Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11593 Vaccinium macrocarpon HOM05D004836 ORTHO05D005150 1.4e-127 459.9 288 100.0
Rhsim06G0230000 Rhododendron simsii HOM05D004836 ORTHO05D005150 6.2e-91 338.2 261 87.7
Actinidia05002 Actinidia chinensis HOM05D004836 ORTHO05D005150 5.5e-55 218.8 265 64.9
Actinidia37154 Actinidia chinensis HOM05D004836 ORTHO05D005150 7.0e-50 201.8 264 64.0
Dinv40862 Davidia involucrata HOM05D004836 ORTHO05D005150 4.0e-45 186.0 265 61.1
Dinv10337 Davidia involucrata HOM05D004836 ORTHO05D005150 4.5e-41 172.6 267 59.2
Migut.M01650 Erythranthe guttata HOM05D004836 ORTHO05D005150 3.0e-37 159.8 257 56.8
Nitab4.5_0007415g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 1.2e-36 157.9 263 55.5
CAN.G623.12 Capsicum annuum HOM05D004836 ORTHO05D005150 3.4e-36 156.4 257 56.4
PGSC0003DMG400022276 Solanum tuberosum HOM05D004836 ORTHO05D005150 1.3e-35 154.5 259 54.4
Solyc07g065600.3 Solanum lycopersicum HOM05D004836 ORTHO05D005150 6.3e-35 152.1 261 55.2
Sopen07g033810 Solanum pennellii HOM05D004836 ORTHO05D005150 1.8e-34 150.6 257 55.3
Nitab4.5_0002736g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 4.5e-33 146.0 264 54.2
CSS0029600 Camellia sinensis var. sinensis HOM05D004836 ORTHO05D005150 1.7e-32 144.1 256 57.0
SGA_v2.0_scaffold168G38564 Striga asiatica HOM05D004836 ORTHO05D005150 5.0e-32 142.5 256 53.1
Oeu014362.2 Olea europaea HOM05D004836 ORTHO05D005150 8.6e-32 141.7 262 48.5
TWI39G0854 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 4.7e-30 136.0 261 51.3
Cc05_g14960 Coffea canephora HOM05D004836 ORTHO05D005150 1.8e-29 134.0 281 50.9
Atru.chr2.3693 Acer truncatum HOM05D004836 ORTHO05D005150 3.0e-29 133.3 263 43.3
TAR626G1210 Trochodendron aralioides HOM05D004836 ORTHO05D005150 4.0e-29 132.9 257 54.1
SGA_v2.0_scaffold171G38861 Striga asiatica HOM05D004836 ORTHO05D005150 5.2e-29 132.5 256 52.3
Sc03g0011420 Simmondsia chinensis HOM05D004836 ORTHO05D005150 1.8e-26 124.0 269 44.6
Actinidia30399 Actinidia chinensis HOM05D004836 ORTHO05D005150 3.2e-26 123.2 119 57.1
Sc03g0011330 Simmondsia chinensis HOM05D004836 ORTHO05D005150 5.4e-26 122.5 269 44.6
Thecc.07G013200 Theobroma cacao HOM05D004836 ORTHO05D005150 5.9e-25 119.0 261 50.2
TAR624G0729 Trochodendron aralioides HOM05D004836 ORTHO05D005150 7.8e-25 118.6 257 50.2
PGR083G2228 Punica granatum HOM05D004836 ORTHO05D005150 1.0e-24 118.2 263 46.8
GSVIVG01014692001 Vitis vinifera HOM05D004836 ORTHO05D005150 1.0e-24 118.2 264 47.7
Lsat_1_v5_gn_9_90560 Lactuca sativa HOM05D004836 ORTHO05D005150 3.9e-24 116.3 264 35.6
Glyma.20G112200 Glycine max HOM05D004836 ORTHO05D005150 1.1e-23 114.8 259 47.5
Glyma.10G277400 Glycine max HOM05D004836 ORTHO05D005150 1.5e-23 114.4 272 42.3
FAN10G2990 Fragaria x ananassa HOM05D004836 ORTHO05D005150 2.5e-23 113.6 270 43.7
CANSAT11G1576 Cannabis sativa HOM05D004836 ORTHO05D005150 4.3e-23 112.8 259 48.6
CsaV3_7G011380 Cucumis sativus L. HOM05D004836 ORTHO05D005150 5.6e-23 112.5 266 47.4
HanXRQChr03g0074011 Helianthus annuus HOM05D004836 ORTHO05D005150 5.6e-23 112.5 266 43.2
Prupe.7G022200 Prunus persica HOM05D004836 ORTHO05D005150 5.6e-23 112.5 265 50.9
Ah.06g181450 Amaranthus hybridus HOM05D004836 ORTHO05D005150 7.3e-23 112.1 256 47.3
TWI38G0981 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 1.6e-22 110.9 264 46.2
Potri.001G368200 Populus trichocarpa HOM05D004836 ORTHO05D005150 3.6e-22 109.8 259 45.9
Manes.15G059500 Manihot esculenta HOM05D004836 ORTHO05D005150 4.7e-22 109.4 265 46.0
Peaxi162Scf00139g01321 Petunia axillaris HOM05D004836 ORTHO05D005150 8.0e-22 108.6 283 44.9
CiPaw.11G204300 Carya illinoinensis HOM05D004836 ORTHO05D005150 4.0e-21 106.3 264 45.5
Prupe.5G032900 Prunus persica HOM05D004836 ORTHO05D005150 4.0e-21 106.3 265 49.8
AUR62017108 Chenopodium quinoa HOM05D004836 ORTHO05D005150 3.4e-20 103.2 262 33.6
RcHm_v2.0_Chr1g0333641 Rosa chinensis HOM05D004836 ORTHO05D005150 4.4e-20 102.8 261 44.4
Manes.03G141700 Manihot esculenta HOM05D004836 ORTHO05D005150 5.8e-20 102.4 265 45.3
FAN06G1091 Fragaria x ananassa HOM05D004836 ORTHO05D005150 7.5e-20 102.1 284 40.8
DCAR_013235 Daucus carota HOM05D004836 ORTHO05D005150 1.7e-19 100.9 184 39.7
FAN03G2987 Fragaria x ananassa HOM05D004836 ORTHO05D005150 2.2e-19 100.5 265 46.8
MD11G1029700 Malus domestica HOM05D004836 ORTHO05D005150 2.2e-19 100.5 266 49.2
CANSAT35G0529 Cannabis sativa HOM05D004836 ORTHO05D005150 4.9e-19 99.4 278 31.3
Gohir.A01G091700 Gossypium hirsutum HOM05D004836 ORTHO05D005150 6.4e-19 99.0 260 39.6
MD00G1168400 Malus domestica HOM05D004836 ORTHO05D005150 2.4e-18 97.1 258 48.8
Sed0002835 Sechium edule HOM05D004836 ORTHO05D005150 3.2e-18 96.7 268 44.0
Gorai.002G100500 Gossypium raimondii HOM05D004836 ORTHO05D005150 7.0e-18 95.5 258 45.7
ECA240G1942 Erigeron canadensis HOM05D004836 ORTHO05D000368 9.2e-18 95.1 101 48.5
AUR62036461 Chenopodium quinoa HOM05D004836 ORTHO05D005150 1.2e-17 94.7 268 31.0
Phvul.003G265300 Phaseolus vulgaris HOM05D004836 ORTHO05D005150 2.7e-17 93.6 261 41.8
Phvul.007G023800 Phaseolus vulgaris HOM05D004836 ORTHO05D005150 3.5e-17 93.2 265 45.7
Sc16g0008100 Simmondsia chinensis HOM05D004836 ORTHO05D005150 6.0e-17 92.4 270 38.5
FAN01G1635 Fragaria x ananassa HOM05D004836 ORTHO05D005150 1.7e-16 90.9 263 43.3
Gohir.D01G061900 Gossypium hirsutum HOM05D004836 ORTHO05D005150 1.7e-16 90.9 257 38.9
HanXRQChr13g0408421 Helianthus annuus HOM05D004836 ORTHO05D005150 3.9e-16 89.7 256 41.0
Ciclev10007227m.g Citrus clementina HOM05D004836 ORTHO05D005150 5.0e-16 89.4 266 45.9
Hund20644 Selenicereus undatus HOM05D004836 ORTHO05D005150 5.0e-16 89.4 268 41.8
Lalb_Chr21g0309081 Lupinus albus HOM05D004836 ORTHO05D005150 1.1e-15 88.2 110 44.5
EL10Ac4g07562 Beta vulgaris HOM05D004836 ORTHO05D005150 2.5e-15 87.0 256 43.0
FvH4_7g06090 Fragaria vesca HOM05D004836 ORTHO05D005150 9.5e-15 85.1 268 41.0
Eucgr.F02046 Eucalyptus grandis HOM05D004836 ORTHO05D005150 2.1e-14 84.0 260 39.6
Lj1A890T52 Lonicera japonica HOM05D004836 ORTHO05D005150 6.2e-14 82.4 232 43.5
Lalb_Chr06g0166281 Lupinus albus HOM05D004836 ORTHO05D005150 1.8e-13 80.9 252 42.5
Nn1g03169 Nelumbo nucifera HOM05D004836 ORTHO05D005150 1.8e-13 80.9 268 39.6
unitig_22.g5946 Utricularia gibba HOM05D004836 ORTHO05D005150 2.3e-13 80.5 255 34.9
COL.COLO4_09837 Corchorus olitorius HOM05D004836 ORTHO05D005150 8.9e-13 78.6 141 40.4
Gorai.013G152400 Gossypium raimondii HOM05D004836 ORTHO05D005150 8.9e-13 78.6 133 36.8
Hund23108 Selenicereus undatus HOM05D004836 ORTHO05D005150 8.9e-13 78.6 275 40.7
Gohir.D13G135900 Gossypium hirsutum HOM05D004836 ORTHO05D005150 1.2e-12 78.2 133 36.8
CSS0003147 Camellia sinensis var. sinensis HOM05D004836 ORTHO05D005150 3.4e-12 76.6 180 58.9
TPR.G26295 Trifolium pratense HOM05D004836 ORTHO05D005150 9.8e-12 75.1 125 38.4
Sabra16G0241300 Salix brachista HOM05D004836 ORTHO05D005150 1.3e-11 74.7 262 35.9
MD03G1024600 Malus domestica HOM05D004836 ORTHO05D005150 2.2e-11 73.9 265 40.4
Medtr1g111660 Medicago truncatula HOM05D004836 ORTHO05D005150 3.7e-11 73.2 127 36.2
VMungo0720G3177 Vigna mungo HOM05D004836 ORTHO05D005150 4.9e-11 72.8 252 44.8
MELO3C024947.2 Cucumis melo HOM05D004836 ORTHO05D005150 8.3e-11 72.0 271 42.1
Duzib213G0869 Durio zibethinus HOM05D004836 ORTHO05D005150 1.1e-10 71.6 320 36.6
THA.LOC104811669 Tarenaya hassleriana HOM05D004836 ORTHO05D005150 1.1e-10 71.6 179 35.2
Haze_09829 Corylus avellana HOM05D004836 ORTHO05D005150 1.4e-10 71.2 267 40.8
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 1.9e-10 70.9 86 46.5
Aqoxy4G02292 Aquilegia oxysepala HOM05D004836 ORTHO05D005150 2.4e-10 70.5 63 58.7
arahy.Tifrunner.gnm1.ann1.LI7RG4 Arachis hypogaea HOM05D004836 ORTHO05D005150 4.1e-10 69.7 264 37.5
Lj5g0000015 Lotus japonicus HOM05D004836 ORTHO05D005150 4.1e-10 69.7 259 32.0
MD00G1168200 Malus domestica HOM05D004836 ORTHO05D005150 4.1e-10 69.7 185 35.7
CDE04G0223 Ceratophyllum demersum HOM05D000588 ORTHO05D005150 5.4e-10 69.3 268 45.1
Oeu046935.1 Olea europaea HOM05D004836 ORTHO05D005150 1.2e-09 68.2 48 83.3
AL8G31380 Arabidopsis lyrata HOM05D004836 ORTHO05D005150 1.6e-09 67.8 272 38.6
MBI15_g03895_MAGBIO Magnolia biondii HOM05D004836 ORTHO05D005150 2.7e-09 67.0 236 43.6
ClCG09G021380 Citrullus lanatus HOM05D004836 ORTHO05D005150 4.6e-09 66.2 274 41.2
vmacro09649 Vaccinium macrocarpon HOM05D000835 ORTHO05D002122 1.0e-08 65.1 167 35.3
Aa31LG3G11720 Aethionema arabicum HOM05D004836 ORTHO05D005150 1.3e-08 64.7 157 31.8
QL08p004015 Quercus lobata HOM05D004836 ORTHO05D005150 1.3e-08 64.7 266 43.6
Ca_25650_v3 Cicer arietinum L. HOM05D004836 ORTHO05D005150 5.1e-08 62.8 262 39.3
Gohir.A13G132500 Gossypium hirsutum HOM05D004836 ORTHO05D005150 8.6e-08 62.0 257 37.4
Thhalv10012421m.g Eutrema salsugineum HOM05D004836 ORTHO05D005150 2.5e-07 60.5 79 43.0
Psat6g230520 Pisum sativum HOM05D004836 ORTHO05D005150 9.5e-07 58.5 255 38.0
SEGI_26437 Sequoiadendron giganteum HOM05D014698 ORTHO05D016532 9.5e-07 58.5 89 40.4
BolC3t14046H Brassica oleracea HOM05D004836 ORTHO05D005150 2.1e-06 57.4 71 45.1
CARHR269190 Cardamine hirsuta HOM05D004836 ORTHO05D005150 2.1e-06 57.4 279 38.4
MD11G1030200 Malus domestica HOM05D004836 ORTHO05D005150 2.1e-06 57.4 232 47.4
SEGI_04158 Sequoiadendron giganteum HOM05D014698 ORTHO05D016532 2.1e-06 57.4 89 39.3
Pp3c1_42830 Physcomitrium patens HOM05D014698 ORTHO05D016532 2.8e-06 57.0 62 50.0
Sp6g17700 Schrenkiella parvula HOM05D004836 ORTHO05D005150 2.8e-06 57.0 269 39.0
BraA03t10683Z Brassica rapa HOM05D004836 ORTHO05D005150 6.2e-06 55.8 77 40.3
HPP92_018201 Vanilla planifolia HOM05D004836 ORTHO05D005150 8.1e-06 55.5 248 27.8


User provided reference genes

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