Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12154 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 2.3e-111 405.6 205 100.0
Rhsim06G0168800 Rhododendron simsii HOM05D000172 ORTHO05D008216 8.7e-55 217.6 219 60.7
CSS0028035 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 3.1e-44 182.6 213 54.0
Actinidia13731 Actinidia chinensis HOM05D000172 ORTHO05D008216 1.0e-42 177.6 122 74.6
Hma1.2p1_2406F.1_g321460 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 1.3e-42 177.2 203 50.7
Hma1.2p1_0405F.1_g145530 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 2.2e-42 176.4 203 50.7
Dinv39759 Davidia involucrata HOM05D000172 ORTHO05D008216 8.5e-42 174.5 122 74.6
Nitab4.5_0000130g0110 Nicotiana tabacum HOM05D000172 ORTHO05D008216 1.5e-38 163.7 122 70.5
CAN.G784.10 Capsicum annuum HOM05D000172 ORTHO05D008216 2.6e-38 162.9 122 69.7
TAR624G1331 Trochodendron aralioides HOM05D000172 ORTHO05D008216 5.7e-38 161.8 122 68.0
Nitab4.5_0010117g0030 Nicotiana tabacum HOM05D000172 ORTHO05D008216 9.7e-38 161.0 122 69.7
Peaxi162Scf01333g00137 Petunia axillaris HOM05D000172 ORTHO05D008216 2.8e-37 159.5 122 68.9
PGSC0003DMG400000660 Solanum tuberosum HOM05D000172 ORTHO05D008216 2.8e-37 159.5 122 69.7
Nn1g03358 Nelumbo nucifera HOM05D000172 ORTHO05D008216 3.7e-37 159.1 122 66.4
Sopen07g024820 Solanum pennellii HOM05D000172 ORTHO05D008216 1.8e-36 156.8 120 70.0
MSTRG.14128 Avicennia marina HOM05D000172 ORTHO05D008216 3.1e-36 156.0 120 70.8
MBI16_g26181_MAGBIO Magnolia biondii HOM05D000172 ORTHO05D008216 7.7e-35 151.4 121 64.5
CANSAT78G2170 Cannabis sativa HOM05D000172 ORTHO05D000781 1.0e-34 151.0 115 63.5
Cfa014307 Carpinus fangiana HOM05D000172 ORTHO05D008216 1.3e-34 150.6 123 59.3
SGA_v2.0_scaffold49G18358 Striga asiatica HOM05D000172 ORTHO05D008216 1.3e-34 150.6 105 72.4
AUR62015120 Chenopodium quinoa HOM05D000172 ORTHO05D008216 5.0e-34 148.7 106 64.2
Thecc.01G183500 Theobroma cacao HOM05D000172 ORTHO05D008216 6.5e-34 148.3 122 62.3
Gohir.A07G168450 Gossypium hirsutum HOM05D000172 ORTHO05D008216 1.1e-33 147.5 122 63.1
Eucgr.K00733 Eucalyptus grandis HOM05D000172 ORTHO05D008216 1.5e-33 147.1 121 61.2
Sc12g0002040 Simmondsia chinensis HOM05D000172 ORTHO05D008216 1.9e-33 146.7 106 66.0
Duzib138G0791 Durio zibethinus HOM05D000172 ORTHO05D000781 2.5e-33 146.4 122 61.5
Prupe.3G209000 Prunus persica HOM05D000172 ORTHO05D008216 5.5e-33 145.2 122 57.4
Sabra14G0121300 Salix brachista HOM05D000172 ORTHO05D008216 5.5e-33 145.2 118 60.2
Aqoxy1G04174 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 9.4e-33 144.4 120 60.0
Migut.H01248 Erythranthe guttata HOM05D000172 ORTHO05D008216 9.4e-33 144.4 120 65.0
Cpa.g.sc132.32 Carica papaya HOM05D000172 ORTHO05D008216 1.2e-32 144.1 103 68.0
Gorai.001G195500 Gossypium raimondii HOM05D000172 ORTHO05D008216 1.2e-32 144.1 122 61.5
Manes.13G066180 Manihot esculenta HOM05D000172 ORTHO05D008216 1.2e-32 144.1 122 57.4
Gohir.D07G174800 Gossypium hirsutum HOM05D000172 ORTHO05D008216 1.6e-32 143.7 122 61.5
HanXRQChr04g0126831 Helianthus annuus HOM05D000172 ORTHO05D008216 1.6e-32 143.7 106 65.1
TWI36G0853 Tripterygium wilfordii HOM05D000172 ORTHO05D000781 1.6e-32 143.7 122 58.2
VMungo0647G0578 Vigna mungo HOM05D000172 ORTHO05D008216 2.1e-32 143.3 118 62.7
Potri.014G159600 Populus trichocarpa HOM05D000172 ORTHO05D008216 2.7e-32 142.9 118 61.0
QL08p030202 Quercus lobata HOM05D000172 ORTHO05D008216 2.7e-32 142.9 125 57.6
arahy.Tifrunner.gnm1.ann1.EDY71B Arachis hypogaea HOM05D000172 ORTHO05D008216 6.1e-32 141.7 121 59.5
MELO3C019724.2 Cucumis melo HOM05D000172 ORTHO05D008216 6.1e-32 141.7 122 59.8
MD09G1115500 Malus domestica HOM05D000172 ORTHO05D000781 6.1e-32 141.7 124 55.6
Sed0000051 Sechium edule HOM05D000172 ORTHO05D008216 6.1e-32 141.7 122 58.2
Lsat_1_v5_gn_7_94941 Lactuca sativa HOM05D000172 ORTHO05D008216 8.0e-32 141.4 103 65.0
Sed0027341 Sechium edule HOM05D000172 ORTHO05D008216 8.0e-32 141.4 122 59.0
MD17G1107300 Malus domestica HOM05D000172 ORTHO05D008216 1.0e-31 141.0 122 56.6
CDE04G1581 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 1.8e-31 140.2 111 64.0
COL.COLO4_06741 Corchorus olitorius HOM05D000172 ORTHO05D008216 2.3e-31 139.8 106 65.1
ClCG02G018130 Citrullus lanatus HOM05D000172 ORTHO05D008216 3.0e-31 139.4 122 60.7
DCAR_019254 Daucus carota HOM05D000172 ORTHO05D008216 3.0e-31 139.4 104 64.4
CsaV3_6G015520 Cucumis sativus L. HOM05D000172 ORTHO05D008216 4.0e-31 139.0 122 60.7
ATR1128G110 Amborella trichopoda HOM05D000172 ORTHO05D008216 5.2e-31 138.7 122 56.6
QL93p0185_0050 Quercus lobata HOM05D000172 ORTHO05D008216 5.2e-31 138.7 125 56.8
PGR142G2841 Punica granatum HOM05D000172 ORTHO05D008216 8.8e-31 137.9 105 61.9
SEGI_13182 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 1.2e-30 137.5 122 54.9
EL10Ac9g22821 Beta vulgaris HOM05D000172 ORTHO05D008216 1.5e-30 137.1 140 51.4
GSVIVG01030516001 Vitis vinifera HOM05D000172 ORTHO05D008216 2.6e-30 136.3 122 56.6
Cc05_g02620 Coffea canephora HOM05D000172 ORTHO05D008216 4.4e-30 135.6 122 58.2
Ciclev10016727m.g Citrus clementina HOM05D000172 ORTHO05D008216 7.5e-30 134.8 122 59.0
Phvul.008G214900 Phaseolus vulgaris HOM05D000172 ORTHO05D008216 9.7e-30 134.4 118 59.3
unitig_578.g16772 Utricularia gibba HOM05D000172 ORTHO05D008216 9.7e-30 134.4 120 61.7
Lalb_Chr17g0347191 Lupinus albus HOM05D000172 ORTHO05D008216 1.3e-29 134.0 118 59.3
Glyma.02G267200 Glycine max HOM05D000172 ORTHO05D008216 2.8e-29 132.9 117 59.8
RcHm_v2.0_Chr2g0157891 Rosa chinensis HOM05D000172 ORTHO05D008216 2.8e-29 132.9 124 52.4
LjContig00029g0008644 Lotus japonicus HOM05D000172 ORTHO05D008216 3.7e-29 132.5 123 56.9
HPP92_000210 Vanilla planifolia HOM05D000172 ORTHO05D008216 3.7e-29 132.5 103 62.1
HPP92_000219 Vanilla planifolia HOM05D000172 ORTHO05D008216 3.7e-29 132.5 103 62.1
THA.LOC104826130 Tarenaya hassleriana HOM05D000172 ORTHO05D008216 4.8e-29 132.1 122 55.7
Atru.chr6.3269 Acer truncatum HOM05D000172 ORTHO05D008216 8.2e-29 131.3 122 57.4
SalBow1G7277 Salvia bowleyana HOM05D000172 ORTHO05D008216 8.2e-29 131.3 128 57.8
Zm00001eb433230 Zea mays HOM05D000172 ORTHO05D008216 1.4e-28 130.6 106 53.8
Atru.chr6.3270 Acer truncatum HOM05D000172 ORTHO05D008216 2.4e-28 129.8 122 56.6
FAN14G3302 Fragaria x ananassa HOM05D000172 ORTHO05D008216 2.4e-28 129.8 126 50.8
FAN14G3681 Fragaria x ananassa HOM05D000172 ORTHO05D008216 2.4e-28 129.8 126 50.8
Medtr5g084980 Medicago truncatula HOM05D000172 ORTHO05D008216 2.4e-28 129.8 116 56.9
Os04g0669100 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D008216 4.1e-28 129.0 106 53.8
FvH4_6g41990 Fragaria vesca HOM05D000172 ORTHO05D008216 5.3e-28 128.6 126 50.0
PSO832G3827 Papaver somniferum HOM05D000172 ORTHO05D008216 5.3e-28 128.6 120 59.2
FAN05G3852 Fragaria x ananassa HOM05D000172 ORTHO05D008216 1.2e-27 127.5 126 49.2
PSO210G7646 Papaver somniferum HOM05D000172 ORTHO05D008216 1.2e-27 127.5 120 58.3
TPR.G25655 Trifolium pratense HOM05D000172 ORTHO05D008216 1.2e-27 127.5 104 56.7
Zm00001eb066900 Zea mays HOM05D000172 ORTHO05D008216 1.6e-27 127.1 106 51.9
FAN02G3472 Fragaria x ananassa HOM05D000172 ORTHO05D008216 2.0e-27 126.7 126 50.0
FAN09G4057 Fragaria x ananassa HOM05D000172 ORTHO05D000781 5.9e-27 125.2 104 51.9
arahy.Tifrunner.gnm1.ann1.YBUA9J Arachis hypogaea HOM05D000172 ORTHO05D008216 7.7e-27 124.8 100 58.0
AL1G14720 Arabidopsis lyrata HOM05D000172 ORTHO05D008216 1.0e-26 124.4 110 55.5
Sp1g03860 Schrenkiella parvula HOM05D000172 ORTHO05D008216 1.0e-26 124.4 110 55.5
Carub.0001s0423 Capsella rubella HOM05D000172 ORTHO05D008216 2.2e-26 123.2 110 54.5
Psat2g026560 Pisum sativum HOM05D000172 ORTHO05D008216 2.9e-26 122.9 104 56.7
Thhalv10008833m.g Eutrema salsugineum HOM05D000172 ORTHO05D008216 1.5e-25 120.6 110 52.7
Solyc07g049470.4 Solanum lycopersicum HOM05D000172 ORTHO05D008216 1.9e-25 120.2 88 70.5
arahy.Tifrunner.gnm1.ann1.Z24BKS Arachis hypogaea HOM05D000172 ORTHO05D008216 2.5e-25 119.8 105 55.2
CARHR004400 Cardamine hirsuta HOM05D000172 ORTHO05D008216 3.2e-25 119.4 117 53.0
arahy.Tifrunner.gnm1.ann1.2252MW Arachis hypogaea HOM05D000172 ORTHO05D008216 4.2e-25 119.0 104 54.8
ECA236G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.5e-25 118.6 106 55.7
BraA08t35564Z Brassica rapa HOM05D001534 ORTHO05D003503 6.1e-24 115.2 110 50.0
BcaB03g13463 Brassica carinata HOM05D000172 ORTHO05D008216 8.0e-24 114.8 110 49.1
BcaC07g36869 Brassica carinata HOM05D001534 ORTHO05D003503 1.0e-23 114.4 110 49.1
A08p36620 Brassica napus HOM05D001534 ORTHO05D003503 1.0e-23 114.4 110 49.1
C08p01620 Brassica napus HOM05D001534 ORTHO05D003503 1.0e-23 114.4 110 49.1
BolC8t46965H Brassica oleracea HOM05D001534 ORTHO05D003503 1.0e-23 114.4 110 49.1
arahy.Tifrunner.gnm1.ann1.YE9ADV Arachis hypogaea HOM05D000172 ORTHO05D008216 2.3e-23 113.2 85 61.2
DCAR_021133 Daucus carota HOM05D000172 ORTHO05D008216 5.7e-22 108.6 86 62.8
CBR_g23765 Chara braunii HOM05D000172 ORTHO05D008216 9.1e-20 101.3 108 50.0
Pp3c2_22540 Physcomitrium patens HOM05D000172 ORTHO05D008216 4.5e-19 99.0 103 48.5
arahy.Tifrunner.gnm1.ann1.R9GX0H Arachis hypogaea HOM05D000172 ORTHO05D008216 1.3e-18 97.4 83 55.4
arahy.Tifrunner.gnm1.ann1.J9YZDG Arachis hypogaea HOM05D000172 ORTHO05D008216 1.5e-17 94.0 90 52.2
SalBow1G5012 Salvia bowleyana HOM05D000172 ORTHO05D008216 2.8e-16 89.7 120 47.5
AagrBONN_evm.TU.Sc2ySwM_228.5805 Anthoceros agrestis HOM05D000172 ORTHO05D008216 3.0e-15 86.3 94 47.9
SMO111G0036 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 5.7e-14 82.0 96 44.8
SMO358G0556 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 5.7e-14 82.0 96 44.8
arahy.Tifrunner.gnm1.ann1.7XK0ZA Arachis hypogaea HOM05D000172 ORTHO05D008216 6.3e-13 78.6 70 51.4
Aa31LG1G19790 Aethionema arabicum HOM05D000172 ORTHO05D008216 1.4e-12 77.4 148 34.5
arahy.Tifrunner.gnm1.ann1.971VLJ Arachis hypogaea HOM05D000172 ORTHO05D008216 1.4e-12 77.4 127 36.2
arahy.Tifrunner.gnm1.ann1.J7SF2C Arachis hypogaea HOM05D000172 ORTHO05D008216 1.4e-12 77.4 70 52.9
CiPaw.03G154000 Carya illinoinensis HOM05D000172 ORTHO05D008216 1.8e-12 77.0 58 60.3
arahy.Tifrunner.gnm1.ann1.UD09X1 Arachis hypogaea HOM05D000172 ORTHO05D008216 2.4e-12 76.6 99 42.4
SEGI_22849 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 4.1e-12 75.9 62 59.7
Glyma.14G050300 Glycine max HOM05D000172 ORTHO05D008216 1.2e-11 74.3 62 59.7
Oeu003064.1 Olea europaea HOM05D000172 ORTHO05D008216 2.7e-11 73.2 52 65.4
arahy.Tifrunner.gnm1.ann1.XV84RB Arachis hypogaea HOM05D000172 ORTHO05D008216 3.8e-10 69.3 60 53.3
AT1G04985 Arabidopsis thaliana HOM05D000172 ORTHO05D008216 2.8e-08 63.2 60 51.7
DCAR_021134 Daucus carota HOM05D000172 ORTHO05D008216 8.0e-08 61.6 55 56.4
Hund04586 Selenicereus undatus HOM05D035355 ORTHO05D008216 4.0e-07 59.3 108 35.2
Hund04588 Selenicereus undatus HOM05D035355 ORTHO05D008216 4.0e-07 59.3 108 35.2


User provided reference genes

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