Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12005 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 3.1e-256 887.9 424 100.0
Rhsim04G0245000 Rhododendron simsii HOM05D019272 ORTHO05D020252 2.9e-113 412.9 429 54.3
Rhsim02G0133500 Rhododendron simsii HOM05D019272 ORTHO05D020252 3.7e-84 316.2 426 44.6
CSS0000622 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 1.7e-73 280.8 430 40.9
CSS0029958 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 1.1e-72 278.1 430 40.5
vmacro07839 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 9.9e-53 211.8 448 35.5
CSS0027577 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 2.7e-42 177.2 402 33.6
Rhsim04G0226100 Rhododendron simsii HOM05D015811 ORTHO05D014676 1.4e-17 95.1 265 30.2
QL08p063692 Quercus lobata HOM05D011274 ORTHO05D012136 2.2e-15 87.8 377 24.4
QL08p063661 Quercus lobata HOM05D011274 ORTHO05D012136 4.1e-14 83.6 371 24.3
Rhsim04G0227100 Rhododendron simsii HOM05D015811 ORTHO05D014676 4.1e-14 83.6 344 26.2
Rhsim04G0226600 Rhododendron simsii HOM05D015811 ORTHO05D014676 1.2e-13 82.0 246 28.9
Rhsim02G0161800 Rhododendron simsii HOM05D015811 ORTHO05D014676 1.5e-13 81.6 220 29.5
Rhsim02G0162400 Rhododendron simsii HOM05D015811 ORTHO05D014676 3.5e-13 80.5 262 27.5
Lj2P199T12 Lonicera japonica HOM05D021051 ORTHO05D012833 1.0e-12 79.0 209 29.7
QL07p010661 Quercus lobata HOM05D011274 ORTHO05D012136 1.0e-12 79.0 256 26.6
QL08p064279 Quercus lobata HOM05D011274 ORTHO05D012136 2.2e-12 77.8 364 22.3
Thecc.03G305700 Theobroma cacao HOM05D017991 ORTHO05D020493 6.5e-12 76.3 213 25.8
Ah.09g227600 Amaranthus hybridus HOM05D037678 ORTHO05D012136 8.5e-12 75.9 308 24.4
QL08p063682 Quercus lobata HOM05D011274 ORTHO05D012136 1.9e-11 74.7 290 24.5
AUR62032965 Chenopodium quinoa HOM05D037678 ORTHO05D012136 3.2e-11 73.9 263 24.7
QL10p018154 Quercus lobata HOM05D011274 ORTHO05D012136 3.2e-11 73.9 244 25.8
Rhsim04G0226700 Rhododendron simsii HOM05D015811 ORTHO05D014676 3.2e-11 73.9 239 27.2
RhsimUnG0050900 Rhododendron simsii HOM05D015811 ORTHO05D014676 4.2e-11 73.6 297 25.9
Rhsim02G0162000 Rhododendron simsii HOM05D015811 ORTHO05D014676 7.2e-11 72.8 239 27.6
COL.COLO4_16993 Corchorus olitorius HOM05D017991 ORTHO05D020493 1.2e-10 72.0 242 27.7
Ah.03g147960 Amaranthus hybridus HOM05D037678 ORTHO05D012136 6.1e-10 69.7 243 26.7
QL12p011282 Quercus lobata HOM05D011274 ORTHO05D012136 8.0e-10 69.3 262 24.8
Aqoxy7G03143 Aquilegia oxysepala HOM05D008418 ORTHO05D011146 1.4e-09 68.6 267 26.6
Lj5E258T0 Lonicera japonica HOM05D012292 ORTHO05D012234 2.3e-09 67.8 153 28.8
Prupe.5G157900 Prunus persica HOM05D013255 ORTHO05D011422 2.3e-09 67.8 277 24.5
Lj5A250G20 Lonicera japonica HOM05D012292 ORTHO05D012234 3.0e-09 67.4 208 27.4
COL.COLO4_16992 Corchorus olitorius HOM05D017991 ORTHO05D020493 5.2e-09 66.6 245 25.7
Lj5A253T37 Lonicera japonica HOM05D012292 ORTHO05D012234 6.7e-09 66.2 192 26.6
Prupe.5G179400 Prunus persica HOM05D007222 ORTHO05D010132 6.7e-09 66.2 289 22.8
QL08p045355 Quercus lobata HOM05D011274 ORTHO05D012136 8.8e-09 65.9 155 27.1
Dinv24224 Davidia involucrata HOM05D015193 ORTHO05D005682 2.6e-08 64.3 253 26.5
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 9.7e-08 62.4 203 26.1
Lj5P260T19 Lonicera japonica HOM05D012292 ORTHO05D012234 1.3e-07 62.0 148 33.8
Cc06_g12930 Coffea canephora HOM05D015193 ORTHO05D005682 1.1e-06 58.9 154 24.7
Dinv24217 Davidia involucrata HOM05D003963 ORTHO05D004558 1.1e-06 58.9 152 30.3
Lj5P564T10 Lonicera japonica HOM05D012292 ORTHO05D012234 1.8e-06 58.2 131 29.8
Lju3917C0T1 Lonicera japonica HOM05D012292 ORTHO05D012234 1.8e-06 58.2 141 31.2
Lj5C264T5 Lonicera japonica HOM05D012292 ORTHO05D012234 3.1e-06 57.4 141 31.2
QL08p064561 Quercus lobata HOM05D011274 ORTHO05D012136 4.1e-06 57.0 214 24.3
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.3e-06 56.6 216 24.1
COL.COLO4_31293 Corchorus olitorius HOM05D001422 ORTHO05D001321 7.0e-06 56.2 189 28.0
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 7.0e-06 56.2 216 24.1


User provided reference genes

Program Settings