Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 1.4e-141 506.1 239 100.0
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 1.2e-58 230.7 191 65.4
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 6.4e-57 224.9 191 63.9
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 8.3e-57 224.6 196 62.2
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 1.3e-54 217.2 196 59.7
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 1.6e-52 210.3 204 57.8
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 8.9e-51 204.5 195 56.9
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 2.6e-50 203.0 187 58.8
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 7.6e-50 201.4 188 60.1
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 9.9e-50 201.1 198 55.6
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 1.3e-49 200.7 198 55.6
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 1.7e-49 200.3 187 58.8
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 2.2e-49 199.9 187 59.4
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 3.8e-49 199.1 188 56.9
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 6.4e-49 198.4 187 58.8
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 6.4e-49 198.4 195 51.8
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 1.9e-48 196.8 195 52.8
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 7.1e-48 194.9 187 56.1
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 1.3e-46 190.7 198 52.5
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 3.0e-46 189.5 194 54.1
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 3.9e-46 189.1 183 55.7
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 3.9e-46 189.1 182 54.9
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 5.1e-46 188.7 187 54.5
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 5.1e-46 188.7 187 56.1
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 8.7e-46 188.0 186 54.3
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 8.7e-46 188.0 187 54.0
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 1.1e-45 187.6 187 54.5
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 1.1e-45 187.6 186 54.3
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 1.5e-45 187.2 188 51.1
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 1.5e-45 187.2 234 45.3
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 1.9e-45 186.8 186 55.4
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 3.3e-45 186.0 190 53.2
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 3.3e-45 186.0 184 56.0
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 4.3e-45 185.7 187 52.4
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 7.3e-45 184.9 188 52.7
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 9.6e-45 184.5 186 53.2
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 2.8e-44 183.0 186 52.2
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 2.8e-44 183.0 191 50.8
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 1.4e-43 180.6 185 53.0
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 3.1e-43 179.5 185 53.0
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 3.1e-43 179.5 185 53.0
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 3.1e-43 179.5 185 53.0
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 3.1e-43 179.5 185 53.0
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 3.1e-43 179.5 191 51.8
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 5.2e-43 178.7 181 51.9
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 5.2e-43 178.7 191 51.3
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 6.9e-43 178.3 185 52.4
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 1.2e-42 177.6 191 51.3
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 1.2e-42 177.6 187 51.3
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 1.2e-42 177.6 238 45.0
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 1.5e-42 177.2 188 51.6
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 2.0e-42 176.8 198 51.0
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 2.6e-42 176.4 227 45.8
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 2.6e-42 176.4 185 50.8
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 3.4e-42 176.0 183 51.9
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 7.6e-42 174.9 184 50.5
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 9.9e-42 174.5 183 52.5
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 9.9e-42 174.5 187 52.4
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 1.3e-41 174.1 195 49.7
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 1.7e-41 173.7 192 48.4
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 2.2e-41 173.3 201 47.8
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 2.9e-41 172.9 206 48.5
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 4.9e-41 172.2 186 51.6
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 8.4e-41 171.4 187 48.7
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 8.4e-41 171.4 192 49.5
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 1.9e-40 170.2 179 51.4
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 2.4e-40 169.9 189 50.8
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 9.3e-40 167.9 185 50.3
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 1.2e-39 167.5 191 49.7
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 1.6e-39 167.2 186 51.1
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 2.7e-39 166.4 184 48.9
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 3.5e-39 166.0 195 48.7
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 7.8e-39 164.9 181 49.7
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 1.0e-38 164.5 182 48.4
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 1.0e-38 164.5 182 48.4
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 1.3e-38 164.1 186 48.4
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 1.7e-38 163.7 192 47.4
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 2.3e-38 163.3 196 46.4
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 5.1e-38 162.2 182 47.8
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 8.7e-38 161.4 242 41.3
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 1.5e-37 160.6 181 47.0
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 1.9e-37 160.2 182 50.0
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 2.5e-37 159.8 191 45.0
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 3.3e-37 159.5 182 47.8
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 5.6e-37 158.7 197 46.7
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 1.6e-36 157.1 170 51.8
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 2.1e-36 156.8 204 45.1
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 8.1e-36 154.8 185 47.6
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 1.4e-35 154.1 170 50.0
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 3.1e-35 152.9 198 42.9
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 1.5e-34 150.6 191 47.1
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 7.1e-32 141.7 167 51.5
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 2.7e-31 139.8 195 43.6
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 3.0e-30 136.3 144 50.0
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 2.5e-29 133.3 138 51.4
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 7.4e-29 131.7 133 54.1
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 7.4e-29 131.7 163 47.2
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 9.6e-29 131.3 133 51.9
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 1.1e-27 127.9 133 51.1
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 2.4e-27 126.7 131 51.9
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 2.6e-26 123.2 131 50.4
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 5.8e-26 122.1 163 42.3
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 1.9e-24 117.1 176 37.5
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 2.4e-24 116.7 230 35.2
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 4.2e-24 115.9 113 54.9
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 4.2e-24 115.9 106 57.5
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 1.2e-23 114.4 209 36.4
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 3.3e-21 106.3 176 35.8
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 4.3e-21 105.9 231 32.0
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 2.9e-17 93.2 185 32.4
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 4.3e-13 79.3 127 37.8
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 2.5e-08 63.5 85 45.9
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 2.1e-07 60.5 48 60.4
Cre01.g054650 Chlamydomonas reinhardtii HOM05D006843 ORTHO05D008517 1.8e-06 57.4 85 36.5


User provided reference genes

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