO05D006770 2.0e-28 131.3 367 30.8
HPP92_002197 Vanilla planifolia HOM05D005864 ORTHO05D006770 3.4e-28 130.6 520 29.2
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 5.8e-28 129.8 536 27.6
Medtr4g046697 Medicago truncatula HOM05D005864 ORTHO05D006770 5.8e-28 129.8 528 27.1
Sabra07G0098400 Salix brachista HOM05D005864 ORTHO05D006770 1.3e-27 128.6 395 32.4
Sed0020795 Sechium edule HOM05D005864 ORTHO05D006770 1.3e-27 128.6 527 32.4
arahy.Tifrunner.gnm1.ann1.UG5YAZ Arachis hypogaea HOM05D005864 ORTHO05D006770 4.9e-27 126.7 555 29.2
SHI10272 Sapria himalayana HOM05D005864 ORTHO05D006770 6.4e-27 126.3 496 30.4
Nitab4.5_0006207g0020 Nicotiana tabacum HOM05D005864 ORTHO05D006770 1.1e-26 125.6 547 26.9
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 1.4e-26 125.2 510 30.4
HanXRQChr07g0191611 Helianthus annuus HOM05D005864 ORTHO05D006770 3.2e-26 124.0 552 27.0
Ca_19101_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 4.2e-26 123.6 378 30.2
Phvul.011G106100 Phaseolus vulgaris HOM05D005864 ORTHO05D006770 4.2e-26 123.6 510 27.5
CSS0029042 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 5.5e-26 123.2 168 45.2
Sopen12g001690 Solanum pennellii HOM05D005864 ORTHO05D006770 9.3e-26 122.5 518 29.2
CAN.G80.20 Capsicum annuum HOM05D005864 ORTHO05D006770 1.6e-25 121.7 527 26.9
Aqoxy4G02070 Aquilegia oxysepala HOM05D005864 ORTHO05D006770 2.7e-25 120.9 518 25.9
Duzib052G0164 Durio zibethinus HOM05D005864 ORTHO05D006770 7.9e-25 119.4 537 30.7
Gohir.A03G163800 Gossypium hirsutum HOM05D005864 ORTHO05D006770 1.8e-24 118.2 520 29.6
Dinv18530 Davidia involucrata HOM05D005864 ORTHO05D006770 3.9e-24 117.1 335 32.8
TWI75G1887 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 3.9e-24 117.1 505 26.5
CDE05G1184 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 1.3e-22 112.1 396 30.3
COL.COLO4_12982 Corchorus olitorius HOM05D005864 ORTHO05D006770 1.6e-22 111.7 416 26.0
Gohir.D02G187200 Gossypium hirsutum HOM05D005864 ORTHO05D006770 2.1e-22 111.3 489 26.6
Eucgr.K00844 Eucalyptus grandis HOM05D005864 ORTHO05D006770 9.0e-21 105.9 303 32.0
PGSC0003DMG401024331 Solanum tuberosum HOM05D005864 ORTHO05D006770 3.4e-20 104.0 395 29.1
PSO675G8332 Papaver somniferum HOM05D005864 ORTHO05D006770 4.5e-20 103.6 502 25.5
CsaV3_7G003760 Cucumis sativus L. HOM05D005864 ORTHO05D006770 1.0e-19 102.4 529 24.0
FAN09G3055 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.0e-19 102.4 482 27.0
FvH4_6g43530 Fragaria vesca HOM05D005864 ORTHO05D006770 1.7e-19 101.7 511 26.2
FAN05G0568 Fragaria x ananassa HOM05D005864 ORTHO05D006770 2.9e-19 100.9 486 26.1
TAR626G1271 Trochodendron aralioides HOM05D005864 ORTHO05D006770 3.8e-19 100.5 181 40.9
MD09G1105200 Malus domestica HOM05D005864 ORTHO05D006770 6.5e-19 99.8 359 29.5
Sed0014520 Sechium edule HOM05D005864 ORTHO05D006770 6.5e-19 99.8 375 28.0
TPR.G19040 Trifolium pratense HOM05D005864 ORTHO05D006770 2.5e-18 97.8 393 29.8
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-18 97.4 529 24.4
Gorai.005G209600 Gossypium raimondii HOM05D005864 ORTHO05D006770 4.2e-18 97.1 381 34.1
Migut.M00396 Erythranthe guttata HOM05D005864 ORTHO05D006770 9.3e-18 95.9 507 26.6
PGR142G4274 Punica granatum HOM05D005864 ORTHO05D006770 9.3e-18 95.9 507 25.4
Nitab4.5_0000631g0060 Nicotiana tabacum HOM05D005864 ORTHO05D006770 1.6e-17 95.1 203 36.5
unitig_699.g19613 Utricularia gibba HOM05D005864 ORTHO05D006770 2.1e-17 94.7 519 25.6
unitig_85.g27303 Utricularia gibba HOM05D005864 ORTHO05D006770 2.1e-17 94.7 500 24.6
PSO541G3214 Papaver somniferum HOM05D005864 ORTHO05D006770 2.7e-17 94.4 507 26.4
Lsat_1_v5_gn_3_43700 Lactuca sativa HOM05D005864 ORTHO05D006770 6.0e-17 93.2 206 36.4
CSS0011199 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 1.3e-16 92.0 102 52.9
CSS0018090 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 6.7e-16 89.7 70 65.7
FAN14G4164 Fragaria x ananassa HOM05D005864 ORTHO05D006770 6.7e-16 89.7 530 24.7
EL10Ac9g20653 Beta vulgaris HOM05D005864 ORTHO05D006770 7.4e-15 86.3 503 29.4
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 7.4e-15 86.3 519 25.4
AUR62025062 Chenopodium quinoa HOM05D005864 ORTHO05D006770 2.1e-14 84.7 571 25.0
Os02g0161200 Oryza sativa ssp. japonica HOM05D005864 ORTHO05D006770 2.1e-14 84.7 503 23.7
FAN02G2067 Fragaria x ananassa HOM05D005864 ORTHO05D006770 6.3e-14 83.2 366 27.3
TAR626G0200 Trochodendron aralioides HOM05D005864 ORTHO05D006770 2.4e-13 81.3 199 36.7
RcHm_v2.0_Chr2g0160051 Rosa chinensis HOM05D005864 ORTHO05D006770 3.8e-11 73.9 210 31.4
FAN09G4739 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.2e-09 68.9 42 71.4
Zm00001eb207650 Zea mays HOM05D005864 ORTHO05D006770 2.1e-09 68.2 513 23.0
CDE05G1677 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 2.7e-09 67.8 41 75.6
Aa31LG8G8400 Aethionema arabicum HOM05D005864 ORTHO05D006770 4.6e-09 67.0 513 23.6
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 7.9e-09 66.2 478 24.7
Mapoly0099s0053 Marchantia polymorpha HOM05D005864 ORTHO05D006770 8.7e-08 62.8 231 32.9
TAR375G0046 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.1e-07 62.4 45 66.7
Ah.01g003700 Amaranthus hybridus HOM05D005864 ORTHO05D006770 2.5e-07 61.2 382 24.6
TAR372G0002 Trochodendron aralioides HOM05D005864 ORTHO05D006770 2.5e-07 61.2 45 66.7
TAR353G0003 Trochodendron aralioides HOM05D005864 ORTHO05D006770 4.3e-07 60.5 44 68.2


User provided reference genes

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