Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11517 Vaccinium macrocarpon HOM05D002505 ORTHO05D007115 2.2e-274 948.3 479 100.0
Haze_09143 Corylus avellana HOM05D002505 ORTHO05D007115 1.7e-165 586.6 479 63.7
Cfa011943 Carpinus fangiana HOM05D002505 ORTHO05D007115 4.6e-163 578.6 479 63.3
GSVIVG01019628001 Vitis vinifera HOM05D002505 ORTHO05D007115 1.1e-161 573.9 479 62.2
CSS0047752 Camellia sinensis var. sinensis HOM05D002505 ORTHO05D007115 8.1e-160 567.8 479 63.0
QL02p027659 Quercus lobata HOM05D002505 ORTHO05D007115 5.8e-158 561.6 479 61.8
TAR375G0040 Trochodendron aralioides HOM05D002505 ORTHO05D007115 5.8e-158 561.6 481 60.9
Dinv11454 Davidia involucrata HOM05D002505 ORTHO05D007115 1.4e-156 557.0 477 62.7
Lj2A158G82 Lonicera japonica HOM05D002505 ORTHO05D007115 3.2e-156 555.8 478 61.9
Prupe.5G127300 Prunus persica HOM05D002505 ORTHO05D007115 3.2e-156 555.8 479 60.8
CiPaw.11G114300 Carya illinoinensis HOM05D002505 ORTHO05D007115 7.8e-155 551.2 477 60.2
Nitab4.5_0002728g0050 Nicotiana tabacum HOM05D002505 ORTHO05D007115 1.0e-154 550.8 479 60.8
TWI60G0007 Tripterygium wilfordii HOM05D002505 ORTHO05D007115 2.3e-154 549.7 479 59.5
FAN17G1638 Fragaria x ananassa HOM05D002505 ORTHO05D007115 2.5e-153 546.2 480 60.8
Ca_12555_v3 Cicer arietinum L. HOM05D002505 ORTHO05D007115 7.3e-153 544.7 479 60.5
Dinv37391 Davidia involucrata HOM05D002505 ORTHO05D007115 9.5e-153 544.3 449 64.6
FAN07G1120 Fragaria x ananassa HOM05D002505 ORTHO05D007115 9.5e-153 544.3 480 60.6
Actinidia22196 Actinidia chinensis HOM05D002505 ORTHO05D007115 1.6e-152 543.5 484 63.0
Duzib205G1766 Durio zibethinus HOM05D002505 ORTHO05D007115 4.7e-152 542.0 477 58.5
FvH4_4g16080 Fragaria vesca HOM05D002505 ORTHO05D007115 1.1e-151 540.8 480 60.4
FAN12G2820 Fragaria x ananassa HOM05D002505 ORTHO05D007115 1.1e-151 540.8 480 60.4
Gohir.A12G238900 Gossypium hirsutum HOM05D002505 ORTHO05D007115 3.1e-151 539.3 477 58.7
Sopen08g031180 Solanum pennellii HOM05D002505 ORTHO05D007115 3.1e-151 539.3 479 59.7
FAN22G1998 Fragaria x ananassa HOM05D002505 ORTHO05D007115 5.2e-151 538.5 480 60.2
Solyc08g082960.3 Solanum lycopersicum HOM05D002505 ORTHO05D007115 5.2e-151 538.5 479 59.9
TPR.G36929 Trifolium pratense HOM05D002505 ORTHO05D007115 8.9e-151 537.7 479 59.7
Thecc.03G223700 Theobroma cacao HOM05D002505 ORTHO05D007115 3.4e-150 535.8 477 58.7
Gohir.D12G240000 Gossypium hirsutum HOM05D002505 ORTHO05D007115 4.4e-150 535.4 477 58.5
Nitab4.5_0005042g0030 Nicotiana tabacum HOM05D002505 ORTHO05D007115 4.9e-149 531.9 460 59.8
LjContig00141g0018407 Lotus japonicus HOM05D002505 ORTHO05D007115 6.4e-149 531.6 478 59.2
Gorai.008G257100 Gossypium raimondii HOM05D002505 ORTHO05D007115 1.1e-148 530.8 477 58.1
CANSAT21G2418 Cannabis sativa HOM05D002505 ORTHO05D007115 3.2e-148 529.3 479 58.5
Oeu010746.1 Olea europaea HOM05D002505 ORTHO05D007115 9.2e-148 527.7 477 59.1
Lalb_Chr17g0338531 Lupinus albus HOM05D002505 ORTHO05D007115 1.6e-147 526.9 479 59.5
Ca_12566_v3 Cicer arietinum L. HOM05D002505 ORTHO05D007115 2.1e-147 526.6 452 61.1
Manes.02G004600 Manihot esculenta HOM05D002505 ORTHO05D007115 1.5e-145 520.4 479 58.9
HanXRQChr02g0047181 Helianthus annuus HOM05D002505 ORTHO05D007115 1.9e-145 520.0 478 57.1
Psat6g045400 Pisum sativum HOM05D002505 ORTHO05D007115 4.3e-145 518.8 479 58.2
RcHm_v2.0_Chr7g0186571 Rosa chinensis HOM05D002505 ORTHO05D007115 7.3e-145 518.1 480 58.1
Peaxi162Scf00074g00358 Petunia axillaris HOM05D002505 ORTHO05D007115 2.1e-144 516.5 451 60.3
Potri.003G145100 Populus trichocarpa HOM05D002505 ORTHO05D007115 4.7e-144 515.4 477 56.6
Medtr1g032200 Medicago truncatula HOM05D002505 ORTHO05D007115 1.8e-143 513.5 479 58.7
MD06G1114600 Malus domestica HOM05D002505 ORTHO05D007115 2.4e-143 513.1 481 56.1
Glyma.06G132900 Glycine max HOM05D002505 ORTHO05D007115 3.1e-143 512.7 477 58.1
Medtr5g025880 Medicago truncatula HOM05D002505 ORTHO05D007115 1.7e-141 506.9 469 57.6
Aqoxy5G02423 Aquilegia oxysepala HOM05D002505 ORTHO05D007115 2.2e-141 506.5 477 55.6
Glyma.04G232000 Glycine max HOM05D002505 ORTHO05D007115 2.2e-141 506.5 476 58.0
arahy.Tifrunner.gnm1.ann1.Y3P1ER Arachis hypogaea HOM05D002505 ORTHO05D007115 2.4e-140 503.1 477 56.4
Eucgr.D01694 Eucalyptus grandis HOM05D002505 ORTHO05D007115 3.2e-140 502.7 475 56.4
VMungo1309G3079 Vigna mungo HOM05D002505 ORTHO05D007115 3.2e-140 502.7 477 58.1
Cc00_g23270 Coffea canephora HOM05D002505 ORTHO05D007115 5.4e-140 501.9 481 56.3
arahy.Tifrunner.gnm1.ann1.31YZJ9 Arachis hypogaea HOM05D002505 ORTHO05D007115 9.3e-140 501.1 477 56.4
Aqoxy5G01632 Aquilegia oxysepala HOM05D002505 ORTHO05D007115 6.0e-139 498.4 477 55.1
Cpa.g.sc175.6 Carica papaya HOM05D002505 ORTHO05D007115 6.0e-139 498.4 452 58.2
Lalb_Chr10g0095811 Lupinus albus HOM05D002505 ORTHO05D007115 7.8e-139 498.0 482 56.4
Migut.J00879 Erythranthe guttata HOM05D002505 ORTHO05D007115 1.3e-138 497.3 480 54.8
SalBow6G5481 Salvia bowleyana HOM05D002505 ORTHO05D007115 1.7e-138 496.9 478 54.6
MSTRG.2011 Avicennia marina HOM05D002505 ORTHO05D007115 8.7e-138 494.6 467 55.5
AUR62007033 Chenopodium quinoa HOM05D002505 ORTHO05D007115 3.3e-137 492.7 480 54.8
Phvul.009G039500 Phaseolus vulgaris HOM05D002505 ORTHO05D007115 3.3e-137 492.7 469 57.6
AUR62019897 Chenopodium quinoa HOM05D002505 ORTHO05D007115 7.3e-137 491.5 479 55.5
Ciclev10020379m.g Citrus clementina HOM05D002505 ORTHO05D007115 2.1e-136 490.0 479 55.1
DCAR_009648 Daucus carota HOM05D002505 ORTHO05D007115 2.1e-136 490.0 454 55.7
Sed0001422 Sechium edule HOM05D002505 ORTHO05D007115 1.8e-135 486.9 480 55.6
CsaV3_5G036540 Cucumis sativus L. HOM05D002505 ORTHO05D007115 1.5e-134 483.8 478 56.1
MBI04_g06931_MAGBIO Magnolia biondii HOM05D002505 ORTHO05D007115 4.4e-134 482.3 479 54.1
PSO339G4385 Papaver somniferum HOM05D002505 ORTHO05D007115 1.1e-132 477.6 482 52.7
ClCG05G020760 Citrullus lanatus HOM05D002505 ORTHO05D007115 9.3e-132 474.6 480 54.6
SGA_v2.0_scaffold104G30125 Striga asiatica HOM05D002505 ORTHO05D007115 3.9e-130 469.2 478 52.1
Lsat_1_v5_gn_6_9040 Lactuca sativa HOM05D002505 ORTHO05D007115 8.7e-130 468.0 480 53.3
Sabra01G0062100 Salix brachista HOM05D002505 ORTHO05D007115 8.1e-128 461.5 477 53.5
COL.COLO4_10772 Corchorus olitorius HOM05D002505 ORTHO05D007115 2.4e-127 459.9 419 57.8
PSO384G5034 Papaver somniferum HOM05D002505 ORTHO05D007115 2.4e-127 459.9 483 51.3
Dinv25607 Davidia involucrata HOM05D002505 ORTHO05D007115 5.3e-127 458.8 417 60.0
unitig_22.g5105 Utricularia gibba HOM05D002505 ORTHO05D007115 5.3e-127 458.8 470 52.3
PSO017G1033 Papaver somniferum HOM05D002505 ORTHO05D007115 9.9e-126 454.5 452 53.3
CDE11G0043 Ceratophyllum demersum HOM05D002505 ORTHO05D007115 1.2e-123 447.6 483 49.7
Nn4g26685 Nelumbo nucifera HOM05D002505 ORTHO05D007115 2.7e-123 446.4 411 58.2
PGSC0003DMG400012246 Solanum tuberosum HOM05D002505 ORTHO05D007115 9.6e-121 438.0 411 57.2
PGR031G3103 Punica granatum HOM05D002505 ORTHO05D007115 2.8e-120 436.4 429 55.5
Os10g0520700 Oryza sativa ssp. japonica HOM05D002505 ORTHO05D007115 1.8e-119 433.7 460 50.4
Aa31LG1G18070 Aethionema arabicum HOM05D002505 ORTHO05D007115 2.4e-119 433.3 483 48.7
CAN.G567.73 Capsicum annuum HOM05D002505 ORTHO05D007115 3.1e-119 433.0 418 56.0
THA.LOC104823623 Tarenaya hassleriana HOM05D002505 ORTHO05D007115 2.2e-117 426.8 457 50.3
Glyma.13G121900 Glycine max HOM05D002505 ORTHO05D007115 3.2e-116 422.9 416 55.0
MELO3C012450.2 Cucumis melo HOM05D002505 ORTHO05D007115 1.6e-115 420.6 439 53.8
HPP92_022360 Vanilla planifolia HOM05D002505 ORTHO05D007115 1.0e-114 417.9 462 49.4
HPP92_022335 Vanilla planifolia HOM05D002505 ORTHO05D007115 2.3e-114 416.8 457 49.2
Zm00001eb021220 Zea mays HOM05D002505 ORTHO05D007115 3.0e-114 416.4 475 46.9
Sp2g26890 Schrenkiella parvula HOM05D002505 ORTHO05D007115 5.7e-113 412.1 483 48.4
ATR0757G152 Amborella trichopoda HOM05D002505 ORTHO05D007115 9.6e-113 411.4 458 50.9
EL10Ac5g12461 Beta vulgaris HOM05D002505 ORTHO05D007115 1.3e-112 411.0 426 50.0
SEGI_04382 Sequoiadendron giganteum HOM05D002505 ORTHO05D007115 8.2e-112 408.3 491 46.0
ECA240G2126 Erigeron canadensis HOM05D002505 ORTHO05D007115 1.4e-111 407.5 418 52.9
A06p30440 Brassica napus HOM05D002505 ORTHO05D007115 1.8e-111 407.1 478 47.3
C03p62620 Brassica napus HOM05D002505 ORTHO05D007115 4.1e-111 406.0 478 47.7
CARHR277730 Cardamine hirsuta HOM05D002505 ORTHO05D007115 6.9e-111 405.2 487 48.0
BolC3t18519H Brassica oleracea HOM05D002505 ORTHO05D007115 9.0e-111 404.8 478 47.5
BraA06t25993Z Brassica rapa HOM05D002505 ORTHO05D007115 4.5e-110 402.5 478 46.7
AT5G63830 Arabidopsis thaliana HOM05D002505 ORTHO05D007115 1.0e-109 401.4 485 47.8
vmacro04587 Vaccinium macrocarpon HOM05D002505 ORTHO05D007115 1.9e-108 397.1 419 58.9
BcaC01g02620 Brassica carinata HOM05D002505 ORTHO05D007115 3.2e-108 396.4 456 48.5
Thhalv10004334m.g Eutrema salsugineum HOM05D002505 ORTHO05D007115 6.7e-106 388.7 484 46.5
Carub.0008s2460 Capsella rubella HOM05D002505 ORTHO05D007115 1.4e-103 380.9 484 45.7
AL8G41060 Arabidopsis lyrata HOM05D002505 ORTHO05D007115 1.2e-102 377.9 485 46.0
FAN08G0319 Fragaria x ananassa HOM05D002505 ORTHO05D007115 1.2e-102 377.9 366 57.4
RhsimUnG0115700 Rhododendron simsii HOM05D002505 ORTHO05D007115 7.4e-89 332.0 289 62.3
Sc22g0004750 Simmondsia chinensis HOM05D002505 ORTHO05D007115 2.2e-88 330.5 265 61.5
Pp3c16_17440 Physcomitrium patens HOM05D002505 ORTHO05D007115 1.6e-86 324.3 490 40.0
Hma1.2p1_0456F.1_g156510 Hydrangea macrophylla HOM05D002505 ORTHO05D007115 1.9e-84 317.4 216 72.2
Mapoly0049s0078 Marchantia polymorpha HOM05D002505 ORTHO05D007115 6.7e-82 308.9 515 35.3
SMO348G0019 Selaginella moellendorffii HOM05D002505 ORTHO05D007115 1.3e-80 304.7 428 39.5
SEGI_16855 Sequoiadendron giganteum HOM05D002505 ORTHO05D007115 3.6e-75 286.6 378 42.3
RcHm_v2.0_Chr7g0184121 Rosa chinensis HOM05D002505 ORTHO05D007115 2.4e-71 273.9 197 70.6
FAN13G3213 Fragaria x ananassa HOM05D002505 ORTHO05D007115 1.2e-70 271.6 191 71.2
AagrBONN_evm.TU.Sc2ySwM_368.1194 Anthoceros agrestis HOM05D002505 ORTHO05D007115 1.0e-66 258.5 414 40.8
Potri.001G085800 Populus trichocarpa HOM05D002505 ORTHO05D007115 3.7e-64 250.0 186 64.5
Medtr1g090530 Medicago truncatula HOM05D002505 ORTHO05D007115 9.2e-55 218.8 232 52.6
Atru.chr5.482 Acer truncatum HOM05D002505 ORTHO05D007115 1.0e-53 215.3 224 52.2
Rhsim10G0016900 Rhododendron simsii HOM05D000068 ORTHO05D004691 4.6e-46 189.9 201 54.2
Atru.chr5.483 Acer truncatum HOM05D002505 ORTHO05D007115 4.3e-44 183.3 141 66.0
MCO07G240 Micromonas commoda HOM05D002505 ORTHO05D007115 2.6e-41 174.1 457 29.3
Actinidia04163 Actinidia chinensis HOM05D002436 ORTHO05D002754 6.4e-40 169.5 166 56.0
FvH4_5g11280 Fragaria vesca HOM05D002505 ORTHO05D007115 6.0e-38 162.9 281 37.0
FAN05G1175 Fragaria x ananassa HOM05D002505 ORTHO05D007115 6.0e-38 162.9 113 71.7
CBR_g20449 Chara braunii HOM05D002505 ORTHO05D007115 1.0e-37 162.2 319 32.9
FAN14G3314 Fragaria x ananassa HOM05D002505 ORTHO05D007115 9.9e-33 145.6 136 57.4
Zm00001eb044440 Zea mays HOM05D002505 ORTHO05D007115 6.4e-32 142.9 218 40.8
Sc22g0004760 Simmondsia chinensis HOM05D002505 ORTHO05D007115 2.4e-31 141.0 94 71.3
SMO285G0002 Selaginella moellendorffii HOM05D002505 ORTHO05D007115 2.1e-30 137.9 282 32.3
Cre08.g379050 Chlamydomonas reinhardtii HOM05D002505 ORTHO05D007115 3.0e-29 134.0 607 24.5
RcHm_v2.0_Chr7g0184131 Rosa chinensis HOM05D002505 ORTHO05D007115 7.1e-23 112.8 71 71.8
Oeu004999.3 Olea europaea HOM05D002505 ORTHO05D007115 6.2e-19 99.8 135 43.7
CSS0027773 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 5.1e-13 80.1 51 76.5
FvH4_3g32050 Fragaria vesca HOM05D002505 ORTHO05D045879 8.7e-13 79.3 46 76.1
BraA06t26113Z Brassica rapa HOM05D005837 ORTHO05D007594 5.3e-10 70.1 114 42.1
HanXRQChr03g0061211 Helianthus annuus HOM05D002505 ORTHO05D007115 7.6e-09 66.2 80 42.5
MD05G1136200 Malus domestica HOM05D002505 ORTHO05D007115 4.6e-06 57.0 31 77.4


User provided reference genes

Program Settings