Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 3.7e-252 874.4 445 100.0
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 1.0e-156 557.4 397 74.8
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 8.6e-156 554.3 397 74.6
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 6.4e-135 485.0 430 65.1
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 1.4e-126 457.2 296 77.0
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 7.3e-123 444.9 385 61.8
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 3.6e-122 442.6 357 65.0
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 1.4e-121 440.7 337 67.7
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 2.0e-120 436.8 382 63.6
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 7.6e-120 434.9 361 60.9
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 2.9e-119 433.0 394 60.7
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 3.8e-119 432.6 384 59.4
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 7.1e-118 428.3 384 59.4
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 1.6e-117 427.2 392 60.5
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 7.8e-117 424.9 401 58.1
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 1.0e-116 424.5 386 61.1
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.3e-116 424.1 333 63.7
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 6.6e-116 421.8 391 58.6
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 6.6e-116 421.8 386 61.4
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 8.7e-116 421.4 382 60.5
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 1.1e-115 421.0 401 57.6
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 1.5e-115 420.6 391 59.1
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 3.3e-115 419.5 385 57.9
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 4.3e-115 419.1 390 58.7
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 2.1e-114 416.8 386 58.8
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 4.0e-113 412.5 387 56.6
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 6.9e-113 411.8 402 58.2
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 2.0e-112 410.2 310 67.4
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 2.6e-112 409.8 389 57.8
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 4.4e-112 409.1 397 55.9
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 7.6e-112 408.3 422 55.0
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 9.9e-112 407.9 298 69.1
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 2.2e-111 406.8 384 58.3
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 1.1e-110 404.4 398 56.5
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 1.2e-109 401.0 390 56.7
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 4.6e-109 399.1 385 55.6
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 7.8e-109 398.3 422 54.7
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 6.6e-108 395.2 333 61.0
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 8.7e-108 394.8 390 55.6
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 1.1e-107 394.4 359 59.1
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 1.1e-107 394.4 400 54.5
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 1.5e-107 394.0 390 56.4
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 1.9e-107 393.7 386 54.7
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 3.3e-107 392.9 388 55.7
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 1.3e-106 391.0 294 66.3
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 3.6e-106 389.4 398 54.3
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 6.2e-106 388.7 386 55.7
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 6.2e-106 388.7 384 54.7
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 1.1e-105 387.9 321 61.7
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 1.1e-105 387.9 386 56.2
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 1.8e-105 387.1 344 60.5
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 2.4e-105 386.7 318 61.0
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 2.4e-105 386.7 318 61.0
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 9.0e-105 384.8 396 55.6
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 1.3e-103 380.9 353 58.4
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 2.2e-103 380.2 354 59.0
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 8.4e-103 378.3 330 59.7
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 8.4e-103 378.3 399 55.4
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 8.4e-103 378.3 300 63.7
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 3.2e-102 376.3 309 59.2
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 1.9e-99 367.1 318 58.8
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 3.3e-99 366.3 394 52.5
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 3.3e-99 366.3 334 56.9
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 7.4e-99 365.2 336 57.1
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 7.4e-99 365.2 328 58.8
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 1.3e-98 364.4 381 52.2
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 2.1e-98 363.6 390 51.5
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 2.8e-98 363.2 344 56.7
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 8.1e-98 361.7 389 52.7
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 5.3e-97 359.0 399 50.6
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 6.9e-97 358.6 378 53.2
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 1.2e-96 357.8 377 52.8
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.2e-96 357.8 427 48.7
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 4.5e-96 355.9 430 48.1
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 5.8e-96 355.5 292 62.3
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 5.8e-96 355.5 395 53.2
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 8.4e-95 351.7 394 51.3
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 2.5e-94 350.1 370 53.5
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 3.2e-94 349.7 280 62.9
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 7.1e-94 348.6 317 56.5
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 3.5e-93 346.3 383 51.2
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 3.5e-93 346.3 359 54.3
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 7.9e-93 345.1 365 52.6
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 1.8e-92 344.0 359 54.0
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 3.0e-92 343.2 396 51.3
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 3.0e-92 343.2 391 50.9
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 2.5e-91 340.1 296 56.4
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 3.3e-91 339.7 396 50.0
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 5.7e-91 339.0 398 49.7
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 3.7e-90 336.3 236 72.0
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 8.2e-90 335.1 373 51.2
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 1.1e-89 334.7 324 51.5
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 4.5e-88 329.3 385 48.8
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 4.3e-83 312.8 236 64.0
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 1.2e-77 294.7 392 45.9
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 7.9e-77 292.0 333 47.7
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 4.8e-74 282.7 222 62.6
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 2.0e-72 277.3 222 62.2
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 2.0e-72 277.3 354 43.8
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 1.3e-66 258.1 190 71.1
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 1.8e-65 254.2 328 41.2
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 2.6e-64 250.4 253 56.9
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 7.7e-64 248.8 174 75.3
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 2.7e-53 213.8 248 50.0
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 4.4e-51 206.5 180 55.6
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 3.8e-47 193.4 200 50.5
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 1.3e-42 178.3 179 52.5
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 4.1e-41 173.3 151 62.3
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 1.0e-39 168.7 312 35.3
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 1.0e-39 168.7 235 37.4
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 1.3e-39 168.3 350 33.7
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 1.9e-38 164.5 266 37.2
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 5.5e-38 162.9 189 48.7
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 2.1e-37 161.0 292 36.0
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 4.7e-37 159.8 292 36.0
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 3.0e-36 157.1 248 38.3
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 7.5e-35 152.5 279 36.9
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 3.7e-34 150.2 153 50.3
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 1.1e-33 148.7 147 51.0
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 1.8e-33 147.9 297 33.3
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 5.0e-31 139.8 224 33.9
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.1e-30 138.7 136 51.5
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 1.2e-29 135.2 194 41.8
Duzib213G0106 Durio zibethinus HOM05D006259 ORTHO05D007804 5.6e-22 109.8 130 46.9
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 2.2e-18 97.8 237 28.3
Actinidia09700 Actinidia chinensis HOM05D006259 ORTHO05D053169 1.4e-12 78.6 59 67.8
Atru.chr2.2423 Acer truncatum HOM05D006259 ORTHO05D007804 2.6e-11 74.3 108 44.4


User provided reference genes

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