Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11937 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 7.4e-189 663.7 330 100.0
vmacro11939 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 2.4e-139 499.2 331 79.2
vmacro23465 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 2.4e-139 499.2 331 79.2
vmacro23384 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.7e-129 466.5 330 74.2
Rhsim06G0207800 Rhododendron simsii HOM05D000718 ORTHO05D007431 4.7e-127 458.4 328 74.7
COL.COLO4_17547 Corchorus olitorius HOM05D000718 ORTHO05D007431 6.0e-122 441.4 333 69.4
CSS0021542 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 1.5e-120 436.8 331 70.1
Actinidia12577 Actinidia chinensis HOM05D000718 ORTHO05D007431 9.0e-118 427.6 319 69.9
Dinv18364 Davidia involucrata HOM05D000718 ORTHO05D007431 4.4e-117 425.2 334 68.0
QL08p026242 Quercus lobata HOM05D000718 ORTHO05D007431 1.9e-115 419.9 335 65.7
AUR62042779 Chenopodium quinoa HOM05D000718 ORTHO05D007431 3.9e-113 412.1 335 65.1
GSVIVG01014199001 Vitis vinifera HOM05D000718 ORTHO05D007431 5.1e-113 411.8 335 67.2
Thecc.07G114900 Theobroma cacao HOM05D000718 ORTHO05D007431 6.2e-111 404.8 333 65.2
Duzib187G1570 Durio zibethinus HOM05D000718 ORTHO05D007431 1.1e-110 404.1 333 65.2
Atru.chr2.2147 Acer truncatum HOM05D000718 ORTHO05D007431 1.4e-110 403.7 334 65.3
Lj1A829G32 Lonicera japonica HOM05D000718 ORTHO05D007431 1.8e-110 403.3 335 64.5
FAN16G1727 Fragaria x ananassa HOM05D000718 ORTHO05D007431 4.5e-109 398.7 329 63.8
Ciclev10021305m.g Citrus clementina HOM05D000718 ORTHO05D007431 5.8e-109 398.3 334 64.7
CSS0014195 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 6.4e-108 394.8 302 69.5
RcHm_v2.0_Chr5g0030941 Rosa chinensis HOM05D000718 ORTHO05D007431 8.4e-108 394.4 329 63.5
Lj3g0001987 Lotus japonicus HOM05D000718 ORTHO05D007431 1.1e-107 394.0 333 62.5
CANSAT35G0289 Cannabis sativa HOM05D000718 ORTHO05D007431 2.4e-107 392.9 334 65.6
Prupe.4G164800 Prunus persica HOM05D000718 ORTHO05D007431 2.4e-107 392.9 334 62.3
MD03G1243500 Malus domestica HOM05D000718 ORTHO05D007431 7.1e-107 391.3 332 63.3
PGR031G2045 Punica granatum HOM05D000718 ORTHO05D007431 1.6e-106 390.2 335 64.2
arahy.Tifrunner.gnm1.ann1.6IHZ0U Arachis hypogaea HOM05D000718 ORTHO05D007431 4.6e-106 388.7 333 61.6
THA.LOC104822564 Tarenaya hassleriana HOM05D000718 ORTHO05D007431 6.0e-106 388.3 336 62.8
Gorai.002G054700 Gossypium raimondii HOM05D000718 ORTHO05D007431 1.0e-105 387.5 333 64.0
Eucgr.K01884 Eucalyptus grandis HOM05D000718 ORTHO05D007431 1.3e-105 387.1 330 64.8
FvH4_3g18310 Fragaria vesca HOM05D000718 ORTHO05D007431 1.3e-105 387.1 329 62.3
Solyc07g062450.3 Solanum lycopersicum HOM05D000718 ORTHO05D007431 1.3e-105 387.1 332 62.3
PGSC0003DMG400007071 Solanum tuberosum HOM05D000718 ORTHO05D007431 1.3e-105 387.1 332 62.7
DCAR_013156 Daucus carota HOM05D000718 ORTHO05D007431 1.8e-105 386.7 337 63.2
Gohir.A01G054400 Gossypium hirsutum HOM05D000718 ORTHO05D007431 1.8e-105 386.7 333 64.0
TWI39G0589 Tripterygium wilfordii HOM05D000718 ORTHO05D007431 1.8e-105 386.7 332 63.0
TPR.G16488 Trifolium pratense HOM05D000718 ORTHO05D007431 2.3e-105 386.3 333 61.9
Gohir.D01G042724 Gossypium hirsutum HOM05D000718 ORTHO05D007431 3.0e-105 386.0 333 63.7
Nitab4.5_0003565g0040 Nicotiana tabacum HOM05D000718 ORTHO05D007431 3.0e-105 386.0 332 62.0
CiPaw.11G160400 Carya illinoinensis HOM05D000718 ORTHO05D007431 3.9e-105 385.6 336 62.8
Potri.001G390700 Populus trichocarpa HOM05D000718 ORTHO05D007431 6.7e-105 384.8 335 63.0
arahy.Tifrunner.gnm1.ann1.STN4DM Arachis hypogaea HOM05D000718 ORTHO05D007431 8.7e-105 384.4 328 62.2
Sopen07g030690 Solanum pennellii HOM05D000718 ORTHO05D007431 8.7e-105 384.4 332 62.0
Ca_12194_v3 Cicer arietinum L. HOM05D000718 ORTHO05D007431 1.1e-104 384.0 333 61.3
Nitab4.5_0006953g0050 Nicotiana tabacum HOM05D000718 ORTHO05D007431 1.5e-104 383.6 332 62.3
Oeu025333.1 Olea europaea HOM05D000718 ORTHO05D007431 1.5e-104 383.6 329 62.6
Ah.04g164270 Amaranthus hybridus HOM05D000718 ORTHO05D007431 2.5e-104 382.9 335 63.0
CAN.G375.14 Capsicum annuum HOM05D000718 ORTHO05D007431 9.6e-104 380.9 332 60.8
FAN25G1161 Fragaria x ananassa HOM05D000718 ORTHO05D007431 9.6e-104 380.9 329 62.0
Lalb_Chr03g0031171 Lupinus albus HOM05D000718 ORTHO05D007431 2.1e-103 379.8 334 61.1
Psat0s1037g0040 Pisum sativum HOM05D000718 ORTHO05D007431 4.8e-103 378.6 334 61.7
Aqoxy4G00321 Aquilegia oxysepala HOM05D000718 ORTHO05D007431 6.2e-103 378.3 334 60.2
Cc05_g11090 Coffea canephora HOM05D000718 ORTHO05D007431 6.2e-103 378.3 334 62.3
Haze_09324 Corylus avellana HOM05D000718 ORTHO05D007431 6.2e-103 378.3 352 60.8
SalBow7G4178 Salvia bowleyana HOM05D000718 ORTHO05D007431 8.1e-103 377.9 334 60.8
SalBow7G4376 Salvia bowleyana HOM05D000718 ORTHO05D007431 8.1e-103 377.9 334 60.8
Hund02254 Selenicereus undatus HOM05D000718 ORTHO05D007431 8.1e-103 377.9 330 62.7
Glyma.12G157600 Glycine max HOM05D000718 ORTHO05D007431 1.1e-102 377.5 333 60.4
Peaxi162Scf00111g01475 Petunia axillaris HOM05D000718 ORTHO05D007431 1.1e-102 377.5 330 60.9
SGA_v2.0_scaffold130G34293 Striga asiatica HOM05D000718 ORTHO05D007431 2.4e-102 376.3 324 63.6
AT3G14910 Arabidopsis thaliana HOM05D000718 ORTHO05D007431 3.1e-102 375.9 335 61.5
Sed0007644 Sechium edule HOM05D000718 ORTHO05D007431 3.1e-102 375.9 333 61.0
Thhalv10020708m.g Eutrema salsugineum HOM05D000718 ORTHO05D007431 4.0e-102 375.6 335 61.8
EL10Ac4g08344 Beta vulgaris HOM05D000718 ORTHO05D007431 6.9e-102 374.8 335 60.9
ClCG11G017460 Citrullus lanatus HOM05D000718 ORTHO05D007431 6.9e-102 374.8 333 60.7
Carub.0003s1457 Capsella rubella HOM05D000718 ORTHO05D007431 9.0e-102 374.4 335 60.9
MBI07_g09566_MAGBIO Magnolia biondii HOM05D000718 ORTHO05D007431 1.2e-101 374.0 378 55.0
CARHR089850 Cardamine hirsuta HOM05D000718 ORTHO05D007431 1.5e-101 373.6 335 62.4
ECA240G1747 Erigeron canadensis HOM05D000718 ORTHO05D007431 3.4e-101 372.5 329 60.5
AL3G27230 Arabidopsis lyrata HOM05D000718 ORTHO05D007431 4.5e-101 372.1 335 60.9
BolC5t33913H Brassica oleracea HOM05D000718 ORTHO05D007431 5.8e-101 371.7 335 60.9
MELO3C025639.2 Cucumis melo HOM05D000718 ORTHO05D007431 5.8e-101 371.7 334 60.5
FAN11G0057 Fragaria x ananassa HOM05D000718 ORTHO05D007431 5.8e-101 371.7 329 61.4
Glyma.06G228900 Glycine max HOM05D000718 ORTHO05D007431 7.6e-101 371.3 332 60.8
Migut.H01998 Erythranthe guttata HOM05D000718 ORTHO05D007431 1.0e-100 370.9 337 59.9
Medtr8g464030 Medicago truncatula HOM05D000718 ORTHO05D007431 1.3e-100 370.5 370 55.7
Lsat_1_v5_gn_9_99900 Lactuca sativa HOM05D000718 ORTHO05D007431 8.4e-100 367.9 325 60.3
Nn1g09174 Nelumbo nucifera HOM05D000718 ORTHO05D007431 8.4e-100 367.9 306 65.0
Lalb_Chr01g0006831 Lupinus albus HOM05D000718 ORTHO05D007431 7.1e-99 364.8 333 58.9
PSO782G3001 Papaver somniferum HOM05D000718 ORTHO05D007431 9.3e-99 364.4 333 59.5
Aa31LG8G2120 Aethionema arabicum HOM05D000718 ORTHO05D007431 1.6e-98 363.6 328 61.0
Phvul.011G162200 Phaseolus vulgaris HOM05D000718 ORTHO05D007431 2.1e-98 363.2 333 58.0
Cfa019567 Carpinus fangiana HOM05D000718 ORTHO05D007431 2.7e-98 362.8 323 61.9
A05p34500 Brassica napus HOM05D000718 ORTHO05D007431 4.6e-98 362.1 329 60.2
BraA05t22270Z Brassica rapa HOM05D000718 ORTHO05D007431 4.6e-98 362.1 329 60.2
HanXRQChr15g0476211 Helianthus annuus HOM05D000718 ORTHO05D007431 7.9e-98 361.3 331 58.0
CDE04G1093 Ceratophyllum demersum HOM05D000718 ORTHO05D007431 3.0e-97 359.4 330 56.1
Os09g0315800 Oryza sativa ssp. japonica HOM05D000718 ORTHO05D007431 3.0e-97 359.4 333 58.6
Zm00001eb309730 Zea mays HOM05D000718 ORTHO05D007431 5.1e-97 358.6 333 58.6
PSO478G1672 Papaver somniferum HOM05D000718 ORTHO05D007431 1.1e-96 357.5 333 58.6
BcaB06g25332 Brassica carinata HOM05D000718 ORTHO05D007431 1.5e-96 357.1 326 60.7
Sc16g0007570 Simmondsia chinensis HOM05D000718 ORTHO05D007431 4.3e-96 355.5 309 62.8
HPP92_023429 Vanilla planifolia HOM05D000718 ORTHO05D007431 4.8e-95 352.1 332 58.1
CSS0043856 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 9.0e-94 347.8 330 58.5
ATR0602G196 Amborella trichopoda HOM05D000718 ORTHO05D007431 7.9e-90 334.7 336 54.5
C05p52240 Brassica napus HOM05D000718 ORTHO05D007431 1.3e-89 334.0 316 59.5
Nn1g04439 Nelumbo nucifera HOM05D000718 ORTHO05D007431 5.1e-89 332.0 300 60.7
vmacro11938 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 8.7e-89 331.3 304 60.9
unitig_52.g17395 Utricularia gibba HOM05D000718 ORTHO05D007431 1.0e-84 317.8 332 52.1
AUR62019575 Chenopodium quinoa HOM05D000718 ORTHO05D007431 3.6e-82 309.3 287 59.6
Manes.03G101200 Manihot esculenta HOM05D000718 ORTHO05D007431 1.4e-81 307.4 275 61.8
FAN21G3716 Fragaria x ananassa HOM05D000718 ORTHO05D007431 4.3e-80 302.4 284 57.7
MD11G1263600 Malus domestica HOM05D000718 ORTHO05D007431 6.3e-79 298.5 273 59.7
VMungo1127G0879 Vigna mungo HOM05D000718 ORTHO05D007431 1.8e-78 297.0 281 57.7
SEGI_16322 Sequoiadendron giganteum HOM05D000718 ORTHO05D007431 2.3e-73 280.0 328 45.1
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 1.6e-66 257.3 269 54.6
BcaB06g29518 Brassica carinata HOM05D000718 ORTHO05D002712 1.5e-64 250.8 282 53.5
Psat4g090840 Pisum sativum HOM05D000718 ORTHO05D007431 2.0e-56 223.8 263 52.5
AagrBONN_evm.TU.Sc2ySwM_228.1801 Anthoceros agrestis HOM05D000718 ORTHO05D007431 9.8e-56 221.5 293 41.3
SMO367G0522 Selaginella moellendorffii HOM05D000718 ORTHO05D007431 7.0e-54 215.3 283 43.5
SHI27609 Sapria himalayana HOM05D000718 ORTHO05D007431 3.2e-51 206.5 269 45.0
Thecc.07G114700 Theobroma cacao HOM05D000718 ORTHO05D007431 4.2e-51 206.1 175 66.3
Pp3c4_25540 Physcomitrium patens HOM05D000718 ORTHO05D007431 4.9e-47 192.6 338 33.7
Mapoly0061s0004 Marchantia polymorpha HOM05D000718 ORTHO05D007431 1.0e-44 184.9 341 34.3
CsaV3_4G033110 Cucumis sativus L. HOM05D000718 ORTHO05D007431 4.3e-35 152.9 160 51.9
Hund02252 Selenicereus undatus HOM05D000718 ORTHO05D007431 7.3e-27 125.6 166 50.0
MSTRG.14233 Avicennia marina HOM05D000718 ORTHO05D007431 1.4e-17 94.7 88 54.5
Sp3g13120 Schrenkiella parvula HOM05D000718 ORTHO05D007431 5.2e-17 92.8 83 53.0
Psat2g113040 Pisum sativum HOM05D000718 ORTHO05D004709 1.2e-13 81.6 124 41.1
Psat3g077000 Pisum sativum HOM05D000718 ORTHO05D007431 3.0e-12 77.0 108 39.8
Thecc.07G113800 Theobroma cacao HOM05D000718 ORTHO05D007431 3.9e-12 76.6 181 33.7
Lsat_1_v5_gn_9_99920 Lactuca sativa HOM05D000718 ORTHO05D007431 8.6e-12 75.5 54 72.2
CBR_g49411 Chara braunii HOM05D000019 ORTHO05D000353 3.6e-10 70.1 275 24.0
Thecc.07G114100 Theobroma cacao HOM05D000718 ORTHO05D007431 6.2e-10 69.3 56 66.1


User provided reference genes

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