Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11810 Vaccinium macrocarpon HOM05D004171 ORTHO05D004983 1.9e-137 492.7 271 100.0
Rhsim06G0192400 Rhododendron simsii HOM05D004171 ORTHO05D004983 2.1e-125 452.6 272 83.5
Actinidia05147 Actinidia chinensis HOM05D004171 ORTHO05D004983 2.4e-116 422.5 269 78.1
CSS0009250 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 9.0e-116 420.6 273 76.9
Actinidia09971 Actinidia chinensis HOM05D004171 ORTHO05D004983 2.6e-115 419.1 269 77.3
Hma1.2p1_1176F.1_g264170 Hydrangea macrophylla HOM05D004171 ORTHO05D004983 4.3e-110 401.7 269 72.9
Dinv08350 Davidia involucrata HOM05D004171 ORTHO05D004983 3.7e-109 398.7 230 83.0
TAR627G1073 Trochodendron aralioides HOM05D004171 ORTHO05D004983 1.1e-108 397.1 270 71.5
Duzib213G0518 Durio zibethinus HOM05D004171 ORTHO05D004983 1.0e-106 390.6 271 70.1
TAR629G3225 Trochodendron aralioides HOM05D004171 ORTHO05D004983 1.0e-106 390.6 270 71.5
COL.COLO4_09488 Corchorus olitorius HOM05D004171 ORTHO05D004983 1.7e-106 389.8 271 69.0
Glyma.12G134300 Glycine max HOM05D004171 ORTHO05D004983 4.9e-106 388.3 230 80.0
Dinv22359 Davidia involucrata HOM05D004171 ORTHO05D004983 1.1e-105 387.1 265 71.7
Sabra11G0111100 Salix brachista HOM05D004171 ORTHO05D004983 2.5e-105 386.0 270 68.1
GSVIVG01014444001 Vitis vinifera HOM05D004171 ORTHO05D004983 4.2e-105 385.2 230 79.1
Duzib268G0239 Durio zibethinus HOM05D004171 ORTHO05D004983 5.5e-105 384.8 269 69.1
Nitab4.5_0000297g0160 Nicotiana tabacum HOM05D004171 ORTHO05D004983 1.2e-104 383.6 271 67.2
Migut.H01900 Erythranthe guttata HOM05D004171 ORTHO05D004983 2.1e-104 382.9 273 74.4
Thecc.07G070400 Theobroma cacao HOM05D004171 ORTHO05D004983 2.1e-104 382.9 275 68.0
Potri.011G126300 Populus trichocarpa HOM05D004171 ORTHO05D004983 2.7e-104 382.5 270 67.4
VMungo1127G0586 Vigna mungo HOM05D004171 ORTHO05D004983 6.0e-104 381.3 230 77.4
MSTRG.12927 Avicennia marina HOM05D004171 ORTHO05D004983 1.0e-103 380.6 270 67.4
PGSC0003DMG400019283 Solanum tuberosum HOM05D004171 ORTHO05D004983 1.3e-103 380.2 273 66.7
Atru.chr2.2929 Acer truncatum HOM05D004171 ORTHO05D004983 1.8e-103 379.8 273 68.9
Lj3g0003583 Lotus japonicus HOM05D004171 ORTHO05D004983 3.0e-103 379.0 230 77.4
Peaxi162Scf01216g00047 Petunia axillaris HOM05D004171 ORTHO05D004983 3.0e-103 379.0 269 66.9
Solyc07g063620.3 Solanum lycopersicum HOM05D004171 ORTHO05D004983 3.9e-103 378.6 273 66.3
Sopen07g031800 Solanum pennellii HOM05D004171 ORTHO05D004983 3.9e-103 378.6 273 67.0
Cc05_g12750 Coffea canephora HOM05D004171 ORTHO05D004983 5.1e-103 378.3 270 67.4
Duzib170G1088 Durio zibethinus HOM05D004171 ORTHO05D004983 5.1e-103 378.3 273 68.1
CSS0026220 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 6.7e-103 377.9 269 71.0
Nitab4.5_0009110g0010 Nicotiana tabacum HOM05D004171 ORTHO05D004983 8.7e-103 377.5 271 66.1
PGR083G0998 Punica granatum HOM05D004171 ORTHO05D004983 8.7e-103 377.5 270 68.5
Phvul.011G138400 Phaseolus vulgaris HOM05D004171 ORTHO05D004983 1.1e-102 377.1 230 76.1
arahy.Tifrunner.gnm1.ann1.EUN1K4 Arachis hypogaea HOM05D004171 ORTHO05D004983 1.5e-102 376.7 230 75.7
arahy.Tifrunner.gnm1.ann1.SXKR4Z Arachis hypogaea HOM05D004171 ORTHO05D004983 1.9e-102 376.3 270 66.7
Manes.15G082500 Manihot esculenta HOM05D004171 ORTHO05D004983 2.5e-102 375.9 276 65.2
PSO541G5656 Papaver somniferum HOM05D004171 ORTHO05D004983 2.5e-102 375.9 273 69.2
Ciclev10009152m.g Citrus clementina HOM05D004171 ORTHO05D004983 3.3e-102 375.6 274 67.5
RcHm_v2.0_Chr5g0036121 Rosa chinensis HOM05D004171 ORTHO05D004983 5.7e-102 374.8 273 67.0
Cfa020499 Carpinus fangiana HOM05D004171 ORTHO05D004983 7.4e-102 374.4 274 68.6
Haze_09543 Corylus avellana HOM05D004171 ORTHO05D004983 1.3e-101 373.6 271 67.9
Gohir.A04G025600 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.3e-101 373.6 269 68.4
Gohir.D05G362300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.3e-101 373.6 269 68.4
Gorai.009G430400 Gossypium raimondii HOM05D004171 ORTHO05D004983 1.3e-101 373.6 269 68.4
TWI38G2120 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 1.6e-101 373.2 230 76.5
CiPaw.11G177500 Carya illinoinensis HOM05D004171 ORTHO05D004983 3.7e-101 372.1 271 67.9
PSO675G0635 Papaver somniferum HOM05D004171 ORTHO05D004983 4.8e-101 371.7 273 67.0
Eucgr.F01074 Eucalyptus grandis HOM05D004171 ORTHO05D004983 3.1e-100 369.0 230 76.5
Sc16g0006730 Simmondsia chinensis HOM05D004171 ORTHO05D004983 3.1e-100 369.0 230 74.3
Hund23371 Selenicereus undatus HOM05D004171 ORTHO05D004983 4.1e-100 368.6 273 70.0
Ah.04g165380 Amaranthus hybridus HOM05D004171 ORTHO05D004983 5.3e-100 368.2 272 64.3
SalBow7G4117 Salvia bowleyana HOM05D004171 ORTHO05D004983 5.3e-100 368.2 270 64.4
Eucgr.F03360 Eucalyptus grandis HOM05D004171 ORTHO05D004983 6.9e-100 367.9 231 78.4
Medtr8g464760 Medicago truncatula HOM05D004171 ORTHO05D004983 1.2e-99 367.1 230 75.7
Cpa.g.sc12.36 Carica papaya HOM05D004171 ORTHO05D004983 1.5e-99 366.7 269 65.4
ClCG11G018550 Citrullus lanatus HOM05D004171 ORTHO05D004983 2.0e-99 366.3 230 75.7
FAN11G0158 Fragaria x ananassa HOM05D004171 ORTHO05D004983 4.5e-99 365.2 274 66.1
Oeu006766.1 Olea europaea HOM05D004171 ORTHO05D004983 4.5e-99 365.2 268 67.2
MSTRG.14383 Avicennia marina HOM05D004171 ORTHO05D004983 5.9e-99 364.8 270 66.3
Gohir.A13G143300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 7.6e-99 364.4 271 65.3
MD11G1235500 Malus domestica HOM05D004171 ORTHO05D004983 7.6e-99 364.4 268 65.3
Prupe.4G191500 Prunus persica HOM05D004171 ORTHO05D004983 1.0e-98 364.0 230 75.7
FAN16G3093 Fragaria x ananassa HOM05D004171 ORTHO05D004983 1.3e-98 363.6 274 66.1
Psat4g140880 Pisum sativum HOM05D004171 ORTHO05D004983 1.3e-98 363.6 230 73.9
Gohir.D13G148000 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.7e-98 363.2 270 64.8
Gorai.013G165800 Gossypium raimondii HOM05D004171 ORTHO05D004983 1.7e-98 363.2 270 64.8
Manes.03G117000 Manihot esculenta HOM05D004171 ORTHO05D004983 1.7e-98 363.2 230 73.0
Glyma.12G218800 Glycine max HOM05D004171 ORTHO05D004983 2.2e-98 362.8 273 64.8
Aqoxy1G02716 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 5.0e-98 361.7 275 64.4
CAN.G162.108 Capsicum annuum HOM05D004171 ORTHO05D004983 6.5e-98 361.3 230 73.0
MELO3C018184.2 Cucumis melo HOM05D004171 ORTHO05D004983 1.1e-97 360.5 230 75.2
FvH4_3g21110 Fragaria vesca HOM05D004171 ORTHO05D004983 1.4e-97 360.1 273 65.2
TWI39G0675 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 1.4e-97 360.1 271 74.2
FAN25G0362 Fragaria x ananassa HOM05D004171 ORTHO05D004983 1.9e-97 359.8 274 64.6
CANSAT11G0840 Cannabis sativa HOM05D004171 ORTHO05D004983 3.2e-97 359.0 273 73.6
SGA_v2.0_scaffold9G04958 Striga asiatica HOM05D004171 ORTHO05D004983 5.5e-97 358.2 270 64.1
MBI02_g13230_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 7.2e-97 357.8 271 64.9
EL10Ac4g08047 Beta vulgaris HOM05D004171 ORTHO05D004983 9.3e-97 357.5 301 59.5
CiPaw.12G123300 Carya illinoinensis HOM05D004171 ORTHO05D004983 9.3e-97 357.5 273 65.6
AUR62015590 Chenopodium quinoa HOM05D004171 ORTHO05D004983 1.2e-96 357.1 272 62.1
Lj1A854T34 Lonicera japonica HOM05D004171 ORTHO05D004983 1.2e-96 357.1 270 64.8
CsaV3_3G044320 Cucumis sativus L. HOM05D004171 ORTHO05D004983 1.6e-96 356.7 230 74.8
PGR031G0147 Punica granatum HOM05D004171 ORTHO05D004983 2.1e-96 356.3 273 65.2
arahy.Tifrunner.gnm1.ann1.H2QIWP Arachis hypogaea HOM05D004171 ORTHO05D004983 4.6e-96 355.1 230 70.4
arahy.Tifrunner.gnm1.ann1.UD3S3B Arachis hypogaea HOM05D004171 ORTHO05D004983 4.6e-96 355.1 230 70.4
AUR62029303 Chenopodium quinoa HOM05D004171 ORTHO05D004983 4.6e-96 355.1 272 61.8
MD03G1217700 Malus domestica HOM05D004171 ORTHO05D004983 4.6e-96 355.1 268 64.6
QL08p017518 Quercus lobata HOM05D004171 ORTHO05D004983 6.1e-96 354.8 231 73.6
THA.LOC104799905 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 6.7e-95 351.3 278 61.5
TPR.G25226 Trifolium pratense HOM05D004171 ORTHO05D004983 4.3e-94 348.6 270 63.3
MBI18_g19831_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 7.4e-94 347.8 269 61.3
THA.LOC104813397 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 7.4e-94 347.8 237 70.9
Lalb_Chr01g0017051 Lupinus albus HOM05D004171 ORTHO05D004983 9.7e-94 347.4 230 69.1
Lalb_Chr19g0134521 Lupinus albus HOM05D004171 ORTHO05D004983 2.8e-93 345.9 230 71.3
Sed0025378 Sechium edule HOM05D004171 ORTHO05D004983 6.3e-93 344.7 268 63.8
C09p44520 Brassica napus HOM05D004171 ORTHO05D004983 8.2e-93 344.4 279 60.2
BraA10t43247Z Brassica rapa HOM05D004171 ORTHO05D004983 1.8e-92 343.2 279 59.9
BcaC04g20360 Brassica carinata HOM05D004171 ORTHO05D004983 2.4e-92 342.8 279 59.9
BolC9t57324H Brassica oleracea HOM05D004171 ORTHO05D004983 2.4e-92 342.8 279 59.9
HanXRQChr02g0031371 Helianthus annuus HOM05D004171 ORTHO05D004983 3.1e-92 342.4 231 69.7
A10p11530 Brassica napus HOM05D004171 ORTHO05D004983 6.9e-92 341.3 279 59.9
BcaB08g35778 Brassica carinata HOM05D004171 ORTHO05D004983 2.0e-91 339.7 279 59.5
BcaB05g22115 Brassica carinata HOM05D004171 ORTHO05D004983 3.4e-91 339.0 279 58.8
Thhalv10014333m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 3.4e-91 339.0 279 58.8
BraA02t06113Z Brassica rapa HOM05D004171 ORTHO05D004983 4.5e-91 338.6 279 58.8
Aa31LG3G10200 Aethionema arabicum HOM05D004171 ORTHO05D004983 5.9e-91 338.2 279 58.8
Sp6g16280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 7.7e-91 337.8 279 58.4
CARHR267500 Cardamine hirsuta HOM05D004171 ORTHO05D004983 1.0e-90 337.4 280 58.9
DCAR_009989 Daucus carota HOM05D004171 ORTHO05D004983 1.0e-90 337.4 230 67.8
A02p10500 Brassica napus HOM05D004171 ORTHO05D004983 1.3e-90 337.0 279 58.4
AT5G54240 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 3.8e-90 335.5 281 58.7
unitig_699.g19211 Utricularia gibba HOM05D004171 ORTHO05D004983 6.5e-90 334.7 270 60.7
ATR0693G292 Amborella trichopoda HOM05D004171 ORTHO05D004983 1.4e-89 333.6 230 66.5
VMungo1080G1500 Vigna mungo HOM05D004171 ORTHO05D004983 2.5e-89 332.8 230 68.7
Lsat_1_v5_gn_7_105981 Lactuca sativa HOM05D004171 ORTHO05D004983 1.2e-88 330.5 231 66.2
AL8G29560 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 1.6e-88 330.1 281 58.0
Thhalv10025946m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 1.6e-88 330.1 277 57.4
Sed0003677 Sechium edule HOM05D004171 ORTHO05D004983 1.6e-88 330.1 230 67.0
MBI18_g27681_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 2.7e-88 329.3 288 56.9
Sp7g25280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 1.0e-87 327.4 278 55.8
CDE02G1151 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 1.4e-87 327.0 270 58.5
FAN21G0927 Fragaria x ananassa HOM05D004171 ORTHO05D004983 8.8e-87 324.3 232 69.0
AL7G25450 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 1.1e-86 323.9 239 62.8
AT4G27350 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 2.0e-86 323.2 239 61.9
Carub.0008s1458 Capsella rubella HOM05D004171 ORTHO05D004983 5.7e-86 321.6 277 58.1
BcaNung03036 Brassica carinata HOM05D004171 ORTHO05D004983 9.7e-86 320.9 281 55.5
BcaNung05201 Brassica carinata HOM05D004171 ORTHO05D004983 9.7e-86 320.9 281 55.5
BcaC09g50581 Brassica carinata HOM05D004171 ORTHO05D004983 2.8e-85 319.3 240 62.5
BolC1t02294H Brassica oleracea HOM05D004171 ORTHO05D004983 2.8e-85 319.3 240 62.5
ECA236G3492 Erigeron canadensis HOM05D004171 ORTHO05D004983 3.7e-85 318.9 231 65.8
BcaNung05200 Brassica carinata HOM05D004171 ORTHO05D004983 6.3e-85 318.2 280 55.7
CARHR235000 Cardamine hirsuta HOM05D004171 ORTHO05D004983 1.1e-84 317.4 239 60.7
A01p18530 Brassica napus HOM05D004171 ORTHO05D004983 1.8e-84 316.6 241 61.8
C01p23480 Brassica napus HOM05D004171 ORTHO05D004983 1.8e-84 316.6 240 61.7
BraA01t01802Z Brassica rapa HOM05D004171 ORTHO05D004983 1.8e-84 316.6 241 61.8
HPP92_012360 Vanilla planifolia HOM05D004171 ORTHO05D004983 1.8e-84 316.6 271 64.2
Carub.0007s1352 Capsella rubella HOM05D004171 ORTHO05D004983 2.4e-84 316.2 239 61.5
Gohir.A08G020900 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.7e-82 310.1 269 59.9
Gorai.004G029100 Gossypium raimondii HOM05D004171 ORTHO05D004983 3.8e-82 308.9 230 67.0
BcaC09g50583 Brassica carinata HOM05D002586 ORTHO05D007009 1.2e-80 303.9 230 62.6
Aa31LG5G10160 Aethionema arabicum HOM05D002586 ORTHO05D007009 8.0e-80 301.2 230 60.9
Os07g0559400 Oryza sativa ssp. japonica HOM05D004171 ORTHO05D004983 3.9e-79 298.9 280 53.2
Zm00001eb324170 Zea mays HOM05D004171 ORTHO05D004983 2.6e-78 296.2 271 54.6
DCAR_008697 Daucus carota HOM05D004171 ORTHO05D004983 4.1e-76 288.9 229 60.3
Potri.001G408001 Populus trichocarpa HOM05D004171 ORTHO05D004983 5.0e-74 282.0 181 71.8
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 1.9e-73 280.0 219 57.5
CAN.G847.1 Capsicum annuum HOM05D004171 ORTHO05D004983 2.5e-73 279.6 198 67.2
CDE01G0586 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 2.7e-72 276.2 206 64.1
Mapoly0102s0009 Marchantia polymorpha HOM05D004171 ORTHO05D004983 2.2e-69 266.5 236 53.0
SEGI_27365 Sequoiadendron giganteum HOM05D004171 ORTHO05D004983 5.0e-66 255.4 192 61.5
CAN.G187.6 Capsicum annuum HOM05D004171 ORTHO05D004983 6.8e-63 245.0 186 62.9
SMO116G0055 Selaginella moellendorffii HOM05D004171 ORTHO05D004983 4.4e-62 242.3 233 47.6
Pp3c3_11900 Physcomitrium patens HOM05D004171 ORTHO05D004983 9.1e-60 234.6 234 47.9
Nn1g03875 Nelumbo nucifera HOM05D004171 ORTHO05D004983 9.5e-57 224.6 178 64.0
Oeu019367.1 Olea europaea HOM05D004171 ORTHO05D004983 6.3e-53 211.8 151 68.2
AagrBONN_evm.TU.Sc2ySwM_228.913 Anthoceros agrestis HOM05D004171 ORTHO05D004983 1.6e-48 197.2 205 48.8
Ca_22993_v3 Cicer arietinum L. HOM05D004171 ORTHO05D004983 1.4e-47 194.1 153 60.8
Nn1g06780 Nelumbo nucifera HOM05D004171 ORTHO05D004983 4.0e-47 192.6 152 63.8
CDE12G0832 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 2.9e-45 186.4 200 49.5
CBR_g24077 Chara braunii HOM05D004171 ORTHO05D004983 1.9e-44 183.7 232 40.9
Gohir.D08G031500 Gossypium hirsutum HOM05D004171 ORTHO05D004983 9.2e-44 181.4 130 68.5
C02p17300 Brassica napus HOM05D004171 ORTHO05D004983 2.5e-33 146.7 131 55.0
BolC2t07830H Brassica oleracea HOM05D004171 ORTHO05D004983 3.3e-33 146.4 131 55.0
BolC2t07836H Brassica oleracea HOM05D004171 ORTHO05D004983 3.3e-33 146.4 131 55.0
CBR_g54085 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-23 114.8 117 43.6
BcaNung05202 Brassica carinata HOM05D004171 ORTHO05D004983 2.7e-19 100.1 110 45.5
AL9U10820 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 5.1e-18 95.9 74 58.1
CDE05G1305 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 2.0e-14 84.0 177 30.5
Actinidia37164 Actinidia chinensis HOM05D004171 ORTHO05D057920 3.6e-08 63.2 68 50.0


User provided reference genes

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