Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11788 Vaccinium macrocarpon HOM05D004423 ORTHO05D005464 1.2e-118 429.9 228 100.0
vmacro02301 Vaccinium macrocarpon HOM05D004423 ORTHO05D005464 6.3e-78 294.7 162 89.5
Rhsim11G0195000 Rhododendron simsii HOM05D004423 ORTHO05D005464 1.0e-64 250.8 162 74.1
Actinidia18027 Actinidia chinensis HOM05D004423 ORTHO05D005464 2.2e-54 216.5 161 64.6
Actinidia20541 Actinidia chinensis HOM05D004423 ORTHO05D005464 2.6e-52 209.5 161 63.4
Dinv41903 Davidia involucrata HOM05D004423 ORTHO05D005464 2.2e-51 206.5 165 61.2
Hma1.2p1_0032F.1_g019020 Hydrangea macrophylla HOM05D004423 ORTHO05D005464 8.3e-46 188.0 167 55.7
Hma1.2p1_0032F.1_g019030 Hydrangea macrophylla HOM05D004423 ORTHO05D005464 2.5e-42 176.4 161 54.7
TAR376G0159 Trochodendron aralioides HOM05D004423 ORTHO05D005464 4.2e-42 175.6 169 47.9
DCAR_022414 Daucus carota HOM05D004423 ORTHO05D005464 1.2e-39 167.5 173 47.4
CiPaw.05G087000 Carya illinoinensis HOM05D004423 ORTHO05D005464 1.1e-37 161.0 164 51.2
FvH4_2g15920 Fragaria vesca HOM05D004423 ORTHO05D005464 2.4e-37 159.8 163 47.2
QL11p053191 Quercus lobata HOM05D004423 ORTHO05D005464 3.1e-37 159.5 162 49.4
FAN15G2581 Fragaria x ananassa HOM05D004423 ORTHO05D005464 9.1e-37 157.9 163 47.9
Cfa005315 Carpinus fangiana HOM05D004423 ORTHO05D005464 1.2e-36 157.5 167 47.9
FAN24G1532 Fragaria x ananassa HOM05D004423 ORTHO05D005464 2.0e-36 156.8 163 46.6
FAN20G1295 Fragaria x ananassa HOM05D004423 ORTHO05D005464 5.9e-36 155.2 162 47.5
Cc00_g02430 Coffea canephora HOM05D004423 ORTHO05D005464 7.7e-36 154.8 163 43.6
Prupe.8G172300 Prunus persica HOM05D004423 ORTHO05D005464 1.3e-35 154.1 169 46.2
Oeu045082.1 Olea europaea HOM05D004423 ORTHO05D005464 2.3e-35 153.3 168 48.2
Potri.009G139900 Populus trichocarpa HOM05D004423 ORTHO05D005464 2.3e-35 153.3 163 47.2
Lj5C174T8 Lonicera japonica HOM05D004423 ORTHO05D005464 3.8e-35 152.5 169 49.7
SalBow1G3590 Salvia bowleyana HOM05D004423 ORTHO05D005464 3.8e-35 152.5 159 47.2
Haze_02070 Corylus avellana HOM05D004423 ORTHO05D005464 1.1e-34 151.0 167 45.5
Nn7g38050 Nelumbo nucifera HOM05D004423 ORTHO05D005464 3.3e-34 149.4 169 45.6
Sabra09G0108500 Salix brachista HOM05D004423 ORTHO05D005464 5.5e-34 148.7 163 46.6
Thecc.02G052800 Theobroma cacao HOM05D004423 ORTHO05D005464 9.5e-34 147.9 169 46.2
MD10G1131500 Malus domestica HOM05D004423 ORTHO05D005464 1.6e-33 147.1 164 47.0
RcHm_v2.0_Chr6g0279371 Rosa chinensis HOM05D004423 ORTHO05D005464 2.8e-33 146.4 163 43.6
Cpa.g.sc20.132 Carica papaya HOM05D004423 ORTHO05D005464 6.1e-33 145.2 166 48.8
Duzib132G0529 Durio zibethinus HOM05D004423 ORTHO05D005464 8.0e-33 144.8 169 47.9
Nitab4.5_0003679g0020 Nicotiana tabacum HOM05D004423 ORTHO05D005464 3.0e-32 142.9 164 45.7
Manes.11G100750 Manihot esculenta HOM05D004423 ORTHO05D005464 6.8e-32 141.7 167 44.9
MD05G1128200 Malus domestica HOM05D004423 ORTHO05D005464 8.9e-32 141.4 160 46.2
Aqoxy2G04085 Aquilegia oxysepala HOM05D004423 ORTHO05D005464 1.5e-31 140.6 158 44.3
ECA246G1499 Erigeron canadensis HOM05D004423 ORTHO05D005464 4.4e-31 139.0 158 44.3
Sed0008640 Sechium edule HOM05D004423 ORTHO05D005464 2.2e-30 136.7 170 47.1
Peaxi162Scf00362g00356 Petunia axillaris HOM05D004423 ORTHO05D005464 3.7e-30 136.0 164 42.7
Ciclev10027678m.g Citrus clementina HOM05D004423 ORTHO05D005464 4.9e-30 135.6 165 44.2
PSO063G1777 Papaver somniferum HOM05D004423 ORTHO05D005464 4.9e-30 135.6 158 44.9
Atru.chr5.3471 Acer truncatum HOM05D004423 ORTHO05D005464 1.1e-29 134.4 168 44.0
ClCG02G011090 Citrullus lanatus HOM05D004423 ORTHO05D005464 5.4e-29 132.1 168 44.0
Migut.B00041 Erythranthe guttata HOM05D004423 ORTHO05D005464 5.4e-29 132.1 158 45.6
Eucgr.G01811 Eucalyptus grandis HOM05D004423 ORTHO05D005464 5.4e-29 132.1 168 44.6
PSO782G0263 Papaver somniferum HOM05D004423 ORTHO05D005464 9.2e-29 131.3 158 43.7
Gohir.A01G171600 Gossypium hirsutum HOM05D004423 ORTHO05D005464 1.6e-28 130.6 168 42.9
Eucgr.E03994 Eucalyptus grandis HOM05D004423 ORTHO05D005464 2.7e-28 129.8 169 45.0
MBI01_g09373_MAGBIO Magnolia biondii HOM05D004423 ORTHO05D005464 3.5e-28 129.4 172 39.0
Gohir.D01G162500 Gossypium hirsutum HOM05D004423 ORTHO05D005464 4.6e-28 129.0 168 42.3
Gorai.002G201600 Gossypium raimondii HOM05D004423 ORTHO05D005464 4.6e-28 129.0 168 42.3
Lj2g0017242 Lotus japonicus HOM05D004423 ORTHO05D005464 7.8e-28 128.3 161 46.6
CANSAT25G0289 Cannabis sativa HOM05D004423 ORTHO05D005464 1.7e-27 127.1 168 41.7
HanXRQChr17g0543821 Helianthus annuus HOM05D004423 ORTHO05D005464 2.9e-27 126.3 159 43.4
Solyc01g111910.3 Solanum lycopersicum HOM05D004423 ORTHO05D005464 3.9e-27 125.9 164 40.9
Sopen01g053960 Solanum pennellii HOM05D004423 ORTHO05D005464 5.0e-27 125.6 164 40.9
Lalb_Chr17g0341361 Lupinus albus HOM05D004423 ORTHO05D005464 6.6e-27 125.2 159 42.1
MELO3C013664.2 Cucumis melo HOM05D004423 ORTHO05D005464 1.1e-26 124.4 166 41.6
AUR62009995 Chenopodium quinoa HOM05D004423 ORTHO05D005464 1.5e-26 124.0 164 40.9
CAN.G1235.36 Capsicum annuum HOM05D004423 ORTHO05D005464 3.3e-26 122.9 164 39.0
CsaV3_6G012570 Cucumis sativus L. HOM05D004423 ORTHO05D005464 3.3e-26 122.9 171 42.1
Medtr5g046240 Medicago truncatula HOM05D004423 ORTHO05D005464 1.2e-25 120.9 166 41.6
TPR.G38573 Trifolium pratense HOM05D004423 ORTHO05D005464 1.2e-25 120.9 166 40.4
AUR62012983 Chenopodium quinoa HOM05D004423 ORTHO05D005464 2.1e-25 120.2 164 40.9
TWI75G0836 Tripterygium wilfordii HOM05D004423 ORTHO05D005464 2.1e-25 120.2 167 41.9
PGR042G3292 Punica granatum HOM05D004423 ORTHO05D005464 5.2e-24 115.5 164 40.9
Psat2g133680 Pisum sativum HOM05D004423 ORTHO05D005464 1.2e-23 114.4 168 41.1
arahy.Tifrunner.gnm1.ann1.CJIC4D Arachis hypogaea HOM05D004423 ORTHO05D005464 2.6e-23 113.2 166 41.0
Glyma.02G121200 Glycine max HOM05D004423 ORTHO05D005464 2.6e-23 113.2 164 39.6
Phvul.003G039700 Phaseolus vulgaris HOM05D004423 ORTHO05D005464 2.6e-23 113.2 167 39.5
VMungo1215G3113 Vigna mungo HOM05D004423 ORTHO05D005464 2.6e-23 113.2 161 42.2
COL.COLO4_18006 Corchorus olitorius HOM05D004423 ORTHO05D005464 1.3e-22 110.9 122 45.9
Glyma.01G063600 Glycine max HOM05D004423 ORTHO05D005464 1.3e-22 110.9 166 39.8
Ca_05030_v3 Cicer arietinum L. HOM05D004423 ORTHO05D005464 2.2e-22 110.2 165 39.4
EL10Ac9g21318 Beta vulgaris HOM05D004423 ORTHO05D005464 3.7e-22 109.4 160 40.0
Haze_02078 Corylus avellana HOM05D004423 ORTHO05D005464 4.9e-22 109.0 164 37.8
BraA04t16972Z Brassica rapa HOM05D004423 ORTHO05D005464 6.4e-22 108.6 157 42.0
Lsat_1_v5_gn_3_47300 Lactuca sativa HOM05D004423 ORTHO05D005464 8.3e-22 108.2 157 39.5
A04p13130 Brassica napus HOM05D004423 ORTHO05D005464 1.4e-21 107.5 157 41.4
HPP92_024001 Vanilla planifolia HOM05D004423 ORTHO05D005464 1.4e-21 107.5 165 37.6
SGA_v2.0_scaffold58G20334 Striga asiatica HOM05D004423 ORTHO05D005464 3.2e-21 106.3 161 38.5
unitig_21.g20846 Utricularia gibba HOM05D004423 ORTHO05D005464 4.1e-21 105.9 161 36.0
C04p46880 Brassica napus HOM05D004423 ORTHO05D005464 9.2e-21 104.8 165 40.0
Sc18g0006140 Simmondsia chinensis HOM05D004423 ORTHO05D005464 2.0e-20 103.6 164 37.8
Hund06453 Selenicereus undatus HOM05D004423 ORTHO05D005464 2.7e-20 103.2 162 39.5
GSVIVG01023952001 Vitis vinifera HOM05D004423 ORTHO05D005464 4.6e-20 102.4 161 39.8
BolC4t26280H Brassica oleracea HOM05D004423 ORTHO05D005464 7.8e-20 101.7 165 39.4
Ah.01g008070 Amaranthus hybridus HOM05D004423 ORTHO05D005464 1.7e-19 100.5 159 39.0
Carub.0007s0033 Capsella rubella HOM05D004423 ORTHO05D005464 5.0e-19 99.0 170 36.5
Zm00001eb385260 Zea mays HOM05D004423 ORTHO05D005464 5.0e-19 99.0 168 36.3
AT4G38440 Arabidopsis thaliana HOM05D004423 ORTHO05D005464 6.6e-19 98.6 170 35.9
AL7G10310 Arabidopsis lyrata HOM05D004423 ORTHO05D005464 1.1e-18 97.8 170 35.9
Sp7g37340 Schrenkiella parvula HOM05D004423 ORTHO05D005464 1.1e-18 97.8 172 36.6
Aa31LG6G16860 Aethionema arabicum HOM05D004423 ORTHO05D005464 1.5e-18 97.4 166 41.6
ATR0322G068 Amborella trichopoda HOM05D004423 ORTHO05D005464 1.9e-18 97.1 162 33.3
THA.LOC104824748 Tarenaya hassleriana HOM05D004423 ORTHO05D005464 4.3e-18 95.9 167 38.3
Os06g0574400 Oryza sativa ssp. japonica HOM05D004423 ORTHO05D005464 5.6e-18 95.5 163 33.7
CARHR294170 Cardamine hirsuta HOM05D004423 ORTHO05D005464 7.3e-18 95.1 171 33.3
Thhalv10024216m.g Eutrema salsugineum HOM05D004423 ORTHO05D005464 2.8e-17 93.2 170 35.9
SalBow1G2566 Salvia bowleyana HOM05D004423 ORTHO05D000248 6.8e-16 88.6 75 54.7
CDE09G0751 Ceratophyllum demersum HOM05D004423 ORTHO05D005464 1.2e-15 87.8 159 30.2
SEGI_28605 Sequoiadendron giganteum HOM05D004423 ORTHO05D005464 1.5e-15 87.4 175 31.4
arahy.Tifrunner.gnm1.ann1.YN7PRK Arachis hypogaea HOM05D004423 ORTHO05D005464 1.3e-14 84.3 159 34.6
AagrBONN_evm.TU.Sc2ySwM_369.194 Anthoceros agrestis HOM05D004423 ORTHO05D005464 2.2e-14 83.6 178 31.5
BcaB06g27461 Brassica carinata HOM05D004423 ORTHO05D005464 7.1e-13 78.6 132 40.9
SHI46553 Sapria himalayana HOM05D004423 ORTHO05D005464 7.8e-12 75.1 168 31.0
SHI08411 Sapria himalayana HOM05D004423 ORTHO05D005464 1.3e-11 74.3 168 31.0
vmacro19315 Vaccinium macrocarpon HOM05D000045 ORTHO05D014656 2.0e-07 60.5 34 91.2
Pp3c6_25040 Physcomitrium patens HOM05D004423 ORTHO05D005464 2.9e-06 56.6 162 24.7


User provided reference genes

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