Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12139 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 4.4e-268 927.5 521 100.0
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.8e-163 578.9 340 88.8
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.2e-55 221.9 386 39.1
RhsimUnG0101600 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.7e-54 218.0 351 40.2
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 6.7e-51 206.1 320 40.3
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.7e-50 202.2 410 36.6
vmacro13356 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 7.7e-47 192.6 236 44.9
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.9e-46 190.7 454 37.2
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 6.1e-44 183.0 368 37.0
CSS0037204 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.1e-32 145.6 233 39.1
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.3e-32 143.3 223 39.5
CSS0047616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.3e-30 138.7 224 39.3
CSS0010902 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 9.4e-29 132.5 209 38.8
CSS0007178 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.6e-28 131.7 229 35.8
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.0e-22 112.5 309 29.8
vmacro14701 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.2e-20 105.5 197 33.5
vmacro14771 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.2e-20 105.5 197 33.5
Rhsim06G0220100 Rhododendron simsii HOM05D008549 ORTHO05D010234 5.2e-19 100.1 219 29.2
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 7.5e-18 96.3 342 26.0
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 9.8e-18 95.9 337 26.7
Rhsim07G0185300 Rhododendron simsii HOM05D000107 ORTHO05D003213 1.7e-17 95.1 99 55.6
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.7e-17 95.1 354 25.7
Rhsim10G0179100 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.4e-16 91.3 136 44.1
CSS0040020 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 3.1e-16 90.9 298 28.9
Rhsim11G0014100 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.4e-16 90.1 111 42.3
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.7e-15 87.8 310 25.5
CSS0041515 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.2e-14 84.7 136 41.9
Rhsim06G0049000 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.2e-14 84.7 323 30.3
VMungo0251G2604 Vigna mungo HOM05D008291 ORTHO05D003568 1.5e-13 82.0 277 27.8
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.5e-13 81.3 226 27.4
vmacro18985 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 2.5e-13 81.3 90 58.9
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.2e-13 80.5 315 26.3
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 9.4e-13 79.3 238 24.8
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-12 79.0 299 29.1
CSS0017527 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 6.1e-12 76.6 154 37.7
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 6.1e-12 76.6 265 23.8
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 8.0e-12 76.3 295 26.8
Rhsim06G0127000 Rhododendron simsii HOM05D009565 ORTHO05D012252 5.2e-11 73.6 292 25.0
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 8.8e-11 72.8 249 22.5
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 8.8e-11 72.8 332 23.8
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 1.5e-10 72.0 228 22.4
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 5.7e-10 70.1 251 22.3
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 3.7e-09 67.4 183 30.6
Peaxi162Scf00091g00169 Petunia axillaris HOM05D003120 ORTHO05D003568 1.1e-08 65.9 218 27.1
Dinv18594 Davidia involucrata HOM05D000791 ORTHO05D000669 2.4e-08 64.7 266 24.4
Hma1.2p1_0101F.1_g049380 Hydrangea macrophylla HOM05D005507 ORTHO05D009882 3.1e-08 64.3 238 25.6
vmacro03456 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 4.1e-08 63.9 90 53.3
Rhsim06G0048900 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.4e-08 63.5 333 28.5
RhsimUnG0068400 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.2e-08 62.8 154 30.5
RhsimUnG0134700 Rhododendron simsii HOM05D024557 ORTHO05D010234 9.2e-08 62.8 67 53.7
CSS0001367 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.6e-07 62.0 161 31.7
RhsimUnG0063900 Rhododendron simsii HOM05D024557 ORTHO05D010234 1.6e-07 62.0 67 53.7
Rhsim01G0183600 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.5e-07 60.8 156 36.5
CANSAT01G2686 Cannabis sativa HOM05D009677 ORTHO05D011883 7.7e-07 59.7 260 23.8
Peaxi162Scf00524g00083 Petunia axillaris HOM05D003120 ORTHO05D003568 1.0e-06 59.3 204 24.0
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.0e-06 59.3 222 27.0
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 2.3e-06 58.2 308 23.1
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 2.3e-06 58.2 322 19.6
CSS0011165 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.9e-06 57.8 74 44.6
CSS0019851 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.9e-06 57.8 74 44.6
CSS0027932 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.9e-06 57.8 79 29.1
CSS0048637 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 2.9e-06 57.8 71 43.7
vmacro12701 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 2.9e-06 57.8 110 31.8
Rhsim01G0102200 Rhododendron simsii HOM05D009565 ORTHO05D012252 5.0e-06 57.0 241 22.8
CSS0030614 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 8.6e-06 56.2 75 41.3
CSS0033294 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 8.6e-06 56.2 75 41.3
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 8.6e-06 56.2 257 23.3
Peaxi162Scf00085g00199 Petunia axillaris HOM05D003120 ORTHO05D003568 8.6e-06 56.2 204 23.5
Peaxi162Scf00250g00511 Petunia axillaris HOM05D003120 ORTHO05D003568 8.6e-06 56.2 204 23.5


User provided reference genes

Program Settings