Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12178 Vaccinium macrocarpon HOM05D000073 ORTHO05D426496 1.4e-127 459.5 223 100.0
vmacro09596 Vaccinium macrocarpon HOM05D000073 ORTHO05D000033 1.3e-11 74.3 37 91.9
Hund23357 Selenicereus undatus HOM05D000073 ORTHO05D000033 1.9e-10 70.5 92 46.7
Glyma.06G263100 Glycine max HOM05D000073 ORTHO05D000033 3.5e-09 66.2 37 83.8
Psat7g160520 Pisum sativum HOM05D000073 ORTHO05D000033 4.6e-09 65.9 37 83.8
AUR62029270 Chenopodium quinoa HOM05D000073 ORTHO05D000033 7.9e-09 65.1 37 81.1
AUR62041147 Chenopodium quinoa HOM05D000073 ORTHO05D000033 7.9e-09 65.1 37 81.1
MBI18_g30444_MAGBIO Magnolia biondii HOM05D000073 ORTHO05D000033 7.9e-09 65.1 38 76.3
Actinidia35304 Actinidia chinensis HOM05D000073 ORTHO05D000033 1.0e-08 64.7 114 41.2
Dinv22326 Davidia involucrata HOM05D000073 ORTHO05D000033 1.3e-08 64.3 37 81.1
Eucgr.F03394 Eucalyptus grandis HOM05D000073 ORTHO05D000033 1.3e-08 64.3 117 40.2
CAN.G162.134 Capsicum annuum HOM05D000073 ORTHO05D000033 2.3e-08 63.5 114 39.5
Migut.M01830 Erythranthe guttata HOM05D000073 ORTHO05D000033 3.0e-08 63.2 117 39.3
Lj3g0007522 Lotus japonicus HOM05D000073 ORTHO05D000033 3.0e-08 63.2 37 81.1
Haze_09574 Corylus avellana HOM05D000073 ORTHO05D000033 3.9e-08 62.8 37 78.4
QL08p014495 Quercus lobata HOM05D000073 ORTHO05D000033 3.9e-08 62.8 37 78.4
Ca_18834_v3 Cicer arietinum L. HOM05D000073 ORTHO05D000033 5.1e-08 62.4 37 78.4
Ca_30093_v3 Cicer arietinum L. HOM05D000073 ORTHO05D000033 5.1e-08 62.4 37 78.4
FvH4_3g21512 Fragaria vesca HOM05D000073 ORTHO05D000033 5.1e-08 62.4 37 75.7
FAN11G1546 Fragaria x ananassa HOM05D000073 ORTHO05D004110 5.1e-08 62.4 37 75.7
FAN21G1038 Fragaria x ananassa HOM05D000073 ORTHO05D000033 5.1e-08 62.4 37 75.7
FAN25G2942 Fragaria x ananassa HOM05D000073 ORTHO05D004110 5.1e-08 62.4 37 75.7
Lj8A164T51 Lonicera japonica HOM05D000073 ORTHO05D000033 5.1e-08 62.4 37 81.1
Oeu035777.1 Olea europaea HOM05D000073 ORTHO05D000033 5.1e-08 62.4 37 78.4
TAR627G0323 Trochodendron aralioides HOM05D000073 ORTHO05D000033 5.1e-08 62.4 37 81.1
Nitab4.5_0000552g0080 Nicotiana tabacum HOM05D000073 ORTHO05D000033 6.7e-08 62.0 114 39.5
Solyc07g063880.4 Solanum lycopersicum HOM05D000073 ORTHO05D000033 6.7e-08 62.0 114 38.6
BcaB08g35814 Brassica carinata HOM05D000073 ORTHO05D000033 8.7e-08 61.6 147 34.7
Medtr4g081530 Medicago truncatula HOM05D000073 ORTHO05D000033 1.1e-07 61.2 37 78.4
Sopen07g032010 Solanum pennellii HOM05D000073 ORTHO05D000033 1.1e-07 61.2 114 38.6
Aqoxy4G01895 Aquilegia oxysepala HOM05D000073 ORTHO05D000033 1.5e-07 60.8 37 75.7
MSTRG.6879 Avicennia marina HOM05D000073 ORTHO05D000033 1.5e-07 60.8 36 75.0
CiPaw.11G180400 Carya illinoinensis HOM05D000073 ORTHO05D000033 1.5e-07 60.8 117 39.3
TPR.G3339 Trifolium pratense HOM05D000073 ORTHO05D000033 1.5e-07 60.8 37 75.7
TWI38G0678 Tripterygium wilfordii HOM05D000073 ORTHO05D000033 1.5e-07 60.8 37 78.4
VMungo1127G2309 Vigna mungo HOM05D000073 ORTHO05D000033 1.9e-07 60.5 36 77.8
Ah.04g165170 Amaranthus hybridus HOM05D000073 ORTHO05D000033 2.5e-07 60.1 37 75.7
Cpa.g.sc80.124 Carica papaya HOM05D000073 ORTHO05D000033 2.5e-07 60.1 37 75.7
Nitab4.5_0003052g0040 Nicotiana tabacum HOM05D000073 ORTHO05D000033 2.5e-07 60.1 114 38.6
RcHm_v2.0_Chr5g0036981 Rosa chinensis HOM05D000073 ORTHO05D000033 2.5e-07 60.1 37 73.0
Sed0002315 Sechium edule HOM05D000073 ORTHO05D000033 2.5e-07 60.1 37 78.4
ClCG05G014960 Citrullus lanatus HOM05D000073 ORTHO05D000033 3.3e-07 59.7 37 78.4
Phvul.011G145900 Phaseolus vulgaris HOM05D000073 ORTHO05D000033 3.3e-07 59.7 37 75.7
RhsimUnG0254700 Rhododendron simsii HOM05D000073 ORTHO05D000033 3.3e-07 59.7 37 81.1
PGSC0003DMG400019235 Solanum tuberosum HOM05D000073 ORTHO05D000033 3.3e-07 59.7 37 73.0
HanXRQChr11g0332111 Helianthus annuus HOM05D000073 ORTHO05D000033 4.3e-07 59.3 37 75.7
Potri.001G409900 Populus trichocarpa HOM05D000073 ORTHO05D000033 4.3e-07 59.3 37 75.7
Sabra16G0281200 Salix brachista HOM05D000073 ORTHO05D000033 4.3e-07 59.3 112 42.0
A10p11780 Brassica napus HOM05D000073 ORTHO05D000033 5.7e-07 58.9 37 73.0
C09p44890 Brassica napus HOM05D000073 ORTHO05D000033 5.7e-07 58.9 37 73.0
COL.COLO4_09536 Corchorus olitorius HOM05D003604 ORTHO05D004110 5.7e-07 58.9 143 32.2
Lsat_1_v5_gn_7_107800 Lactuca sativa HOM05D000073 ORTHO05D000033 5.7e-07 58.9 37 75.7
PSO210G6611 Papaver somniferum HOM05D000073 ORTHO05D000033 5.7e-07 58.9 37 75.7
PSO832G0786 Papaver somniferum HOM05D000073 ORTHO05D000033 5.7e-07 58.9 37 75.7
vmacro12685 Vaccinium macrocarpon HOM05D002000 ORTHO05D002027 5.7e-07 58.9 44 68.2
GSVIVG01014551001 Vitis vinifera HOM05D000073 ORTHO05D000033 5.7e-07 58.9 37 75.7
Duzib213G0735 Durio zibethinus HOM05D000073 ORTHO05D000033 7.4e-07 58.5 37 73.0
Lalb_Chr03g0030221 Lupinus albus HOM05D000073 ORTHO05D000033 7.4e-07 58.5 37 73.0
Sp6g16520 Schrenkiella parvula HOM05D000073 ORTHO05D000033 7.4e-07 58.5 117 38.5
Atru.chr2.3113 Acer truncatum HOM05D000073 ORTHO05D000033 9.6e-07 58.2 37 75.7
Atru.chr2.3132 Acer truncatum HOM05D000073 ORTHO05D000033 9.6e-07 58.2 37 75.7
EL10Ac4g08007 Beta vulgaris HOM05D000073 ORTHO05D000033 9.6e-07 58.2 37 70.3
Peaxi162Scf01365g00032 Petunia axillaris HOM05D000073 ORTHO05D000033 9.6e-07 58.2 37 73.0
Prupe.4G197500 Prunus persica HOM05D000073 ORTHO05D000033 9.6e-07 58.2 37 73.0
BcaC04g20328 Brassica carinata HOM05D000073 ORTHO05D000033 1.3e-06 57.8 117 37.6
BolC9t57360H Brassica oleracea HOM05D000073 ORTHO05D000033 1.3e-06 57.8 117 37.6
Carub.0008s1483 Capsella rubella HOM05D000073 ORTHO05D000033 1.3e-06 57.8 37 70.3
Thecc.07G059300 Theobroma cacao HOM05D000073 ORTHO05D000033 1.3e-06 57.8 37 73.0
unitig_747.g21562 Utricularia gibba HOM05D000073 ORTHO05D000033 1.3e-06 57.8 37 73.0
BraA10t43277Z Brassica rapa HOM05D000073 ORTHO05D000033 1.6e-06 57.4 37 70.3
MD03G1215300 Malus domestica HOM05D000073 ORTHO05D000033 1.6e-06 57.4 117 37.6
AT5G54570 Arabidopsis thaliana HOM05D000073 ORTHO05D000033 2.1e-06 57.0 117 37.6
CANSAT11G1327 Cannabis sativa HOM05D000073 ORTHO05D000033 2.1e-06 57.0 117 35.9
MBI18_g02180_MAGBIO Magnolia biondii HOM05D000073 ORTHO05D000033 2.8e-06 56.6 36 69.4
CSS0029397 Camellia sinensis var. sinensis HOM05D000073 ORTHO05D000033 3.7e-06 56.2 37 70.3
CsaV3_3G022670 Cucumis sativus L. HOM05D000073 ORTHO05D000033 3.7e-06 56.2 36 75.0
SGA_v2.0_scaffold70G23568 Striga asiatica HOM05D000073 ORTHO05D000033 4.8e-06 55.8 37 70.3
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 6.3e-06 55.5 67 47.8
FvH4_4g30310 Fragaria vesca HOM05D000073 ORTHO05D000033 6.3e-06 55.5 37 64.9
FAN07G2265 Fragaria x ananassa HOM05D000073 ORTHO05D000033 6.3e-06 55.5 37 64.9
FAN17G0517 Fragaria x ananassa HOM05D000073 ORTHO05D000033 6.3e-06 55.5 37 64.9
FAN27G1885 Fragaria x ananassa HOM05D000073 ORTHO05D000033 6.3e-06 55.5 37 64.9
ECA236G0276 Erigeron canadensis HOM05D000073 ORTHO05D000033 8.2e-06 55.1 37 70.3


User provided reference genes

Program Settings