Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11840 Vaccinium macrocarpon HOM05D002177 ORTHO05D426810 3.4e-136 488.4 262 100.0
vmacro11842 Vaccinium macrocarpon HOM05D002177 ORTHO05D002257 5.6e-22 109.0 67 100.0
vmacro22798 Vaccinium macrocarpon HOM05D002177 ORTHO05D002257 5.6e-22 109.0 67 100.0
Actinidia09990 Actinidia chinensis HOM05D002177 ORTHO05D002257 1.3e-13 81.3 68 67.6
Rhsim06G0196600 Rhododendron simsii HOM05D002177 ORTHO05D002257 4.0e-12 76.3 69 65.2
CSS0011671 Camellia sinensis var. sinensis HOM05D002177 ORTHO05D002257 4.4e-11 72.8 68 67.6
Cfa020550 Carpinus fangiana HOM05D002177 ORTHO05D002257 1.3e-10 71.2 67 64.2
Haze_09471 Corylus avellana HOM05D002177 ORTHO05D002257 1.3e-10 71.2 67 64.2
Nitab4.5_0001320g0150 Nicotiana tabacum HOM05D002177 ORTHO05D002257 2.2e-10 70.5 70 61.4
CSS0045170 Camellia sinensis var. sinensis HOM05D002177 ORTHO05D002257 2.9e-10 70.1 72 59.7
Nitab4.5_0000207g0200 Nicotiana tabacum HOM05D002177 ORTHO05D002257 3.8e-10 69.7 70 61.4
PGSC0003DMG400025008 Solanum tuberosum HOM05D002177 ORTHO05D002257 4.9e-10 69.3 68 60.3
Gohir.A01G065400 Gossypium hirsutum HOM05D002177 ORTHO05D002257 1.4e-09 67.8 67 55.2
Lsat_1_v5_gn_5_8540 Lactuca sativa HOM05D002177 ORTHO05D002257 1.4e-09 67.8 71 62.0
Sopen10g002830 Solanum pennellii HOM05D002177 ORTHO05D002257 1.4e-09 67.8 68 60.3
Dinv04321 Davidia involucrata HOM05D002177 ORTHO05D002257 2.4e-09 67.0 67 56.7
Duzib170G1083 Durio zibethinus HOM05D002177 ORTHO05D002257 2.4e-09 67.0 73 56.2
Thecc.07G077400 Theobroma cacao HOM05D002177 ORTHO05D002257 4.2e-09 66.2 73 57.5
Gorai.002G072600 Gossypium raimondii HOM05D002177 ORTHO05D002257 5.4e-09 65.9 66 54.5
Solyc10g006920.3 Solanum lycopersicum HOM05D002177 ORTHO05D002257 5.4e-09 65.9 68 58.8
CAN.G1110.50 Capsicum annuum HOM05D002177 ORTHO05D002257 7.1e-09 65.5 68 57.4
MELO3C016711.2 Cucumis melo HOM05D002177 ORTHO05D002257 9.3e-09 65.1 67 53.7
CsaV3_4G033840 Cucumis sativus L. HOM05D002177 ORTHO05D002257 9.3e-09 65.1 67 53.7
Dinv08313 Davidia involucrata HOM05D002177 ORTHO05D002257 1.2e-08 64.7 72 62.5
Duzib213G0974 Durio zibethinus HOM05D002177 ORTHO05D002257 1.2e-08 64.7 70 55.7
Hma1.2p1_0148F.1_g066210 Hydrangea macrophylla HOM05D002177 ORTHO05D002257 1.2e-08 64.7 71 59.2
VMungo1080G1817 Vigna mungo HOM05D002177 ORTHO05D002257 1.2e-08 64.7 69 53.6
Phvul.005G083300 Phaseolus vulgaris HOM05D002177 ORTHO05D002257 1.6e-08 64.3 69 52.2
COL.COLO4_09430 Corchorus olitorius HOM05D002177 ORTHO05D002257 2.1e-08 63.9 73 53.4
Peaxi162Scf00027g02811 Petunia axillaris HOM05D002177 ORTHO05D002257 2.1e-08 63.9 70 57.1
Eucgr.F03335 Eucalyptus grandis HOM05D002177 ORTHO05D002257 2.7e-08 63.5 70 55.7
Glyma.13G279100 Glycine max HOM05D002177 ORTHO05D002257 2.7e-08 63.5 67 55.2
Lj1A847T19 Lonicera japonica HOM05D002177 ORTHO05D002257 2.7e-08 63.5 68 57.4
Prupe.4G185300 Prunus persica HOM05D002177 ORTHO05D002257 2.7e-08 63.5 73 49.3
Gohir.D01G052800 Gossypium hirsutum HOM05D002177 ORTHO05D002257 3.5e-08 63.2 65 53.8
Sed0008533 Sechium edule HOM05D002177 ORTHO05D002257 4.6e-08 62.8 67 52.2
Glyma.12G222500 Glycine max HOM05D002177 ORTHO05D002257 6.0e-08 62.4 70 68.6
GSVIVG01014382001 Vitis vinifera HOM05D002177 ORTHO05D002257 1.0e-07 61.6 72 51.4
ClCG11G018190 Citrullus lanatus HOM05D002177 ORTHO05D002257 1.3e-07 61.2 67 52.2
QL08p019840 Quercus lobata HOM05D002177 ORTHO05D002257 1.3e-07 61.2 67 65.7
CiPaw.11G173000 Carya illinoinensis HOM05D002177 ORTHO05D002257 1.7e-07 60.8 71 64.8
Oeu060543.1 Olea europaea HOM05D002177 ORTHO05D002257 2.3e-07 60.5 71 53.5
Oeu005422.1 Olea europaea HOM05D002177 ORTHO05D002257 3.0e-07 60.1 72 55.6
Medtr2g079630 Medicago truncatula HOM05D002177 ORTHO05D002257 6.6e-07 58.9 70 47.1
TPR.G38957 Trifolium pratense HOM05D002177 ORTHO05D002257 6.6e-07 58.9 68 50.0
Ciclev10008537m.g Citrus clementina HOM05D002177 ORTHO05D002257 8.7e-07 58.5 69 49.3
Cc05_g12330 Coffea canephora HOM05D002177 ORTHO05D002257 1.9e-06 57.4 69 65.2
arahy.Tifrunner.gnm1.ann1.2T4TQI Arachis hypogaea HOM05D002177 ORTHO05D002257 3.3e-06 56.6 73 61.6
Hund02365 Selenicereus undatus HOM05D002177 ORTHO05D002257 3.3e-06 56.6 71 49.3
TAR629G1520 Trochodendron aralioides HOM05D002177 ORTHO05D002257 3.3e-06 56.6 67 61.2
vmacro09542 Vaccinium macrocarpon HOM05D002177 ORTHO05D002257 3.3e-06 56.6 71 59.2
TWI38G1374 Tripterygium wilfordii HOM05D002177 ORTHO05D002257 5.6e-06 55.8 67 50.7
arahy.Tifrunner.gnm1.ann1.3V0V2N Arachis hypogaea HOM05D002177 ORTHO05D002257 7.3e-06 55.5 73 61.6
DCAR_013088 Daucus carota HOM05D002177 ORTHO05D002257 7.3e-06 55.5 69 56.5
Gohir.D05G358760 Gossypium hirsutum HOM05D002177 ORTHO05D002257 7.3e-06 55.5 74 51.4
Gohir.D05G358780 Gossypium hirsutum HOM05D002177 ORTHO05D002257 7.3e-06 55.5 74 51.4
Gorai.009G434500 Gossypium raimondii HOM05D002177 ORTHO05D002257 7.3e-06 55.5 74 51.4
TAR627G1091 Trochodendron aralioides HOM05D002177 ORTHO05D002257 7.3e-06 55.5 67 64.2
TWI39G0451 Tripterygium wilfordii HOM05D002177 ORTHO05D002257 9.6e-06 55.1 67 50.7


User provided reference genes

Program Settings