Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11938 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.8e-133 479.2 233 100.0
vmacro11939 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 5.6e-106 387.9 297 70.7
vmacro23465 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 5.6e-106 387.9 297 70.7
Rhsim06G0207800 Rhododendron simsii HOM05D000718 ORTHO05D007431 1.3e-99 366.7 297 66.7
vmacro23384 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.2e-97 360.1 241 78.0
CSS0021542 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 7.8e-92 340.9 301 61.1
Dinv18364 Davidia involucrata HOM05D000718 ORTHO05D007431 6.6e-91 337.8 305 59.7
CSS0043856 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 1.2e-89 333.6 237 73.0
vmacro11937 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.8e-88 329.7 304 60.9
Lj1A829G32 Lonicera japonica HOM05D000718 ORTHO05D007431 4.1e-85 318.5 302 57.6
CSS0014195 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 2.7e-84 315.8 297 58.6
Actinidia12577 Actinidia chinensis HOM05D000718 ORTHO05D007431 3.0e-83 312.4 301 55.8
Solyc07g062450.3 Solanum lycopersicum HOM05D000718 ORTHO05D007431 5.1e-83 311.6 301 56.1
PGSC0003DMG400007071 Solanum tuberosum HOM05D000718 ORTHO05D007431 5.1e-83 311.6 301 56.5
CAN.G375.14 Capsicum annuum HOM05D000718 ORTHO05D007431 8.6e-83 310.8 301 55.5
Peaxi162Scf00111g01475 Petunia axillaris HOM05D000718 ORTHO05D007431 1.1e-82 310.5 299 56.2
Sopen07g030690 Solanum pennellii HOM05D000718 ORTHO05D007431 3.3e-82 308.9 301 55.8
Nitab4.5_0006953g0050 Nicotiana tabacum HOM05D000718 ORTHO05D007431 1.2e-81 307.0 301 55.8
Nitab4.5_0003565g0040 Nicotiana tabacum HOM05D000718 ORTHO05D007431 1.6e-81 306.6 301 55.5
PGR031G2045 Punica granatum HOM05D000718 ORTHO05D007431 2.8e-81 305.8 303 56.4
Cc05_g11090 Coffea canephora HOM05D000718 ORTHO05D007431 1.8e-80 303.1 303 56.4
COL.COLO4_17547 Corchorus olitorius HOM05D000718 ORTHO05D007431 4.0e-80 302.0 322 54.0
Ciclev10021305m.g Citrus clementina HOM05D000718 ORTHO05D007431 2.0e-79 299.7 303 55.8
Haze_09324 Corylus avellana HOM05D000718 ORTHO05D007431 2.0e-79 299.7 321 53.0
SalBow7G4178 Salvia bowleyana HOM05D000718 ORTHO05D007431 2.0e-79 299.7 303 54.1
RcHm_v2.0_Chr5g0030941 Rosa chinensis HOM05D000718 ORTHO05D007431 2.6e-79 299.3 301 54.5
EL10Ac4g08344 Beta vulgaris HOM05D000718 ORTHO05D007431 5.8e-79 298.1 304 53.9
SalBow7G4376 Salvia bowleyana HOM05D000718 ORTHO05D007431 5.8e-79 298.1 303 53.8
Ah.04g164270 Amaranthus hybridus HOM05D000718 ORTHO05D007431 1.7e-78 296.6 304 54.6
Prupe.4G164800 Prunus persica HOM05D000718 ORTHO05D007431 1.7e-78 296.6 304 53.3
Migut.H01998 Erythranthe guttata HOM05D000718 ORTHO05D007431 2.2e-78 296.2 306 54.2
Potri.001G390700 Populus trichocarpa HOM05D000718 ORTHO05D007431 2.9e-78 295.8 302 55.0
CiPaw.11G160400 Carya illinoinensis HOM05D000718 ORTHO05D007431 3.8e-78 295.4 306 54.2
DCAR_013156 Daucus carota HOM05D000718 ORTHO05D007431 4.9e-78 295.0 302 56.0
MD03G1243500 Malus domestica HOM05D000718 ORTHO05D007431 4.9e-78 295.0 302 53.6
FvH4_3g18310 Fragaria vesca HOM05D000718 ORTHO05D007431 8.4e-78 294.3 297 54.5
Lj3g0001987 Lotus japonicus HOM05D000718 ORTHO05D007431 1.1e-77 293.9 307 53.1
Nn1g09174 Nelumbo nucifera HOM05D000718 ORTHO05D007431 1.1e-77 293.9 308 56.2
TWI39G0589 Tripterygium wilfordii HOM05D000718 ORTHO05D007431 1.1e-77 293.9 304 53.6
Aqoxy4G00321 Aquilegia oxysepala HOM05D000718 ORTHO05D007431 2.4e-77 292.7 304 53.0
Gorai.002G054700 Gossypium raimondii HOM05D000718 ORTHO05D007431 2.4e-77 292.7 308 54.2
THA.LOC104822564 Tarenaya hassleriana HOM05D000718 ORTHO05D007431 2.4e-77 292.7 305 54.8
Gohir.A01G054400 Gossypium hirsutum HOM05D000718 ORTHO05D007431 3.2e-77 292.4 308 54.2
Atru.chr2.2147 Acer truncatum HOM05D000718 ORTHO05D007431 5.4e-77 291.6 303 54.5
Gohir.D01G042724 Gossypium hirsutum HOM05D000718 ORTHO05D007431 7.1e-77 291.2 308 53.9
CANSAT35G0289 Cannabis sativa HOM05D000718 ORTHO05D007431 9.2e-77 290.8 304 54.6
FAN25G1161 Fragaria x ananassa HOM05D000718 ORTHO05D007431 1.6e-76 290.0 297 54.2
Oeu025333.1 Olea europaea HOM05D000718 ORTHO05D007431 1.6e-76 290.0 298 53.7
Hund02254 Selenicereus undatus HOM05D000718 ORTHO05D007431 2.1e-76 289.7 299 53.5
QL08p026242 Quercus lobata HOM05D000718 ORTHO05D007431 2.7e-76 289.3 318 51.6
FAN16G1727 Fragaria x ananassa HOM05D000718 ORTHO05D007431 4.6e-76 288.5 306 52.6
ECA240G1747 Erigeron canadensis HOM05D000718 ORTHO05D007431 6.0e-76 288.1 298 52.7
TPR.G16488 Trifolium pratense HOM05D000718 ORTHO05D007431 7.8e-76 287.7 305 52.5
Glyma.12G157600 Glycine max HOM05D000718 ORTHO05D007431 2.3e-75 286.2 304 52.0
arahy.Tifrunner.gnm1.ann1.6IHZ0U Arachis hypogaea HOM05D000718 ORTHO05D007431 3.0e-75 285.8 307 51.8
AUR62042779 Chenopodium quinoa HOM05D000718 ORTHO05D007431 3.0e-75 285.8 318 51.6
Lsat_1_v5_gn_9_99900 Lactuca sativa HOM05D000718 ORTHO05D007431 5.1e-75 285.0 296 52.7
AL3G27230 Arabidopsis lyrata HOM05D000718 ORTHO05D007431 6.6e-75 284.6 305 53.1
Cfa019567 Carpinus fangiana HOM05D000718 ORTHO05D007431 8.6e-75 284.3 292 54.5
Psat0s1037g0040 Pisum sativum HOM05D000718 ORTHO05D007431 8.6e-75 284.3 310 52.3
CARHR089850 Cardamine hirsuta HOM05D000718 ORTHO05D007431 1.1e-74 283.9 305 52.8
PSO782G3001 Papaver somniferum HOM05D000718 ORTHO05D007431 1.1e-74 283.9 297 53.2
Thhalv10020708m.g Eutrema salsugineum HOM05D000718 ORTHO05D007431 1.9e-74 283.1 305 53.4
arahy.Tifrunner.gnm1.ann1.STN4DM Arachis hypogaea HOM05D000718 ORTHO05D007431 2.5e-74 282.7 302 52.6
BolC5t33913H Brassica oleracea HOM05D000718 ORTHO05D007431 2.5e-74 282.7 305 52.8
Medtr8g464030 Medicago truncatula HOM05D000718 ORTHO05D007431 3.3e-74 282.3 339 48.4
SGA_v2.0_scaffold130G34293 Striga asiatica HOM05D000718 ORTHO05D007431 3.3e-74 282.3 293 54.3
AT3G14910 Arabidopsis thaliana HOM05D000718 ORTHO05D007431 4.3e-74 282.0 305 52.5
Carub.0003s1457 Capsella rubella HOM05D000718 ORTHO05D007431 4.3e-74 282.0 305 52.5
Ca_12194_v3 Cicer arietinum L. HOM05D000718 ORTHO05D007431 4.3e-74 282.0 305 51.8
Sc16g0007570 Simmondsia chinensis HOM05D000718 ORTHO05D007431 5.6e-74 281.6 302 53.3
PSO478G1672 Papaver somniferum HOM05D000718 ORTHO05D007431 2.1e-73 279.6 297 52.5
FAN11G0057 Fragaria x ananassa HOM05D000718 ORTHO05D007431 3.6e-73 278.9 297 53.5
Glyma.06G228900 Glycine max HOM05D000718 ORTHO05D007431 4.7e-73 278.5 304 51.6
A05p34500 Brassica napus HOM05D000718 ORTHO05D007431 8.9e-72 274.2 299 52.2
BraA05t22270Z Brassica rapa HOM05D000718 ORTHO05D007431 8.9e-72 274.2 299 52.2
HanXRQChr15g0476211 Helianthus annuus HOM05D000718 ORTHO05D007431 1.2e-71 273.9 302 51.3
BcaB06g25332 Brassica carinata HOM05D000718 ORTHO05D007431 2.2e-70 269.6 296 53.0
MBI07_g09566_MAGBIO Magnolia biondii HOM05D000718 ORTHO05D007431 8.4e-70 267.7 352 45.2
Phvul.011G162200 Phaseolus vulgaris HOM05D000718 ORTHO05D007431 1.9e-69 266.5 308 49.0
Aa31LG8G2120 Aethionema arabicum HOM05D000718 ORTHO05D007431 1.2e-68 263.8 299 50.2
Zm00001eb309730 Zea mays HOM05D000718 ORTHO05D007431 2.7e-68 262.7 301 48.8
Os09g0315800 Oryza sativa ssp. japonica HOM05D000718 ORTHO05D007431 1.0e-67 260.8 301 49.5
CDE04G1093 Ceratophyllum demersum HOM05D000718 ORTHO05D007431 1.7e-67 260.0 298 47.0
unitig_52.g17395 Utricularia gibba HOM05D000718 ORTHO05D007431 4.8e-65 251.9 301 45.8
Nn1g04439 Nelumbo nucifera HOM05D000718 ORTHO05D007431 4.0e-64 248.8 270 52.2
HPP92_023429 Vanilla planifolia HOM05D000718 ORTHO05D007431 5.8e-63 245.0 301 46.5
GSVIVG01014199001 Vitis vinifera HOM05D000718 ORTHO05D007431 9.9e-63 244.2 165 78.2
C05p52240 Brassica napus HOM05D000718 ORTHO05D007431 4.9e-62 241.9 286 49.7
Thecc.07G114900 Theobroma cacao HOM05D000718 ORTHO05D007431 7.9e-60 234.6 165 75.2
Duzib187G1570 Durio zibethinus HOM05D000718 ORTHO05D007431 3.9e-59 232.3 168 73.8
Eucgr.K01884 Eucalyptus grandis HOM05D000718 ORTHO05D007431 8.7e-59 231.1 159 74.2
Lalb_Chr03g0031171 Lupinus albus HOM05D000718 ORTHO05D007431 4.3e-58 228.8 162 72.8
Sed0007644 Sechium edule HOM05D000718 ORTHO05D007431 6.2e-57 224.9 163 71.2
Lalb_Chr01g0006831 Lupinus albus HOM05D000718 ORTHO05D007431 5.3e-56 221.9 162 71.0
ClCG11G017460 Citrullus lanatus HOM05D000718 ORTHO05D007431 6.9e-56 221.5 162 71.6
MELO3C025639.2 Cucumis melo HOM05D000718 ORTHO05D007431 6.9e-56 221.5 163 71.8
Manes.03G101200 Manihot esculenta HOM05D000718 ORTHO05D007431 4.2e-53 212.2 248 50.0
FAN21G3716 Fragaria x ananassa HOM05D000718 ORTHO05D007431 3.5e-52 209.1 252 48.4
ATR0602G196 Amborella trichopoda HOM05D000718 ORTHO05D007431 5.1e-51 205.3 168 65.5
SEGI_16322 Sequoiadendron giganteum HOM05D000718 ORTHO05D007431 1.5e-50 203.8 302 39.1
MD11G1263600 Malus domestica HOM05D000718 ORTHO05D007431 5.6e-50 201.8 243 47.7
BcaB06g29518 Brassica carinata HOM05D000718 ORTHO05D002712 2.1e-49 199.9 254 50.8
VMungo1127G0879 Vigna mungo HOM05D000718 ORTHO05D007431 6.5e-46 188.3 255 45.1
AagrBONN_evm.TU.Sc2ySwM_228.1801 Anthoceros agrestis HOM05D000718 ORTHO05D007431 2.2e-38 163.3 284 35.9
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 3.8e-38 162.5 219 44.3
SMO367G0522 Selaginella moellendorffii HOM05D000718 ORTHO05D007431 3.9e-35 152.5 274 36.5
Pp3c4_25540 Physcomitrium patens HOM05D000718 ORTHO05D007431 7.7e-31 138.3 296 31.1
SHI27609 Sapria himalayana HOM05D000718 ORTHO05D007431 7.7e-31 138.3 213 40.8
Mapoly0061s0004 Marchantia polymorpha HOM05D000718 ORTHO05D007431 2.5e-29 133.3 164 42.7
Psat4g090840 Pisum sativum HOM05D000718 ORTHO05D007431 5.5e-29 132.1 133 58.6
AUR62019575 Chenopodium quinoa HOM05D000718 ORTHO05D007431 6.7e-27 125.2 101 67.3
Thecc.07G114700 Theobroma cacao HOM05D000718 ORTHO05D007431 4.4e-26 122.5 99 69.7
CsaV3_4G033110 Cucumis sativus L. HOM05D000718 ORTHO05D007431 5.2e-19 99.0 73 58.9
Sp3g13120 Schrenkiella parvula HOM05D000718 ORTHO05D007431 2.6e-18 96.7 68 63.2
Hund02252 Selenicereus undatus HOM05D000718 ORTHO05D007431 2.6e-18 96.7 103 58.3
MSTRG.14233 Avicennia marina HOM05D000718 ORTHO05D007431 7.2e-13 78.6 66 56.1
Psat3g077000 Pisum sativum HOM05D000718 ORTHO05D007431 9.4e-13 78.2 66 51.5
Lsat_1_v5_gn_9_99920 Lactuca sativa HOM05D000718 ORTHO05D007431 2.1e-12 77.0 54 74.1
Thecc.07G114100 Theobroma cacao HOM05D000718 ORTHO05D007431 4.1e-08 62.8 30 96.7
CBR_g49411 Chara braunii HOM05D000019 ORTHO05D000353 5.9e-07 58.9 56 44.6


User provided reference genes

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