Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 0.0e+00 1249.2 622 100.0
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 1.4e-300 1035.8 622 84.6
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 3.1e-244 848.6 627 70.2
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 7.1e-225 784.3 627 66.7
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 1.8e-191 673.3 619 59.8
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 3.7e-181 639.0 620 56.1
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 3.1e-180 636.0 615 55.6
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 2.0e-179 633.3 621 55.6
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 1.3e-178 630.6 615 54.6
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 1.1e-177 627.5 615 55.1
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 2.5e-177 626.3 622 55.3
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 4.2e-177 625.5 617 53.6
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 1.2e-176 624.0 620 55.0
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 1.6e-176 623.6 622 55.3
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 1.0e-175 620.9 615 54.0
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 2.3e-175 619.8 620 54.4
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 2.3e-175 619.8 619 53.8
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 6.7e-175 618.2 615 54.8
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 1.2e-174 617.5 621 53.8
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 2.0e-174 616.7 618 53.9
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 1.3e-173 614.0 619 53.6
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 1.3e-173 614.0 618 53.7
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 3.7e-173 612.5 615 54.1
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 8.2e-173 611.3 615 54.8
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 1.6e-171 607.1 615 54.1
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 2.7e-171 606.3 616 53.2
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 1.3e-170 604.0 722 49.4
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 1.7e-170 603.6 621 54.1
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 3.2e-169 599.4 622 52.9
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 4.2e-169 599.0 622 53.2
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 7.2e-169 598.2 619 53.5
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 1.6e-168 597.0 617 53.0
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 9.8e-166 587.8 615 53.2
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 8.3e-165 584.7 619 51.9
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 1.1e-164 584.3 614 52.4
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 1.8e-164 583.6 617 52.0
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 4.1e-164 582.4 621 52.3
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 5.4e-164 582.0 640 51.4
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 1.2e-163 580.9 618 52.8
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 1.6e-163 580.5 618 52.8
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 7.7e-163 578.2 616 51.6
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 1.7e-162 577.0 617 52.2
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 1.1e-161 574.3 617 51.2
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 1.9e-161 573.5 622 51.4
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 7.2e-161 571.6 625 51.4
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 3.6e-160 569.3 616 50.8
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 6.1e-160 568.5 619 49.4
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 6.1e-160 568.5 590 52.7
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 1.0e-159 567.8 622 51.1
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 1.2e-158 564.3 616 50.2
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 2.6e-158 563.1 615 49.9
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 7.5e-158 561.6 616 49.8
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 8.3e-157 558.1 623 49.8
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 1.4e-156 557.4 616 49.2
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 1.5e-153 547.4 644 49.2
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 1.9e-153 547.0 672 46.7
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 1.9e-153 547.0 615 49.1
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 3.3e-153 546.2 626 48.9
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 6.1e-152 542.0 672 46.3
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 1.0e-151 541.2 618 49.5
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 2.7e-147 526.6 624 47.0
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 1.3e-146 524.2 593 51.1
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 3.3e-145 519.6 555 52.6
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 2.8e-144 516.5 559 50.4
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 9.8e-142 508.1 576 51.4
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 6.4e-141 505.4 615 46.7
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 8.3e-141 505.0 584 48.6
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 1.2e-139 501.1 631 48.2
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 2.3e-138 496.9 615 46.0
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 6.6e-138 495.4 589 47.4
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 3.1e-135 486.5 567 48.5
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 2.9e-133 479.9 401 60.8
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 4.3e-129 466.1 459 54.7
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 2.9e-125 453.4 570 45.3
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 4.3e-121 439.5 555 46.8
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 2.6e-118 430.3 644 42.5
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 1.1e-111 408.3 374 57.8
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 2.1e-107 394.0 412 57.0
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 4.6e-107 392.9 464 46.1
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 6.2e-104 382.5 615 39.7
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 2.2e-101 374.0 419 53.0
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 2.7e-99 367.1 626 37.4
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 1.0e-93 348.6 616 36.2
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 7.4e-89 332.4 305 56.7
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 9.0e-87 325.5 306 56.2
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 1.0e-85 322.0 304 56.2
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 6.1e-83 312.8 400 45.8
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 1.1e-76 292.0 471 39.7
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 9.1e-71 272.3 314 48.1
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 1.5e-65 255.0 471 38.6
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 3.3e-65 253.8 274 54.4
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 7.7e-62 242.7 220 55.5
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 3.2e-52 210.7 244 51.2
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 1.4e-50 205.3 232 48.3
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 1.6e-46 191.8 127 67.7
CARHR017120 Cardamine hirsuta HOM05D007146 ORTHO05D008971 5.0e-45 186.8 164 58.5
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 1.8e-42 178.3 227 44.1
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 1.8e-42 178.3 227 44.1
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 1.4e-39 168.7 117 60.7
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 4.1e-39 167.2 252 44.8
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 1.0e-37 162.5 200 48.5
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 4.3e-36 157.1 97 72.2
Ah.06g187020 Amaranthus hybridus HOM05D007146 ORTHO05D008971 6.4e-32 143.3 217 41.0
Sc07g0003080 Simmondsia chinensis HOM05D007146 ORTHO05D008971 1.5e-28 132.1 101 61.4
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 3.6e-27 127.5 145 52.4
Haze_08528 Corylus avellana HOM05D007146 ORTHO05D008971 8.1e-19 99.8 158 39.2
MBI02_g40068_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 1.7e-16 92.0 165 38.8
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 2.2e-08 65.1 122 38.5
Cfa023972 Carpinus fangiana HOM05D007146 ORTHO05D008971 1.9e-07 62.0 170 30.6


User provided reference genes

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