Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 3.6e-106 388.3 196 100.0
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 5.5e-91 337.8 196 86.7
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 2.3e-89 332.4 194 83.0
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 1.1e-86 323.6 194 82.0
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 8.6e-84 313.9 194 80.9
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 1.2e-82 310.1 190 80.5
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 2.8e-82 308.9 195 77.4
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 2.8e-82 308.9 196 77.6
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 3.0e-81 305.4 196 76.0
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 5.2e-81 304.7 185 78.4
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 1.5e-80 303.1 196 76.0
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 2.0e-80 302.8 194 76.3
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 2.0e-80 302.8 196 75.0
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 3.4e-80 302.0 196 75.0
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 4.4e-80 301.6 196 74.5
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 1.7e-79 299.7 195 75.4
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 2.2e-79 299.3 194 75.8
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 2.9e-79 298.9 194 75.8
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 3.7e-79 298.5 196 75.0
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 3.7e-79 298.5 195 76.4
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 4.9e-79 298.1 192 76.0
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 6.4e-79 297.7 192 77.6
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 1.1e-78 297.0 196 75.0
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 5.4e-78 294.7 196 75.5
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 5.4e-78 294.7 196 74.0
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 7.0e-78 294.3 196 74.5
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 1.2e-77 293.5 196 74.0
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 2.0e-77 292.7 196 74.0
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 7.8e-77 290.8 196 73.5
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 3.9e-76 288.5 196 73.5
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 8.6e-76 287.3 170 86.5
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 1.5e-75 286.6 196 71.9
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 1.5e-75 286.6 196 73.0
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 3.3e-75 285.4 194 72.7
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 5.6e-75 284.6 194 70.1
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 1.2e-74 283.5 194 73.2
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 1.6e-74 283.1 184 75.5
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 2.1e-74 282.7 194 70.6
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 3.6e-74 282.0 194 72.2
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 3.6e-74 282.0 194 69.1
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 4.7e-74 281.6 190 73.7
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 8.0e-74 280.8 194 68.6
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 1.1e-73 280.4 190 72.6
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 1.1e-73 280.4 194 72.7
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 1.4e-73 280.0 180 76.7
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 1.8e-73 279.6 193 69.9
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 1.8e-73 279.6 169 81.1
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 3.1e-73 278.9 171 77.8
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 6.8e-73 277.7 195 70.8
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 1.2e-72 276.9 194 68.0
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 2.6e-72 275.8 194 72.7
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 3.4e-72 275.4 192 70.3
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 7.5e-72 274.2 183 71.0
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 9.8e-72 273.9 194 67.0
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 2.2e-71 272.7 182 73.6
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 2.9e-71 272.3 194 67.0
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 3.7e-71 271.9 194 68.0
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 8.3e-71 270.8 194 67.0
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 2.4e-70 269.2 194 68.0
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 5.4e-70 268.1 192 71.9
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 5.4e-70 268.1 181 72.4
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 7.0e-70 267.7 198 68.7
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 1.6e-69 266.5 179 72.6
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 1.6e-69 266.5 187 71.1
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 2.7e-69 265.8 194 67.5
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 1.3e-68 263.5 194 67.0
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 1.7e-68 263.1 195 66.2
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 1.1e-67 260.4 173 72.8
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 1.5e-67 260.0 194 66.5
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 1.9e-67 259.6 257 55.3
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 4.0e-65 251.9 266 54.5
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 8.9e-65 250.8 154 78.6
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 2.6e-64 249.2 143 83.2
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 2.6e-64 249.2 186 68.8
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 9.9e-64 247.3 172 71.5
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 7.1e-62 241.1 200 64.5
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 9.2e-62 240.7 149 77.9
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 1.0e-60 237.3 178 66.3
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 8.6e-60 234.2 196 63.3
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 9.5e-59 230.7 170 69.4
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 3.6e-58 228.8 343 41.7
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 1.8e-57 226.5 318 42.8
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 1.8e-57 226.5 318 42.8
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 6.4e-55 218.0 150 68.0
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 9.6e-51 204.1 185 55.7
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 8.1e-50 201.1 194 56.2
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 9.9e-48 194.1 255 51.0
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 2.9e-47 192.6 136 73.5
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 6.4e-47 191.4 136 70.6
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 3.2e-46 189.1 137 69.3
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 3.2e-46 189.1 170 55.3
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 5.6e-43 178.3 110 74.5
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 7.3e-43 177.9 133 66.2
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 8.1e-42 174.5 187 51.9
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 2.4e-38 162.9 121 66.1
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 5.1e-36 155.2 171 50.9
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 3.1e-33 146.0 291 33.7
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 4.2e-30 135.6 94 72.3
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 4.6e-29 132.1 82 70.7
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 5.1e-28 128.6 85 80.0
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 6.7e-20 101.7 107 49.5
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 1.1e-17 94.4 55 83.6
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 1.5e-16 90.5 164 36.6
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 7.7e-16 88.2 140 38.6
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 7.7e-16 88.2 71 64.8
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 1.3e-15 87.4 113 46.0
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 4.3e-11 72.4 41 80.5
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 4.3e-11 72.4 49 71.4
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 9.7e-11 71.2 95 46.3
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.7e-10 70.5 34 94.1


User provided reference genes

Program Settings