Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11522 Vaccinium macrocarpon HOM05D005847 ORTHO05D007143 3.5e-294 1014.2 518 100.0
Actinidia22190 Actinidia chinensis HOM05D005847 ORTHO05D007143 6.8e-205 717.6 559 68.2
Lj2A159T44 Lonicera japonica HOM05D005847 ORTHO05D007143 4.6e-201 704.9 552 68.5
GSVIVG01019613001 Vitis vinifera HOM05D005847 ORTHO05D007143 3.6e-190 668.7 555 65.8
Nn8g41240 Nelumbo nucifera HOM05D005847 ORTHO05D007143 5.8e-188 661.4 554 62.8
TAR629G2252 Trochodendron aralioides HOM05D005847 ORTHO05D007143 1.3e-187 660.2 554 64.1
Peaxi162Scf00074g00363 Petunia axillaris HOM05D005847 ORTHO05D007143 3.8e-187 658.7 553 63.3
Sopen08g031110 Solanum pennellii HOM05D005847 ORTHO05D007143 8.4e-187 657.5 553 62.4
Cc08_g16520 Coffea canephora HOM05D005847 ORTHO05D007143 3.2e-186 655.6 562 61.7
Solyc08g082880.4 Solanum lycopersicum HOM05D005847 ORTHO05D007143 7.1e-186 654.4 553 62.2
QL10p008953 Quercus lobata HOM05D005847 ORTHO05D007143 1.3e-184 650.2 559 64.2
CAN.G567.67 Capsicum annuum HOM05D005847 ORTHO05D007143 2.6e-180 636.0 553 61.3
Manes.01G053800 Manihot esculenta HOM05D005847 ORTHO05D007143 1.7e-179 633.3 556 61.7
MBI12_g02092_MAGBIO Magnolia biondii HOM05D005847 ORTHO05D007143 3.8e-179 632.1 560 60.0
Cfa011951 Carpinus fangiana HOM05D005847 ORTHO05D007143 6.4e-179 631.3 560 64.1
PGSC0003DMG400012250 Solanum tuberosum HOM05D005847 ORTHO05D007143 1.4e-178 630.2 562 60.1
PGR042G1950 Punica granatum HOM05D005847 ORTHO05D007143 2.4e-178 629.4 556 63.7
Haze_09129 Corylus avellana HOM05D005847 ORTHO05D007143 7.1e-178 627.9 562 64.2
Gohir.D12G239600 Gossypium hirsutum HOM05D005847 ORTHO05D007143 9.3e-178 627.5 555 61.3
Gorai.008G256700 Gossypium raimondii HOM05D005847 ORTHO05D007143 2.1e-177 626.3 555 61.1
Potri.001G086800 Populus trichocarpa HOM05D005847 ORTHO05D007143 2.1e-177 626.3 557 62.8
Duzib084G0923 Durio zibethinus HOM05D005847 ORTHO05D007143 2.7e-177 625.9 555 63.2
Eucgr.E01030 Eucalyptus grandis HOM05D005847 ORTHO05D007143 5.1e-176 621.7 556 60.3
Ciclev10019764m.g Citrus clementina HOM05D005847 ORTHO05D007143 2.5e-175 619.4 562 60.1
Gohir.A12G238500 Gossypium hirsutum HOM05D005847 ORTHO05D007143 2.5e-175 619.4 555 60.5
Thecc.03G224700 Theobroma cacao HOM05D005847 ORTHO05D007143 3.3e-175 619.0 559 62.1
TWI81G0154 Tripterygium wilfordii HOM05D005847 ORTHO05D007143 4.3e-175 618.6 555 62.2
DCAR_006499 Daucus carota HOM05D005847 ORTHO05D007143 5.6e-175 618.2 553 61.1
CsaV3_5G001820 Cucumis sativus L. HOM05D005847 ORTHO05D007143 7.3e-175 617.8 557 59.4
MD06G1113800 Malus domestica HOM05D005847 ORTHO05D007143 4.8e-174 615.1 555 58.7
Atru.chr9.1922 Acer truncatum HOM05D005847 ORTHO05D007143 6.2e-174 614.8 561 59.9
EL10Ac5g12470 Beta vulgaris HOM05D005847 ORTHO05D007143 1.4e-173 613.6 555 58.4
CiPaw.11G115200 Carya illinoinensis HOM05D005847 ORTHO05D007143 3.1e-173 612.5 569 61.7
ClCG01G001660 Citrullus lanatus HOM05D005847 ORTHO05D007143 5.3e-173 611.7 584 57.7
MD14G1134800 Malus domestica HOM05D005847 ORTHO05D007143 5.3e-173 611.7 555 58.6
VMungo1127G1163 Vigna mungo HOM05D005847 ORTHO05D007143 2.0e-172 609.8 567 58.6
Prupe.5G126500 Prunus persica HOM05D005847 ORTHO05D007143 3.4e-172 609.0 555 58.0
RcHm_v2.0_Chr2g0164461 Rosa chinensis HOM05D005847 ORTHO05D007143 1.7e-171 606.7 558 59.0
Sc01g0010500 Simmondsia chinensis HOM05D005847 ORTHO05D007143 2.2e-171 606.3 555 58.7
MELO3C005771.2 Cucumis melo HOM05D005847 ORTHO05D007143 2.9e-171 605.9 557 58.5
Aqoxy3G00691 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 8.4e-171 604.4 570 58.2
Ca_24013_v3 Cicer arietinum L. HOM05D005847 ORTHO05D007143 8.4e-171 604.4 558 60.9
Psat4g194080 Pisum sativum HOM05D005847 ORTHO05D007143 1.4e-170 603.6 542 59.6
Sed0023920 Sechium edule HOM05D005847 ORTHO05D007143 1.9e-170 603.2 556 58.5
HanXRQChr13g0415001 Helianthus annuus HOM05D005847 ORTHO05D007143 4.2e-170 602.1 556 57.9
FAN08G0147 Fragaria x ananassa HOM05D005847 ORTHO05D007143 7.1e-170 601.3 557 58.5
Phvul.011G200000 Phaseolus vulgaris HOM05D005847 ORTHO05D007143 2.1e-169 599.7 567 57.8
FAN13G1107 Fragaria x ananassa HOM05D005847 ORTHO05D007143 3.5e-169 599.0 557 59.1
TPR.G8535 Trifolium pratense HOM05D005847 ORTHO05D007143 3.0e-168 595.9 538 61.2
Aqoxy5G04298 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 3.9e-168 595.5 569 56.8
CANSAT21G1860 Cannabis sativa HOM05D005847 ORTHO05D007143 3.9e-168 595.5 563 58.8
Lalb_Chr13g0298981 Lupinus albus HOM05D005847 ORTHO05D007143 3.9e-168 595.5 550 60.5
FvH4_5g11440 Fragaria vesca HOM05D005847 ORTHO05D007143 8.7e-168 594.3 557 58.5
FAN04G0204 Fragaria x ananassa HOM05D005847 ORTHO05D007143 4.3e-167 592.0 557 58.5
FAN18G1068 Fragaria x ananassa HOM05D005847 ORTHO05D007143 1.3e-166 590.5 557 57.8
Hund18289 Selenicereus undatus HOM05D005847 ORTHO05D007143 1.5e-164 583.6 555 56.0
Glyma.13G191700 Glycine max HOM05D005847 ORTHO05D007143 4.5e-164 582.0 573 56.4
Medtr8g040700 Medicago truncatula HOM05D005847 ORTHO05D007143 4.5e-164 582.0 543 57.6
COL.COLO4_10763 Corchorus olitorius HOM05D005847 ORTHO05D007143 1.3e-163 580.5 555 57.7
Os07g0297300 Oryza sativa ssp. japonica HOM05D005847 ORTHO05D007143 7.1e-162 574.7 565 54.9
CSS0040838 Camellia sinensis var. sinensis HOM05D005847 ORTHO05D007143 2.7e-161 572.8 442 69.9
THA.LOC104809314 Tarenaya hassleriana HOM05D005847 ORTHO05D007143 1.3e-160 570.5 543 56.5
Migut.E00656 Erythranthe guttata HOM05D005847 ORTHO05D007143 1.8e-160 570.1 576 56.1
ECA240G1801 Erigeron canadensis HOM05D005847 ORTHO05D007143 3.0e-160 569.3 586 53.4
Zm00001eb021260 Zea mays HOM05D005847 ORTHO05D007143 5.3e-157 558.5 566 53.5
arahy.Tifrunner.gnm1.ann1.PR6ST2 Arachis hypogaea HOM05D005847 ORTHO05D007143 4.5e-156 555.4 478 62.1
Sabra01G0063100 Salix brachista HOM05D005847 ORTHO05D007143 2.9e-155 552.7 556 57.6
ATR0757G021 Amborella trichopoda HOM05D005847 ORTHO05D007143 4.2e-154 548.9 548 55.5
arahy.Tifrunner.gnm1.ann1.HI9AVU Arachis hypogaea HOM05D005847 ORTHO05D007143 7.1e-154 548.1 471 61.6
Lj1g0001744 Lotus japonicus HOM05D005847 ORTHO05D007143 2.3e-152 543.1 645 50.2
SGA_v2.0_scaffold159G37696 Striga asiatica HOM05D005847 ORTHO05D007143 9.6e-151 537.7 551 53.9
Rhsim02G0249100 Rhododendron simsii HOM05D005847 ORTHO05D007143 2.8e-150 536.2 600 53.5
Aa31LG2G1600 Aethionema arabicum HOM05D005847 ORTHO05D007143 2.4e-149 533.1 562 54.6
AL2G10160 Arabidopsis lyrata HOM05D005847 ORTHO05D007143 1.0e-147 527.7 547 54.7
HPP92_003273 Vanilla planifolia HOM05D005847 ORTHO05D007143 1.3e-147 527.3 561 52.0
PSO017G1852 Papaver somniferum HOM05D005847 ORTHO05D007143 1.7e-147 526.9 587 51.1
AT1G64600 Arabidopsis thaliana HOM05D005847 ORTHO05D007143 8.5e-147 524.6 545 54.7
AUR62007027 Chenopodium quinoa HOM05D005847 ORTHO05D007143 1.6e-145 520.4 549 53.4
Sp2g00130 Schrenkiella parvula HOM05D005847 ORTHO05D007143 3.6e-145 519.2 553 54.2
Carub.0002s0014 Capsella rubella HOM05D005847 ORTHO05D007143 3.0e-144 516.2 560 53.4
BcaB07g31478 Brassica carinata HOM05D005847 ORTHO05D007143 4.1e-141 505.8 560 52.3
Thhalv10023366m.g Eutrema salsugineum HOM05D005847 ORTHO05D007143 2.0e-140 503.4 599 49.7
BraA09t37102Z Brassica rapa HOM05D005847 ORTHO05D007143 2.6e-140 503.1 553 52.6
BcaC04g22588 Brassica carinata HOM05D005847 ORTHO05D007143 3.4e-140 502.7 553 52.4
C09p17640 Brassica napus HOM05D005847 ORTHO05D007143 3.4e-140 502.7 553 52.4
BolC9t54656H Brassica oleracea HOM05D005847 ORTHO05D007143 3.4e-140 502.7 553 52.4
A09p14540 Brassica napus HOM05D005847 ORTHO05D007143 1.0e-139 501.1 553 52.4
unitig_21.g20386 Utricularia gibba HOM05D005847 ORTHO05D007143 1.9e-138 496.9 550 50.5
Nitab4.5_0002728g0010 Nicotiana tabacum HOM05D005847 ORTHO05D007143 2.9e-131 473.0 379 65.7
Lsat_1_v5_gn_6_83620 Lactuca sativa HOM05D005847 ORTHO05D007143 9.7e-127 458.0 379 63.6
AUR62019890 Chenopodium quinoa HOM05D005847 ORTHO05D007143 1.2e-124 451.1 454 55.3
Oeu058016.1 Olea europaea HOM05D005847 ORTHO05D007143 5.5e-114 415.6 553 48.3
Nitab4.5_0006880g0020 Nicotiana tabacum HOM05D005847 ORTHO05D007143 1.2e-103 381.3 513 48.0
RcHm_v2.0_Chr7g0186411 Rosa chinensis HOM05D005847 ORTHO05D007143 1.3e-94 351.3 314 59.6
Mapoly0031s0174 Marchantia polymorpha HOM05D005847 ORTHO05D007143 6.2e-89 332.4 488 40.4
Nitab4.5_0002027g0040 Nicotiana tabacum HOM05D005847 ORTHO05D007143 1.1e-88 331.6 538 41.3
Pp3c9_6890 Physcomitrium patens HOM05D005847 ORTHO05D007143 8.9e-88 328.6 453 42.2
Ah.12g052990 Amaranthus hybridus HOM05D005847 ORTHO05D007143 2.2e-86 323.9 589 36.5
MSTRG.26906 Avicennia marina HOM05D005847 ORTHO05D007143 4.1e-85 319.7 293 59.7
MSTRG.15574 Avicennia marina HOM05D005847 ORTHO05D007143 4.3e-82 309.7 266 60.5
CDE04G1283 Ceratophyllum demersum HOM05D005847 ORTHO05D007143 1.2e-76 291.6 294 54.1
SMO119G0297 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 5.4e-69 266.2 589 32.4
QL10p010267 Quercus lobata HOM05D005847 ORTHO05D007143 3.5e-68 263.5 213 66.2
RcHm_v2.0_Chr7g0186431 Rosa chinensis HOM05D005847 ORTHO05D007143 6.0e-68 262.7 244 59.8
SHI06935 Sapria himalayana HOM05D005847 ORTHO05D007143 1.8e-64 251.1 503 37.2
CARHR046320 Cardamine hirsuta HOM05D005847 ORTHO05D007143 5.8e-55 219.5 242 52.9
Cpa.g.sc15.20 Carica papaya HOM05D005847 ORTHO05D007143 9.9e-55 218.8 177 63.8
Nn1g00324 Nelumbo nucifera HOM05D005847 ORTHO05D007143 4.6e-52 209.9 246 50.8
SMO115G0010 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 1.3e-51 208.4 272 37.9
Aqoxy5G04303 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 6.2e-49 199.5 191 57.6
Cpa.g.c33268 Carica papaya HOM05D005847 ORTHO05D007143 1.4e-48 198.4 148 63.5
SMO116G0437 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 6.0e-44 183.0 463 28.7
SEGI_09534 Sequoiadendron giganteum HOM05D005847 ORTHO05D007143 1.0e-43 182.2 179 55.3
AagrBONN_evm.TU.Sc2ySwM_228.3279 Anthoceros agrestis HOM05D005847 ORTHO05D007143 2.3e-43 181.0 287 38.7
RcHm_v2.0_Chr7g0205571 Rosa chinensis HOM05D005847 ORTHO05D007143 2.5e-42 177.6 287 40.4
CBR_g978 Chara braunii HOM05D005847 ORTHO05D007143 1.0e-35 155.6 364 31.3
RcHm_v2.0_Chr7g0205551 Rosa chinensis HOM05D005847 ORTHO05D007143 5.3e-32 143.3 297 36.0
AUR62019891 Chenopodium quinoa HOM05D005847 ORTHO05D007143 6.5e-30 136.3 119 58.8
Cpa.g.sc15.22 Carica papaya HOM05D005847 ORTHO05D007143 2.5e-29 134.4 82 76.8
CDE04G2319 Ceratophyllum demersum HOM05D005847 ORTHO05D007143 2.5e-29 134.4 160 48.1
Atru.chr1.1468 Acer truncatum HOM05D005847 ORTHO05D007143 5.7e-26 123.2 108 56.5
Nn1g00325 Nelumbo nucifera HOM05D005847 ORTHO05D007143 2.2e-25 121.3 96 64.6
MCO09G139 Micromonas commoda HOM05D005847 ORTHO05D007143 1.1e-24 119.0 543 25.0
Cre05.g237600 Chlamydomonas reinhardtii HOM05D005847 ORTHO05D007143 3.0e-19 100.9 124 45.2
Lj3g0011757 Lotus japonicus HOM05D005847 ORTHO05D007143 2.2e-14 84.7 148 38.5
Os10g0520950 Oryza sativa ssp. japonica HOM05D005847 ORTHO05D007143 3.8e-14 84.0 121 40.5
Medtr8g040720 Medicago truncatula HOM05D005847 ORTHO05D007143 1.9e-13 81.6 52 59.6
QL02p028460 Quercus lobata HOM05D005847 ORTHO05D007143 5.5e-13 80.1 166 35.5
Sabra03G0104700 Salix brachista HOM05D005847 ORTHO05D007143 9.7e-10 69.3 99 40.4
QL02p028464 Quercus lobata HOM05D005847 ORTHO05D007143 1.2e-07 62.4 87 41.4
Nitab4.5_0000109g0320 Nicotiana tabacum HOM05D005847 ORTHO05D007143 4.5e-07 60.5 70 52.9


User provided reference genes

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