Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 9.5e-281 969.5 494 100.0
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 3.3e-92 343.2 460 45.4
vmacro02192 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 2.6e-84 317.0 172 95.9
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 1.3e-27 128.6 383 28.7
vmacro09750 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 5.4e-26 123.2 312 30.1
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.2e-25 122.1 258 31.0
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 1.3e-24 118.6 197 36.0
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.5e-23 114.4 255 29.8
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.3e-23 113.6 255 29.8
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.1e-22 111.3 245 29.8
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.8e-21 106.3 300 28.0
vmacro06592 Vaccinium macrocarpon HOM05D000211 ORTHO05D002285 6.8e-21 106.3 313 30.4
Rhsim01G0048500 Rhododendron simsii HOM05D010265 ORTHO05D009356 5.8e-20 103.2 188 38.3
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.8e-20 103.2 243 29.2
vmacro12730 Vaccinium macrocarpon HOM05D002015 ORTHO05D011057 2.9e-19 100.9 125 43.2
Rhsim01G0138200 Rhododendron simsii HOM05D010265 ORTHO05D009356 3.8e-19 100.5 188 38.8
Rhsim08G0243500 Rhododendron simsii HOM05D010265 ORTHO05D009356 4.9e-19 100.1 171 42.1
Rhsim06G0241200 Rhododendron simsii HOM05D010265 ORTHO05D009356 6.4e-19 99.8 188 37.2
Rhsim13G0191800 Rhododendron simsii HOM05D010265 ORTHO05D009356 6.4e-19 99.8 188 38.3
RhsimUnG0052900 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-18 99.0 454 25.1
Rhsim05G0113800 Rhododendron simsii HOM05D010265 ORTHO05D009356 4.2e-18 97.1 175 39.4
vmacro16299 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 4.2e-18 97.1 386 27.7
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 5.4e-18 96.7 176 34.1
Rhsim09G0039900 Rhododendron simsii HOM05D008219 ORTHO05D009356 7.1e-18 96.3 498 24.1
RhsimUnG0000500 Rhododendron simsii HOM05D010265 ORTHO05D009356 2.7e-17 94.4 170 38.2
Rhsim10G0189500 Rhododendron simsii HOM05D019536 ORTHO05D011057 4.6e-17 93.6 219 29.2
Rhsim12G0140100 Rhododendron simsii HOM05D010265 ORTHO05D009356 6.0e-17 93.2 126 49.2
Rhsim13G0074200 Rhododendron simsii HOM05D010265 ORTHO05D009356 1.3e-16 92.0 133 42.1
vmacro12740 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 6.6e-16 89.7 289 27.3
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 1.1e-15 89.0 222 30.2
Rhsim10G0184600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-15 89.0 460 25.4
Actinidia23250 Actinidia chinensis HOM05D012898 ORTHO05D009356 2.5e-15 87.8 282 27.7
vmacro21273 Vaccinium macrocarpon HOM05D000097 ORTHO05D009673 7.3e-15 86.3 212 33.0
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.6e-14 85.1 209 28.7
vmacro17834 Vaccinium macrocarpon HOM05D000412 ORTHO05D002774 1.6e-14 85.1 157 34.4
Rhsim02G0102300 Rhododendron simsii HOM05D000030 ORTHO05D000031 2.1e-14 84.7 204 33.3
Rhsim05G0211800 Rhododendron simsii HOM05D010265 ORTHO05D009356 3.6e-14 84.0 92 53.3
Rhsim09G0042800 Rhododendron simsii HOM05D017214 ORTHO05D018100 8.1e-14 82.8 378 25.7
CSS0023562 Camellia sinensis var. sinensis HOM05D000557 ORTHO05D011057 2.4e-13 81.3 214 26.2
CSS0016458 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.1e-13 80.9 179 33.0
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 5.3e-13 80.1 92 45.7
Rhsim11G0056900 Rhododendron simsii HOM05D010265 ORTHO05D009356 5.3e-13 80.1 122 43.4
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.6e-12 77.8 85 47.1
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 3.4e-12 77.4 84 45.2
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 7.6e-12 76.3 82 47.6
Rhsim01G0085700 Rhododendron simsii HOM05D010265 ORTHO05D009356 7.6e-12 76.3 164 35.4
vmacro05509 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 7.6e-12 76.3 304 26.0
CSS0000959 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.2e-11 74.7 66 53.0
Actinidia11796 Actinidia chinensis HOM05D002604 ORTHO05D009356 4.9e-11 73.6 78 39.7
RhsimUnG0176300 Rhododendron simsii HOM05D000026 ORTHO05D000127 6.4e-11 73.2 194 32.5
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 8.4e-11 72.8 168 33.9
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.4e-11 72.8 67 41.8
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 1.1e-10 72.4 80 42.5
CSS0042344 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.4e-10 72.0 79 49.4
CSS0047841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.9e-10 71.6 180 27.2
Sc09g0002060 Simmondsia chinensis HOM05D009348 ORTHO05D010856 4.2e-10 70.5 230 25.7
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 4.2e-10 70.5 195 29.7
CSS0025679 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 5.4e-10 70.1 102 39.2
Rhsim02G0131300 Rhododendron simsii HOM05D029833 ORTHO05D009356 5.4e-10 70.1 272 23.9
Rhsim03G0015400 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.4e-10 70.1 84 42.9
CSS0017101 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 7.1e-10 69.7 74 47.3
Sc02g0004050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.2e-09 68.9 108 36.1
Rhsim07G0052100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.6e-09 68.6 68 42.6
Lj4g0013144 Lotus japonicus HOM05D008220 ORTHO05D010358 3.5e-09 67.4 218 25.2
Sc07g0006130 Simmondsia chinensis HOM05D009209 ORTHO05D009629 6.0e-09 66.6 85 37.6
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 7.8e-09 66.2 78 38.5
vmacro11329 Vaccinium macrocarpon HOM05D010265 ORTHO05D051532 1.3e-08 65.5 178 30.3
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.3e-08 64.7 79 38.0
CSS0001491 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 3.0e-08 64.3 184 26.1
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 3.9e-08 63.9 252 26.2
Rhsim04G0141400 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.9e-08 63.9 88 39.8
Rhsim11G0140400 Rhododendron simsii HOM05D000026 ORTHO05D009356 3.9e-08 63.9 88 39.8
Sc24g0004230 Simmondsia chinensis HOM05D009348 ORTHO05D010856 3.9e-08 63.9 80 40.0
Rhsim01G0127900 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.1e-08 63.5 63 49.2
RhsimUnG0151500 Rhododendron simsii HOM05D017214 ORTHO05D018100 5.1e-08 63.5 176 31.8
CSS0020841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 6.6e-08 63.2 194 26.3
Rhsim02G0133000 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.7e-08 62.8 73 45.2
Rhsim09G0015100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-07 62.4 329 24.9
Sc23g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-07 62.4 214 25.2
Ah.05g171570 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.5e-07 62.0 85 40.0
Lsat_1_v5_gn_5_131521 Lactuca sativa HOM05D003915 ORTHO05D001516 1.5e-07 62.0 228 22.4
vmacro09252 Vaccinium macrocarpon HOM05D008219 ORTHO05D000487 1.5e-07 62.0 171 25.7
vmacro10949 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.9e-07 61.6 70 38.6
Actinidia21603 Actinidia chinensis HOM05D008219 ORTHO05D030892 2.5e-07 61.2 72 38.9
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.5e-07 61.2 94 37.2
Rhsim12G0081100 Rhododendron simsii HOM05D010265 ORTHO05D009356 2.5e-07 61.2 61 57.4
RhsimUnG0075300 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.5e-07 61.2 114 39.5
Ah.16g108500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 5.6e-07 60.1 109 34.9
CSS0047350 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 5.6e-07 60.1 64 43.8
Sc18g0000360 Simmondsia chinensis HOM05D009348 ORTHO05D030613 5.6e-07 60.1 87 37.9
Ah.07g198450 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.3e-07 59.7 83 41.0
Rhsim04G0090900 Rhododendron simsii HOM05D008219 ORTHO05D009356 7.3e-07 59.7 88 38.6
vmacro05076 Vaccinium macrocarpon HOM05D002132 ORTHO05D002168 7.3e-07 59.7 246 25.2
Actinidia15202 Actinidia chinensis HOM05D012898 ORTHO05D009356 9.6e-07 59.3 162 31.5
Ah.14g081710 Amaranthus hybridus HOM05D008762 ORTHO05D011252 9.6e-07 59.3 81 38.3
Sc03g0005750 Simmondsia chinensis HOM05D009348 ORTHO05D011705 9.6e-07 59.3 89 32.6
Zm00001eb107930 Zea mays HOM05D000285 ORTHO05D000241 9.6e-07 59.3 115 33.0
Zm00001eb325800 Zea mays HOM05D000285 ORTHO05D000241 9.6e-07 59.3 115 33.0
RhsimUnG0085900 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-06 58.9 174 33.3
RhsimUnG0239600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-06 58.9 91 35.2
Sc10g0004010 Simmondsia chinensis HOM05D031748 ORTHO05D011057 1.3e-06 58.9 62 45.2
Zm00001eb116460 Zea mays HOM05D000285 ORTHO05D000241 1.3e-06 58.9 119 33.6
Zm00001eb302640 Zea mays HOM05D000285 ORTHO05D000241 1.3e-06 58.9 119 33.6
Os07g0584500 Oryza sativa ssp. japonica HOM05D000285 ORTHO05D000241 1.6e-06 58.5 118 32.2
Rhsim05G0211700 Rhododendron simsii HOM05D010265 ORTHO05D009356 1.6e-06 58.5 139 36.0
Sc17g0002240 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.6e-06 58.5 80 37.5
Lj5g0015440 Lotus japonicus HOM05D008220 ORTHO05D010358 2.1e-06 58.2 223 23.8
Rhsim01G0047800 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.8e-06 57.8 121 30.6
RhsimUnG0053300 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.8e-06 57.8 129 36.4
vmacro14260 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 2.8e-06 57.8 322 23.9
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 2.8e-06 57.8 72 37.5
Ah.10g026690 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.6e-06 57.4 82 31.7
LjContig00357g0023212 Lotus japonicus HOM05D002777 ORTHO05D001516 3.6e-06 57.4 227 21.6
Sc15g0003590 Simmondsia chinensis HOM05D009209 ORTHO05D011057 3.6e-06 57.4 79 32.9
Sc02g0003510 Simmondsia chinensis HOM05D009348 ORTHO05D010856 4.8e-06 57.0 84 35.7
Hma1.2p1_0657F.1_g197000 Hydrangea macrophylla HOM05D000285 ORTHO05D000241 6.2e-06 56.6 105 32.4
Rhsim09G0050400 Rhododendron simsii HOM05D017214 ORTHO05D018100 6.2e-06 56.6 200 28.0
Sc22g0001820 Simmondsia chinensis HOM05D009348 ORTHO05D010856 6.2e-06 56.6 166 24.7
Zm00001eb302580 Zea mays HOM05D000285 ORTHO05D000241 6.2e-06 56.6 119 31.9
Rhsim08G0017800 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.1e-06 56.2 165 29.7


User provided reference genes

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