Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 3.1e-151 538.5 282 100.0
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 5.8e-41 172.2 221 55.2
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 3.3e-20 103.2 223 42.6
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 3.7e-19 99.8 63 77.8
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 1.4e-18 97.8 220 40.5
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.2e-17 94.7 58 81.0
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 2.0e-17 94.0 82 63.4
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 2.6e-17 93.6 77 63.6
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 3.4e-17 93.2 88 61.4
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 5.8e-17 92.4 79 63.3
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 5.8e-17 92.4 81 61.7
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 7.6e-17 92.0 106 47.2
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 7.6e-17 92.0 56 85.7
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 1.3e-16 91.3 97 53.6
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 1.7e-16 90.9 67 71.6
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 1.7e-16 90.9 55 83.6
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 2.2e-16 90.5 167 40.1
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 2.9e-16 90.1 70 65.7
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 2.9e-16 90.1 58 81.0
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 2.9e-16 90.1 71 67.6
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 3.8e-16 89.7 70 64.3
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 3.8e-16 89.7 101 51.5
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 3.8e-16 89.7 53 84.9
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 3.8e-16 89.7 118 43.2
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 3.8e-16 89.7 55 81.8
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 3.8e-16 89.7 66 72.7
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 3.8e-16 89.7 90 55.6
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 4.9e-16 89.4 126 46.0
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 4.9e-16 89.4 71 66.2
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 4.9e-16 89.4 53 84.9
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 6.5e-16 89.0 58 77.6
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 6.5e-16 89.0 77 61.0
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 6.5e-16 89.0 67 70.1
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 1.1e-15 88.2 54 83.3
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 1.1e-15 88.2 77 62.3
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.1e-15 88.2 53 84.9
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.1e-15 88.2 53 84.9
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 1.1e-15 88.2 53 84.9
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 1.1e-15 88.2 90 55.6
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 1.1e-15 88.2 90 55.6
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.1e-15 88.2 81 60.5
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 1.9e-15 87.4 53 84.9
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 1.9e-15 87.4 52 86.5
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 1.9e-15 87.4 71 64.8
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 1.9e-15 87.4 52 84.6
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 2.5e-15 87.0 67 68.7
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 2.5e-15 87.0 78 59.0
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 2.5e-15 87.0 52 84.6
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 2.5e-15 87.0 56 78.6
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 2.5e-15 87.0 66 69.7
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 3.2e-15 86.7 69 65.2
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 3.2e-15 86.7 77 59.7
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 4.2e-15 86.3 79 57.0
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 4.2e-15 86.3 78 56.4
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 4.2e-15 86.3 78 56.4
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 4.2e-15 86.3 78 56.4
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 4.2e-15 86.3 57 73.7
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 5.5e-15 85.9 49 87.8
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 7.1e-15 85.5 76 59.2
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 7.1e-15 85.5 54 79.6
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 7.1e-15 85.5 52 82.7
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 9.3e-15 85.1 72 66.7
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 1.2e-14 84.7 78 57.7
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 1.6e-14 84.3 69 63.8
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 1.6e-14 84.3 52 80.8
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.6e-14 84.3 78 55.1
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 1.6e-14 84.3 77 55.8
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 2.1e-14 84.0 60 71.7
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 2.7e-14 83.6 53 79.2
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 2.7e-14 83.6 53 75.5
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 3.5e-14 83.2 55 76.4
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 3.5e-14 83.2 73 61.6
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 4.6e-14 82.8 57 70.2
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 4.6e-14 82.8 71 60.6
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 6.0e-14 82.4 73 58.9
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 7.9e-14 82.0 90 54.4
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 1.0e-13 81.6 53 75.5
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 1.8e-13 80.9 52 73.1
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 2.3e-13 80.5 78 56.4
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 3.9e-13 79.7 73 57.5
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 5.1e-13 79.3 53 71.7
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 5.1e-13 79.3 188 35.1
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 5.1e-13 79.3 54 74.1
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 8.7e-13 78.6 70 58.6
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 8.7e-13 78.6 55 69.1
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 8.7e-13 78.6 55 69.1
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 8.7e-13 78.6 51 80.4
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 8.7e-13 78.6 67 58.2
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 1.1e-12 78.2 73 56.2
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 1.1e-12 78.2 54 72.2
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 1.5e-12 77.8 67 59.7
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 1.5e-12 77.8 53 71.7
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 1.9e-12 77.4 54 70.4
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 1.9e-12 77.4 51 78.4
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 2.5e-12 77.0 54 70.4
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 1.3e-11 74.7 68 57.4
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 1.3e-11 74.7 51 70.6
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 2.1e-11 73.9 50 70.0
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 2.1e-11 73.9 52 73.1
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 3.7e-11 73.2 45 80.0
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 1.8e-10 70.9 53 64.2
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 1.8e-10 70.9 78 52.6
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 6.9e-10 68.9 60 58.3
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 7.6e-09 65.5 55 63.6
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 2.5e-07 60.5 50 60.0
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 1.2e-06 58.2 68 51.5


User provided reference genes

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