Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 2.7e-55 218.4 108 100.0
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 2.4e-43 178.7 98 86.7
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 6.3e-36 154.1 80 88.8
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 4.1e-35 151.4 99 71.7
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 5.3e-35 151.0 107 70.1
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 4.2e-32 141.4 108 66.7
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 7.2e-32 140.6 108 66.7
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 1.2e-31 139.8 96 67.7
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 4.6e-31 137.9 98 67.3
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 1.0e-30 136.7 101 66.3
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 5.1e-30 134.4 104 59.6
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 5.1e-30 134.4 100 62.0
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 6.7e-30 134.0 100 67.0
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 6.7e-30 134.0 100 63.0
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 1.5e-29 132.9 97 66.0
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 3.3e-29 131.7 102 64.7
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 3.3e-29 131.7 91 67.0
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 4.3e-29 131.3 102 63.7
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 5.7e-29 131.0 102 63.7
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 2.2e-28 129.0 98 63.3
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 2.2e-28 129.0 88 68.2
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 2.8e-28 128.6 110 59.1
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 4.8e-28 127.9 109 61.5
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 1.4e-27 126.3 88 67.0
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 1.4e-27 126.3 102 59.8
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 1.4e-27 126.3 100 63.0
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 1.8e-27 125.9 88 65.9
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 2.4e-27 125.6 102 59.8
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 3.1e-27 125.2 80 71.2
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 4.1e-27 124.8 89 66.3
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.2e-26 123.2 106 59.4
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 1.2e-26 123.2 101 60.4
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 1.2e-26 123.2 101 60.4
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 1.5e-26 122.9 102 54.9
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 1.5e-26 122.9 97 61.9
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 2.6e-26 122.1 86 65.1
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 3.4e-26 121.7 105 57.1
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 7.7e-26 120.6 98 56.1
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 1.3e-25 119.8 82 67.1
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 1.7e-25 119.4 102 54.9
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 2.2e-25 119.0 89 61.8
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 2.9e-25 118.6 105 57.1
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 3.8e-25 118.2 102 53.9
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 8.5e-25 117.1 93 54.8
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 1.4e-24 116.3 89 65.2
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 1.9e-24 115.9 95 56.8
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 1.9e-24 115.9 95 56.8
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 1.9e-24 115.9 94 61.7
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 1.9e-24 115.9 82 64.6
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 2.5e-24 115.5 91 63.7
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 2.5e-24 115.5 89 60.7
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 2.5e-24 115.5 89 60.7
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 2.5e-24 115.5 89 60.7
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 3.2e-24 115.2 103 59.2
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 3.2e-24 115.2 96 59.4
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 4.2e-24 114.8 89 60.7
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 4.2e-24 114.8 80 62.5
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 4.2e-24 114.8 85 61.2
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 4.2e-24 114.8 83 65.1
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 4.2e-24 114.8 97 60.8
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 4.2e-24 114.8 89 58.4
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 5.5e-24 114.4 102 50.0
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 7.2e-24 114.0 95 57.9
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 7.2e-24 114.0 74 70.3
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 7.2e-24 114.0 102 50.0
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 9.4e-24 113.6 100 58.0
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 9.4e-24 113.6 100 57.0
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 1.2e-23 113.2 87 62.1
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 1.2e-23 113.2 96 58.3
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 1.2e-23 113.2 101 54.5
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 1.2e-23 113.2 82 64.6
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 1.6e-23 112.8 102 50.0
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 1.6e-23 112.8 102 50.0
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 2.1e-23 112.5 82 63.4
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 2.1e-23 112.5 92 58.7
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 2.7e-23 112.1 84 61.9
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 2.7e-23 112.1 97 54.6
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 2.7e-23 112.1 73 67.1
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 2.7e-23 112.1 88 61.4
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 3.6e-23 111.7 89 59.6
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 3.6e-23 111.7 95 55.8
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 3.6e-23 111.7 96 57.3
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 6.1e-23 110.9 92 56.5
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 6.1e-23 110.9 83 60.2
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 6.1e-23 110.9 87 60.9
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 6.1e-23 110.9 87 60.9
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 6.1e-23 110.9 106 53.8
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 6.1e-23 110.9 95 58.9
GSVIVG01023542001 Vitis vinifera HOM05D006279 ORTHO05D008055 6.1e-23 110.9 96 56.2
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 7.9e-23 110.5 85 63.5
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 7.9e-23 110.5 98 55.1
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 7.9e-23 110.5 96 53.1
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 7.9e-23 110.5 107 52.3
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 1.0e-22 110.2 96 57.3
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 1.0e-22 110.2 83 60.2
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 1.0e-22 110.2 88 59.1
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 1.4e-22 109.8 90 56.7
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 1.8e-22 109.4 98 54.1
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 2.3e-22 109.0 98 53.1
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 2.3e-22 109.0 102 51.0
Eucgr.I00143 Eucalyptus grandis HOM05D006279 ORTHO05D008055 3.9e-22 108.2 70 68.6
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 5.1e-22 107.8 105 51.4
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 8.8e-22 107.1 102 47.1
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 8.8e-22 107.1 101 54.5
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 1.1e-21 106.7 105 51.4
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.1e-21 106.7 105 51.4
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 1.5e-21 106.3 101 53.5
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 2.0e-21 105.9 107 49.5
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 3.3e-21 105.1 100 51.0
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 3.3e-21 105.1 103 49.5
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 5.7e-21 104.4 102 52.9
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 1.3e-20 103.2 116 53.4
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 2.8e-20 102.1 84 60.7
MELO3C023226.2 Cucumis melo HOM05D006279 ORTHO05D008055 2.8e-20 102.1 89 52.8
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 1.1e-19 100.1 98 51.0
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 2.4e-19 99.0 105 47.6
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 1.5e-18 96.3 89 53.9
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 2.0e-18 95.9 86 47.7
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 4.5e-18 94.7 90 46.7
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 7.2e-16 87.4 59 64.4
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 3.6e-15 85.1 62 61.3
Sopen01g029410 Solanum pennellii HOM05D006279 ORTHO05D008055 1.1e-13 80.1 61 54.1
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 2.6e-13 79.0 70 50.0
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 2.4e-11 72.4 63 46.0
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 3.1e-11 72.0 76 46.1
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 5.9e-10 67.8 92 38.0
Hma1.2p1_4173F.1_g338420 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 5.5e-08 61.2 46 65.2
Oeu062074.1 Olea europaea HOM05D013196 ORTHO05D010523 4.7e-07 58.2 40 67.5


User provided reference genes

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