Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 4.3e-306 1053.9 551 100.0
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 1.6e-305 1052.0 551 99.8
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 6.3e-241 837.4 566 80.2
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 2.3e-235 818.9 551 78.2
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 1.4e-216 756.5 563 73.4
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 1.9e-213 746.1 551 73.7
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 7.2e-205 717.6 551 70.4
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 4.9e-201 704.9 548 68.6
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 6.4e-193 677.9 551 65.0
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 6.4e-193 677.9 551 65.9
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 3.2e-192 675.6 551 65.3
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 7.0e-192 674.5 551 64.8
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 1.2e-191 673.7 551 65.0
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 1.0e-190 670.6 551 65.2
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 5.6e-189 664.8 551 66.1
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 1.6e-188 663.3 548 64.6
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 1.4e-187 660.2 548 64.4
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 2.3e-187 659.4 551 64.2
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 5.2e-187 658.3 551 65.0
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 1.2e-186 657.1 551 65.5
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 3.4e-186 655.6 551 64.4
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 4.4e-186 655.2 551 62.8
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 3.7e-185 652.1 551 64.6
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 5.4e-184 648.3 551 63.2
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 7.0e-184 647.9 551 64.6
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 1.7e-182 643.3 522 65.3
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 2.3e-182 642.9 548 61.9
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 5.0e-182 641.7 548 61.9
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 1.5e-181 640.2 551 63.2
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 5.6e-181 638.3 548 61.3
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 5.6e-181 638.3 546 63.0
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 2.8e-180 636.0 551 63.3
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 3.6e-180 635.6 551 61.5
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 3.1e-179 632.5 551 63.2
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 2.0e-178 629.8 544 62.5
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 5.8e-178 628.2 551 61.9
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 9.8e-178 627.5 562 60.3
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 9.8e-178 627.5 669 56.2
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 2.9e-177 625.9 551 62.4
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 4.9e-177 625.2 548 61.5
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 4.9e-177 625.2 552 61.2
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 6.4e-177 624.8 548 62.2
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 7.1e-176 621.3 551 60.6
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 2.7e-175 619.4 554 61.0
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 3.5e-175 619.0 551 61.0
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 6.6e-174 614.8 551 61.2
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 5.6e-173 611.7 548 60.6
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 3.6e-172 609.0 554 59.9
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 3.6e-172 609.0 553 60.6
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 2.3e-171 606.3 552 59.8
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 4.0e-171 605.5 544 60.8
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 4.0e-171 605.5 544 60.8
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 8.9e-171 604.4 551 59.0
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 2.6e-170 602.8 593 58.0
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 5.8e-170 601.7 565 59.5
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 3.8e-169 599.0 547 60.1
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 6.4e-169 598.2 588 58.2
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 1.4e-168 597.0 548 60.4
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 1.3e-166 590.5 548 57.7
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.9e-165 586.6 551 58.8
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 5.6e-165 585.1 487 64.3
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 9.6e-165 584.3 548 57.7
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 3.6e-164 582.4 551 57.0
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 8.7e-158 561.2 599 55.6
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 3.3e-157 559.3 548 56.9
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.1e-155 554.3 551 56.4
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 1.5e-154 550.4 543 54.7
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 2.2e-153 546.6 551 57.9
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 1.9e-152 543.5 543 54.3
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 7.1e-152 541.6 545 54.7
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 9.3e-152 541.2 549 54.6
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 2.7e-151 539.7 543 54.1
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 3.3e-149 532.7 492 57.9
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 5.6e-149 531.9 553 54.2
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 6.2e-148 528.5 547 52.5
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 4.0e-147 525.8 544 53.9
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 1.3e-145 520.8 543 52.1
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 2.9e-145 519.6 471 60.7
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 1.1e-144 517.7 413 67.8
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 4.2e-144 515.8 543 51.7
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 7.1e-144 515.0 569 50.8
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 2.1e-143 513.5 557 51.0
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 2.5e-141 506.5 554 51.3
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 1.6e-140 503.8 570 49.5
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 5.8e-138 495.4 543 51.0
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 7.4e-133 478.4 540 48.1
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 2.0e-130 470.3 475 55.4
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 1.3e-129 467.6 429 62.7
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 1.9e-128 463.8 443 58.0
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 3.6e-127 459.5 552 45.7
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 7.2e-120 435.3 416 58.4
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 9.4e-112 408.3 330 67.6
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 1.1e-109 401.4 330 66.1
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 1.4e-107 394.4 579 43.4
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 1.3e-105 387.9 549 44.3
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 2.2e-92 344.0 314 60.2
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 2.2e-92 344.0 314 60.2
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 1.8e-91 340.9 402 50.2
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 4.4e-85 319.7 537 38.0
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 9.5e-80 302.0 398 48.7
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 3.0e-78 297.0 562 34.7
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 2.0e-77 294.3 241 66.4
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 1.1e-72 278.5 551 34.8
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 3.6e-71 273.5 270 57.0
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 6.0e-66 256.1 218 63.8
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 8.1e-63 245.7 289 53.3
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 1.5e-56 224.9 215 59.5
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 3.6e-55 220.3 163 69.9
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 6.2e-55 219.5 163 67.5
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 4.4e-53 213.4 229 51.1
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 4.4e-45 186.8 485 30.3
FAN25G1444 Fragaria x ananassa HOM05D005607 ORTHO05D008142 9.3e-35 152.5 109 69.7
QL08p023949 Quercus lobata HOM05D005607 ORTHO05D008142 1.6e-34 151.8 103 74.8
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 4.6e-34 150.2 314 34.4
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.8e-30 138.3 126 56.3
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 2.6e-21 107.8 95 61.1
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 5.8e-21 106.7 135 43.7
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 3.8e-20 104.0 101 54.5
CBR_g2888 Chara braunii HOM05D000019 ORTHO05D000002 2.9e-12 77.8 77 49.4
HanXRQChr10g0304121 Helianthus annuus HOM05D005607 ORTHO05D008142 1.2e-10 72.4 64 59.4
MELO3C030698.2 Cucumis melo HOM05D005607 ORTHO05D169846 1.4e-09 68.9 121 40.5
MELO3C033981.2 Cucumis melo HOM05D005607 ORTHO05D166899 2.5e-08 64.7 69 56.5
SEGI_12563 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 2.2e-07 61.6 61 47.5


User provided reference genes

Program Settings