Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11699 Vaccinium macrocarpon HOM05D003670 ORTHO05D004767 6.3e-260 900.2 444 100.0
Rhsim06G0242300 Rhododendron simsii HOM05D003670 ORTHO05D004767 1.8e-177 626.3 370 83.5
CSS0006756 Camellia sinensis var. sinensis HOM05D003670 ORTHO05D004767 5.5e-171 604.7 411 75.7
Lsat_1_v5_gn_7_110680 Lactuca sativa HOM05D003670 ORTHO05D004767 2.2e-159 566.2 371 75.7
Manes.06G175700 Manihot esculenta HOM05D003670 ORTHO05D004767 8.3e-159 564.3 372 75.0
CiPaw.11G061900 Carya illinoinensis HOM05D003670 ORTHO05D004767 3.1e-158 562.4 379 73.1
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 2.0e-157 559.7 372 75.3
GSVIVG01036786001 Vitis vinifera HOM05D003670 ORTHO05D004767 2.0e-157 559.7 371 73.9
Nitab4.5_0006241g0010 Nicotiana tabacum HOM05D003670 ORTHO05D004767 2.7e-157 559.3 374 73.0
Peaxi162Scf00452g00333 Petunia axillaris HOM05D003670 ORTHO05D004767 7.7e-157 557.8 406 69.5
QL04p088520 Quercus lobata HOM05D003670 ORTHO05D004767 3.8e-156 555.4 396 69.7
PGSC0003DMG400022232 Solanum tuberosum HOM05D003670 ORTHO05D004767 5.0e-156 555.1 375 73.3
Potri.007G069300 Populus trichocarpa HOM05D003670 ORTHO05D004767 6.5e-156 554.7 363 75.5
Nitab4.5_0000029g0340 Nicotiana tabacum HOM05D003670 ORTHO05D004767 8.5e-156 554.3 375 72.3
HanXRQChr11g0335601 Helianthus annuus HOM05D003670 ORTHO05D004767 1.9e-155 553.1 371 73.3
Manes.14G010300 Manihot esculenta HOM05D003670 ORTHO05D004767 4.2e-155 552.0 370 73.5
CAN.G943.51 Capsicum annuum HOM05D003670 ORTHO05D004767 9.4e-155 550.8 375 72.5
Gohir.D13G127300 Gossypium hirsutum HOM05D003670 ORTHO05D004767 1.6e-154 550.1 415 68.7
Thecc.07G180400 Theobroma cacao HOM05D003670 ORTHO05D004767 2.1e-154 549.7 375 72.0
Gohir.A13G123400 Gossypium hirsutum HOM05D003670 ORTHO05D004767 6.1e-154 548.1 413 68.3
ECA236G3562 Erigeron canadensis HOM05D003670 ORTHO05D004767 1.0e-153 547.4 345 77.4
Gorai.013G142500 Gossypium raimondii HOM05D003670 ORTHO05D004767 1.0e-153 547.4 416 68.8
Sabra07G0056700 Salix brachista HOM05D003670 ORTHO05D004767 1.4e-153 547.0 347 77.2
MD10G1208500 Malus domestica HOM05D003670 ORTHO05D004767 4.0e-153 545.4 364 73.4
Lj3g0014239 Lotus japonicus HOM05D003670 ORTHO05D004767 5.2e-153 545.0 365 74.2
TPR.G33813 Trifolium pratense HOM05D003670 ORTHO05D004767 5.2e-153 545.0 378 72.0
COL.COLO4_32264 Corchorus olitorius HOM05D003670 ORTHO05D004767 6.8e-153 544.7 372 71.5
FvH4_3g14990 Fragaria vesca HOM05D003670 ORTHO05D004767 6.8e-153 544.7 364 73.1
FAN25G1710 Fragaria x ananassa HOM05D003670 ORTHO05D004767 6.8e-153 544.7 394 69.3
Solyc07g066580.3 Solanum lycopersicum HOM05D003670 ORTHO05D004767 6.8e-153 544.7 369 72.9
Sopen07g034740 Solanum pennellii HOM05D003670 ORTHO05D004767 6.8e-153 544.7 370 73.0
Prupe.4G134300 Prunus persica HOM05D003670 ORTHO05D004767 8.8e-153 544.3 367 72.2
FAN11G2825 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.2e-152 543.9 364 73.1
MSTRG.14566 Avicennia marina HOM05D003670 ORTHO05D004767 2.0e-152 543.1 371 72.5
Ca_03600_v3 Cicer arietinum L. HOM05D003670 ORTHO05D004767 2.0e-152 543.1 355 74.1
MD05G1228000 Malus domestica HOM05D003670 ORTHO05D004767 2.0e-152 543.1 367 72.8
Migut.H01671 Erythranthe guttata HOM05D003670 ORTHO05D004767 2.6e-152 542.7 361 74.0
FAN21G1395 Fragaria x ananassa HOM05D003670 ORTHO05D004767 4.4e-152 542.0 364 72.8
PGR031G1669 Punica granatum HOM05D003670 ORTHO05D004767 5.7e-152 541.6 408 68.4
Sp5g34280 Schrenkiella parvula HOM05D003670 ORTHO05D004767 1.7e-151 540.0 410 66.8
Medtr2g067080 Medicago truncatula HOM05D003670 ORTHO05D004767 2.8e-151 539.3 355 74.4
Nitab4.5_0005765g0040 Nicotiana tabacum HOM05D003670 ORTHO05D004767 2.8e-151 539.3 370 72.2
Psat1g013760 Pisum sativum HOM05D003670 ORTHO05D004767 2.8e-151 539.3 355 73.2
RcHm_v2.0_Chr5g0024611 Rosa chinensis HOM05D003670 ORTHO05D004767 2.8e-151 539.3 378 71.7
CANSAT80G2697 Cannabis sativa HOM05D003670 ORTHO05D004767 3.7e-151 538.9 345 74.8
Peaxi162Scf00006g00159 Petunia axillaris HOM05D003670 ORTHO05D004767 8.3e-151 537.7 405 67.2
Glyma.08G167100 Glycine max HOM05D003670 ORTHO05D004767 4.1e-150 535.4 356 73.6
TWI38G1711 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 4.1e-150 535.4 375 71.7
Oeu002796.1 Olea europaea HOM05D003670 ORTHO05D004767 7.0e-150 534.6 363 72.5
PSO675G6901 Papaver somniferum HOM05D003670 ORTHO05D004767 7.0e-150 534.6 338 75.7
Cc05_g16310 Coffea canephora HOM05D003670 ORTHO05D004767 9.1e-150 534.3 371 70.9
TAR583G0001 Trochodendron aralioides HOM05D003670 ORTHO05D004767 1.2e-149 533.9 367 70.6
Ciclev10005196m.g Citrus clementina HOM05D003670 ORTHO05D004767 1.6e-149 533.5 345 75.7
Duzib187G0441 Durio zibethinus HOM05D003670 ORTHO05D004767 2.0e-149 533.1 345 73.9
TWI39G0091 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 2.7e-149 532.7 374 71.7
Nn7g37780 Nelumbo nucifera HOM05D003670 ORTHO05D004767 4.5e-149 531.9 354 73.7
Aa31LG4G1790 Aethionema arabicum HOM05D003670 ORTHO05D004767 5.9e-149 531.6 407 65.8
Eucgr.F04458 Eucalyptus grandis HOM05D003670 ORTHO05D004767 5.9e-149 531.6 409 66.0
CsaV3_3G018980 Cucumis sativus L. HOM05D003670 ORTHO05D004767 7.7e-149 531.2 378 68.3
MBI02_g18168_MAGBIO Magnolia biondii HOM05D003670 ORTHO05D004767 1.3e-148 530.4 368 70.7
Phvul.005G050400 Phaseolus vulgaris HOM05D003670 ORTHO05D004767 1.7e-148 530.0 356 73.0
VMungo1080G1660 Vigna mungo HOM05D003670 ORTHO05D004767 5.0e-148 528.5 356 73.0
Lalb_Chr25g0284691 Lupinus albus HOM05D003670 ORTHO05D004767 6.6e-148 528.1 401 67.3
Ah.10g033690 Amaranthus hybridus HOM05D003670 ORTHO05D004767 1.1e-147 527.3 346 74.9
AT1G79230 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 2.5e-147 526.2 412 65.3
ATR0763G120 Amborella trichopoda HOM05D003670 ORTHO05D004767 5.5e-147 525.0 375 70.1
Thhalv10018699m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 5.5e-147 525.0 410 64.9
CARHR016930 Cardamine hirsuta HOM05D003670 ORTHO05D004767 2.8e-146 522.7 411 65.0
AL2G39700 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 3.6e-146 522.3 412 64.6
Cfa022976 Carpinus fangiana HOM05D003670 ORTHO05D004767 1.0e-145 520.8 379 67.8
Aqoxy1G01484 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 2.3e-145 519.6 363 68.9
Carub.0002s2610 Capsella rubella HOM05D003670 ORTHO05D004767 8.9e-145 517.7 410 64.4
BcaC08g45368 Brassica carinata HOM05D003670 ORTHO05D004767 1.5e-144 516.9 410 63.9
C06p30000 Brassica napus HOM05D003670 ORTHO05D004767 1.5e-144 516.9 410 63.9
BolC6t38160H Brassica oleracea HOM05D003670 ORTHO05D004767 2.0e-144 516.5 410 63.9
EL10Ac2g03264 Beta vulgaris HOM05D003670 ORTHO05D004767 2.6e-144 516.2 413 63.9
CARHR072860 Cardamine hirsuta HOM05D003670 ORTHO05D004767 2.6e-144 516.2 339 72.3
Potri.005G095300 Populus trichocarpa HOM05D003670 ORTHO05D004767 2.6e-144 516.2 334 74.6
Solyc02g078990.4 Solanum lycopersicum HOM05D003670 ORTHO05D004767 3.4e-144 515.8 378 67.2
Sed0012107 Sechium edule HOM05D003670 ORTHO05D004767 4.4e-144 515.4 378 66.7
BcaB02g07206 Brassica carinata HOM05D003670 ORTHO05D004767 5.7e-144 515.0 409 63.6
A07p27230 Brassica napus HOM05D003670 ORTHO05D004767 5.7e-144 515.0 410 63.7
BraA07t30367Z Brassica rapa HOM05D003670 ORTHO05D004767 5.7e-144 515.0 410 63.7
Os12g0608600 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 7.5e-144 514.6 351 70.4
BolC5t30186H Brassica oleracea HOM05D003670 ORTHO05D004767 1.7e-143 513.5 411 63.0
BcaC05g25571 Brassica carinata HOM05D003670 ORTHO05D004767 3.7e-143 512.3 411 63.5
Sopen02g023800 Solanum pennellii HOM05D003670 ORTHO05D004767 1.1e-142 510.8 345 72.2
C05p14650 Brassica napus HOM05D003670 ORTHO05D004767 1.4e-142 510.4 411 62.8
unitig_578.g16333 Utricularia gibba HOM05D003670 ORTHO05D004767 1.8e-142 510.0 372 65.6
Carub.0001s1620 Capsella rubella HOM05D003670 ORTHO05D004767 2.4e-142 509.6 410 63.2
Zm00001eb031400 Zea mays HOM05D003670 ORTHO05D004767 3.1e-142 509.2 349 70.5
BraA06t24401Z Brassica rapa HOM05D003670 ORTHO05D004767 4.1e-142 508.8 385 64.9
A07p44350 Brassica napus HOM05D003670 ORTHO05D004767 7.0e-142 508.1 388 64.7
BraA07t31943Z Brassica rapa HOM05D003670 ORTHO05D004767 7.0e-142 508.1 389 64.0
THA.LOC104812362 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 2.0e-141 506.5 411 62.5
Thhalv10007910m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 2.7e-141 506.1 342 70.5
BcaB05g25180 Brassica carinata HOM05D003670 ORTHO05D004767 3.5e-141 505.8 344 71.5
AUR62037644 Chenopodium quinoa HOM05D003670 ORTHO05D004767 4.5e-141 505.4 401 64.6
AUR62039184 Chenopodium quinoa HOM05D003670 ORTHO05D004767 1.3e-140 503.8 400 64.2
HPP92_013192 Vanilla planifolia HOM05D003670 ORTHO05D004767 5.0e-140 501.9 360 67.8
THA.LOC104813608 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 6.6e-140 501.5 338 70.1
BcaB02g06624 Brassica carinata HOM05D003670 ORTHO05D004767 1.2e-138 497.3 342 70.2
Sabra05G0078800 Salix brachista HOM05D003670 ORTHO05D004767 3.6e-138 495.7 395 64.3
A06p12380 Brassica napus HOM05D003670 ORTHO05D004767 4.7e-138 495.4 410 61.2
DCAR_019919 Daucus carota HOM05D003670 ORTHO05D004767 8.0e-138 494.6 369 68.0
Oeu043724.2 Olea europaea HOM05D003670 ORTHO05D004767 2.3e-137 493.0 337 70.3
AL1G28600 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 2.9e-135 486.1 338 68.3
Sp1g14610 Schrenkiella parvula HOM05D003670 ORTHO05D004767 2.4e-134 483.0 347 66.6
Glyma.15G260300 Glycine max HOM05D003670 ORTHO05D004767 7.0e-134 481.5 324 73.1
Aa31LG7G1000 Aethionema arabicum HOM05D003670 ORTHO05D004767 1.2e-133 480.7 342 66.4
Hund20101 Selenicereus undatus HOM05D003670 ORTHO05D004767 5.0e-132 475.3 346 68.8
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea HOM05D003670 ORTHO05D004767 1.5e-131 473.8 377 66.0
Duzib213G1009 Durio zibethinus HOM05D003670 ORTHO05D004767 1.5e-131 473.8 385 64.2
AT1G16460 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 1.9e-131 473.4 338 66.9
ClCG05G009800 Citrullus lanatus HOM05D003670 ORTHO05D000003 2.1e-130 469.9 379 62.8
MSTRG.7076 Avicennia marina HOM05D003670 ORTHO05D004767 6.2e-130 468.4 355 63.4
Sc06g0002800 Simmondsia chinensis HOM05D003670 ORTHO05D004767 6.2e-130 468.4 344 68.0
Nitab4.5_0000388g0140 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.3e-127 460.7 287 78.0
SEGI_21826 Sequoiadendron giganteum HOM05D003670 ORTHO05D004767 4.1e-126 455.7 413 57.4
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea HOM05D003670 ORTHO05D004767 7.0e-126 454.9 377 64.5
Lj2A15G76 Lonicera japonica HOM05D003670 ORTHO05D004767 1.6e-125 453.8 388 62.6
unitig_8.g4750 Utricularia gibba HOM05D003670 ORTHO05D004767 4.6e-125 452.2 368 61.7
MELO3C019489.2 Cucumis melo HOM05D003670 ORTHO05D004767 6.6e-124 448.4 295 72.9
PSO541G1524 Papaver somniferum HOM05D003670 ORTHO05D004767 9.5e-123 444.5 255 82.0
DCAR_016837 Daucus carota HOM05D003670 ORTHO05D004767 8.9e-121 438.0 322 64.3
C06p53140 Brassica napus HOM05D003670 ORTHO05D004767 1.2e-117 427.6 286 71.0
BolC6t40330H Brassica oleracea HOM05D003670 ORTHO05D004767 1.2e-117 427.6 286 71.0
Rhsim05G0210500 Rhododendron simsii HOM05D003670 ORTHO05D004767 2.1e-117 426.8 250 84.4
BcaC08g47490 Brassica carinata HOM05D003670 ORTHO05D004767 1.0e-116 424.5 345 62.0
Os02g0167100 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 5.1e-116 422.2 325 58.8
QL04p088965 Quercus lobata HOM05D003670 ORTHO05D004767 1.6e-114 417.2 270 75.2
SGA_v2.0_scaffold49G18190 Striga asiatica HOM05D003670 ORTHO05D004767 1.1e-113 414.5 287 70.4
Zm00001eb207410 Zea mays HOM05D003670 ORTHO05D004767 5.2e-113 412.1 330 59.1
Haze_07818 Corylus avellana HOM05D003670 ORTHO05D004767 2.0e-112 410.2 299 69.9
SGA_v2.0_scaffold186G40197 Striga asiatica HOM05D003670 ORTHO05D004767 7.6e-112 408.3 250 72.8
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 1.9e-110 403.7 261 77.8
Mapoly0058s0078 Marchantia polymorpha HOM05D003670 ORTHO05D004767 2.4e-110 403.3 358 53.4
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis HOM05D003670 ORTHO05D004767 4.6e-109 399.1 361 55.1
CDE06G2006 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 3.5e-101 372.9 242 71.5
Pp3c9_17670 Physcomitrium patens HOM05D003670 ORTHO05D004767 7.3e-99 365.2 356 50.6
HPP92_013209 Vanilla planifolia HOM05D003670 ORTHO05D004767 3.6e-98 362.8 360 54.4
SMO119G0061 Selaginella moellendorffii HOM05D003670 ORTHO05D004767 2.0e-96 357.1 325 54.5
Actinidia12766 Actinidia chinensis HOM05D003670 ORTHO05D004767 1.8e-92 344.0 198 84.3
CDE02G0962 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 2.4e-89 333.6 234 67.9
Cpa.g.sc34.17 Carica papaya HOM05D003670 ORTHO05D004767 2.2e-87 327.0 214 74.8
FAN16G2550 Fragaria x ananassa HOM05D003670 ORTHO05D004767 2.2e-87 327.0 225 70.7
MD05G1228700 Malus domestica HOM05D003670 ORTHO05D004767 2.7e-85 320.1 225 69.8
RcHm_v2.0_Chr5g0024731 Rosa chinensis HOM05D003670 ORTHO05D004767 3.9e-76 289.7 222 68.5
A02p22680 Brassica napus HOM05D003670 ORTHO05D004767 5.0e-71 272.7 370 43.8
C02p36310 Brassica napus HOM05D003670 ORTHO05D004767 3.9e-68 263.1 219 62.1
MCO09G588 Micromonas commoda HOM05D003670 ORTHO05D004767 3.1e-65 253.4 326 44.5
CBR_g17038 Chara braunii HOM05D003670 ORTHO05D004767 2.0e-64 250.8 373 39.4
Cre13.g607050 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D004767 2.2e-63 247.3 354 39.8
PRCOL_00006295 Prasinoderma coloniale HOM05D003670 ORTHO05D004767 5.0e-63 246.1 333 42.0
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 2.8e-50 203.8 153 68.0
Aqoxy1G03000 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 3.5e-48 196.8 114 78.1
Cfa026738 Carpinus fangiana HOM05D003670 ORTHO05D004767 2.9e-39 167.2 363 34.7
MD05G1228600 Malus domestica HOM05D003670 ORTHO05D004767 8.5e-39 165.6 142 62.0
C03p82980 Brassica napus HOM05D003670 ORTHO05D004767 4.0e-36 156.8 94 83.0
BcaC01g00674 Brassica carinata HOM05D003670 ORTHO05D004767 8.8e-36 155.6 92 83.7
BolC1t01654H Brassica oleracea HOM05D003670 ORTHO05D004767 8.8e-36 155.6 131 64.1
BcaC04g18607 Brassica carinata HOM05D003670 ORTHO05D004767 3.4e-35 153.7 92 82.6
CAN.G891.1 Capsicum annuum HOM05D003670 ORTHO05D004767 4.4e-35 153.3 94 81.9
C01p17180 Brassica napus HOM05D003670 ORTHO05D004767 5.7e-35 152.9 131 63.4
BolC9t58925H Brassica oleracea HOM05D003670 ORTHO05D004767 3.7e-34 150.2 131 62.6
Oeu010650.2 Olea europaea HOM05D003670 ORTHO05D004767 3.8e-31 140.2 101 72.3
Lsat_1_v5_gn_4_93521 Lactuca sativa HOM05D003670 ORTHO05D004767 8.3e-26 122.5 66 84.8
BolC7t42971H Brassica oleracea HOM05D003670 ORTHO05D004767 1.3e-23 115.2 133 51.1
BcaC06g34801 Brassica carinata HOM05D003670 ORTHO05D004767 6.6e-23 112.8 92 68.5
Cpa.g.sc34.16 Carica papaya HOM05D003670 ORTHO05D004767 8.6e-23 112.5 104 56.7
Mapoly0032s0014 Marchantia polymorpha HOM05D003670 ORTHO05D031137 5.6e-22 109.8 365 26.0
Oeu034061.1 Olea europaea HOM05D003670 ORTHO05D020012 8.0e-21 105.9 103 54.4
Solyc06g009850.3 Solanum lycopersicum HOM05D003670 ORTHO05D014971 5.2e-20 103.2 114 50.0
CDE06G0877 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 1.2e-19 102.1 54 81.5
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis HOM05D003670 ORTHO05D031137 1.2e-16 92.0 242 31.8
BcaC03g15876 Brassica carinata HOM05D003670 ORTHO05D020012 6.0e-16 89.7 64 62.5
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 3.9e-15 87.0 51 78.4
QL04p088979 Quercus lobata HOM05D003670 ORTHO05D004767 8.1e-13 79.3 64 62.5
Sopen06g004510 Solanum pennellii HOM05D003670 ORTHO05D014971 2.0e-11 74.7 47 72.3
BcaC02g07679 Brassica carinata HOM05D003670 ORTHO05D014971 1.3e-10 72.0 42 76.2
Solyc06g009860.1 Solanum lycopersicum HOM05D003670 ORTHO05D020012 6.4e-10 69.7 44 72.7
C06p40160 Brassica napus HOM05D003670 ORTHO05D020012 8.3e-10 69.3 48 62.5
BolC6t39098H Brassica oleracea HOM05D003670 ORTHO05D020012 8.3e-10 69.3 48 62.5
Hma1.2p1_1039F.1_g250810 Hydrangea macrophylla HOM05D001854 ORTHO05D001800 3.9e-07 60.5 37 75.7
Lsat_1_v5_gn_8_160501 Lactuca sativa HOM05D003670 ORTHO05D002209 3.9e-07 60.5 34 85.3


User provided reference genes

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