Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11510 Vaccinium macrocarpon HOM05D003990 ORTHO05D004925 3.2e-190 668.3 350 100.0
Rhsim02G0251300 Rhododendron simsii HOM05D003990 ORTHO05D004925 3.7e-114 415.6 365 69.6
Prupe.5G128500 Prunus persica HOM05D003990 ORTHO05D004925 1.1e-100 370.9 292 69.2
CSS0010282 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 1.8e-100 370.2 312 66.0
CSS0021441 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 6.8e-100 368.2 358 60.9
Dinv38683 Davidia involucrata HOM05D003990 ORTHO05D001284 2.6e-99 366.3 287 69.0
Oeu022039.1 Olea europaea HOM05D003990 ORTHO05D004925 7.6e-99 364.8 366 58.5
Sabra03G0105900 Salix brachista HOM05D003990 ORTHO05D004925 1.3e-98 364.0 323 62.2
Lsat_1_v5_gn_3_13681 Lactuca sativa HOM05D003990 ORTHO05D004925 6.4e-98 361.7 327 63.3
PGSC0003DMG400005851 Solanum tuberosum HOM05D003990 ORTHO05D004925 8.4e-98 361.3 353 59.8
Cfa011935 Carpinus fangiana HOM05D003990 ORTHO05D004925 1.1e-97 360.9 297 66.3
Solyc08g008530.1 Solanum lycopersicum HOM05D003990 ORTHO05D004925 1.4e-97 360.5 350 59.1
Potri.003G145700 Populus trichocarpa HOM05D003990 ORTHO05D004925 1.9e-97 360.1 345 59.1
Nitab4.5_0001962g0040 Nicotiana tabacum HOM05D003990 ORTHO05D004925 5.4e-97 358.6 324 63.9
Hma1.2p1_0212F.1_g090230 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 7.1e-97 358.2 405 54.3
MD06G1117400 Malus domestica HOM05D003990 ORTHO05D004925 7.1e-97 358.2 376 57.4
Nitab4.5_0000673g0130 Nicotiana tabacum HOM05D003990 ORTHO05D004925 1.2e-96 357.5 337 61.4
Peaxi162Scf00102g01878 Petunia axillaris HOM05D003990 ORTHO05D000951 1.6e-96 357.1 349 58.5
Cc08_g16660 Coffea canephora HOM05D003990 ORTHO05D004925 2.1e-96 356.7 356 59.0
Sopen08g004380 Solanum pennellii HOM05D003990 ORTHO05D004925 3.5e-96 355.9 348 58.9
HanXRQChr06g0166861 Helianthus annuus HOM05D003990 ORTHO05D004925 4.6e-96 355.5 338 59.2
Manes.11G125600 Manihot esculenta HOM05D003990 ORTHO05D004925 6.0e-96 355.1 307 63.8
Atru.chr9.1910 Acer truncatum HOM05D003990 ORTHO05D004925 3.0e-95 352.8 348 60.1
Sc01g0010590 Simmondsia chinensis HOM05D003990 ORTHO05D004925 3.0e-95 352.8 366 58.2
FAN13G1570 Fragaria x ananassa HOM05D003990 ORTHO05D004925 3.9e-95 352.4 362 57.5
TAR629G1984 Trochodendron aralioides HOM05D003990 ORTHO05D004925 5.1e-95 352.1 351 59.5
TWI60G1311 Tripterygium wilfordii HOM05D003990 ORTHO05D004925 6.6e-95 351.7 327 61.8
Aqoxy7G00029 Aquilegia oxysepala HOM05D003990 ORTHO05D004925 8.7e-95 351.3 375 57.3
Cpa.g.sc175.15 Carica papaya HOM05D003990 ORTHO05D004925 1.2e-93 347.4 350 58.9
RcHm_v2.0_Chr7g0186781 Rosa chinensis HOM05D003990 ORTHO05D004925 4.7e-93 345.5 373 57.4
Medtr1g031790 Medicago truncatula HOM05D003990 ORTHO05D004925 6.2e-93 345.1 369 56.6
Lalb_Chr17g0338551 Lupinus albus HOM05D003990 ORTHO05D004925 2.4e-92 343.2 308 62.0
CAN.G792.28 Capsicum annuum HOM05D003990 ORTHO05D004925 3.1e-92 342.8 326 60.7
Ciclev10020878m.g Citrus clementina HOM05D003990 ORTHO05D004925 6.9e-92 341.7 343 58.0
Carub.0006s2953 Capsella rubella HOM05D003990 ORTHO05D004925 9.0e-92 341.3 358 56.1
CiPaw.12G078400 Carya illinoinensis HOM05D003990 ORTHO05D004925 9.0e-92 341.3 294 62.2
Haze_14077 Corylus avellana HOM05D003990 ORTHO05D004925 3.4e-91 339.3 339 58.4
QL02p029212 Quercus lobata HOM05D003990 ORTHO05D004925 3.4e-91 339.3 289 63.0
ECA246G0738 Erigeron canadensis HOM05D003273 ORTHO05D004023 4.4e-91 339.0 291 61.5
Gohir.A02G097800 Gossypium hirsutum HOM05D003990 ORTHO05D004925 1.3e-90 337.4 330 58.8
DCAR_009092 Daucus carota HOM05D003990 ORTHO05D004925 2.2e-90 336.7 305 61.0
Lj2g0026928 Lotus japonicus HOM05D003990 ORTHO05D004925 2.9e-90 336.3 375 55.2
CsaV3_3G000920 Cucumis sativus L. HOM05D003990 ORTHO05D004925 3.8e-90 335.9 314 58.0
Gorai.003G075400 Gossypium raimondii HOM05D003990 ORTHO05D004925 4.9e-90 335.5 330 58.5
Eucgr.D01688 Eucalyptus grandis HOM05D003990 ORTHO05D004925 6.4e-90 335.1 377 55.2
Gohir.D03G086700 Gossypium hirsutum HOM05D003990 ORTHO05D004925 6.4e-90 335.1 330 58.5
Sed0016376 Sechium edule HOM05D003990 ORTHO05D004925 8.4e-90 334.7 312 59.0
Lj8A201T86 Lonicera japonica HOM05D003990 ORTHO05D004925 1.1e-89 334.3 276 65.9
AL6G44800 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 1.4e-89 334.0 364 54.9
Duzib205G1059 Durio zibethinus HOM05D003990 ORTHO05D004925 1.4e-89 334.0 330 58.5
Sp6g06750 Schrenkiella parvula HOM05D003990 ORTHO05D004925 1.4e-89 334.0 312 60.3
Ah.12g053140 Amaranthus hybridus HOM05D003990 ORTHO05D004925 2.4e-89 333.2 359 57.4
AT4G10750 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 3.2e-89 332.8 355 56.1
MSTRG.13719 Avicennia marina HOM05D003990 ORTHO05D004925 3.2e-89 332.8 361 54.6
TPR.G36963 Trifolium pratense HOM05D003990 ORTHO05D004925 5.4e-89 332.0 305 60.7
Nn1g00366 Nelumbo nucifera HOM05D003990 ORTHO05D004925 7.1e-89 331.6 360 56.7
Thecc.03G222400 Theobroma cacao HOM05D003990 ORTHO05D004925 7.1e-89 331.6 370 54.6
Thhalv10029450m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 9.3e-89 331.3 333 58.0
A09p28480 Brassica napus HOM05D003990 ORTHO05D004925 1.6e-88 330.5 345 55.4
BraA09t38413Z Brassica rapa HOM05D003990 ORTHO05D004925 1.6e-88 330.5 328 57.3
MELO3C013779.2 Cucumis melo HOM05D003990 ORTHO05D004925 1.6e-88 330.5 314 57.3
BcaB01g01511 Brassica carinata HOM05D003990 ORTHO05D004925 2.1e-88 330.1 362 53.9
CARHR255860 Cardamine hirsuta HOM05D003990 ORTHO05D004925 6.0e-88 328.6 346 55.5
CDE04G2232 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 6.0e-88 328.6 325 56.6
CANSAT21G0847 Cannabis sativa HOM05D003990 ORTHO05D004925 3.0e-87 326.2 357 54.9
COL.COLO4_10785 Corchorus olitorius HOM05D003990 ORTHO05D004925 3.0e-87 326.2 366 55.2
Aa31LG9G11320 Aethionema arabicum HOM05D003990 ORTHO05D004925 3.9e-87 325.9 307 59.0
THA.LOC104813054 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 3.9e-87 325.9 327 58.4
FvH4_5g11021 Fragaria vesca HOM05D003990 ORTHO05D004925 6.6e-87 325.1 279 65.2
BcaC04g21069 Brassica carinata HOM05D003990 ORTHO05D004925 1.5e-86 323.9 373 52.3
C09p36050 Brassica napus HOM05D003990 ORTHO05D004925 1.5e-86 323.9 373 52.3
BolC9t56444H Brassica oleracea HOM05D003990 ORTHO05D004925 1.5e-86 323.9 373 52.3
PSO135G0880 Papaver somniferum HOM05D003990 ORTHO05D004925 2.5e-86 323.2 387 50.9
PSO384G4439 Papaver somniferum HOM05D003990 ORTHO05D004925 7.3e-86 321.6 385 51.7
VMungo1215G2928 Vigna mungo HOM05D003990 ORTHO05D004925 2.8e-85 319.7 361 54.0
MBI12_g30966_MAGBIO Magnolia biondii HOM05D003990 ORTHO05D004925 1.4e-84 317.4 356 54.5
Cfa011937 Carpinus fangiana HOM05D003990 ORTHO05D004925 2.2e-82 310.1 309 57.3
QL02p029171 Quercus lobata HOM05D003990 ORTHO05D004925 3.8e-82 309.3 260 61.9
Phvul.003G021600 Phaseolus vulgaris HOM05D003990 ORTHO05D004925 1.9e-81 307.0 357 52.1
ATR0620G013 Amborella trichopoda HOM05D003990 ORTHO05D004925 1.0e-79 301.2 347 50.4
Oeu022040.1 Olea europaea HOM05D003990 ORTHO05D004925 8.7e-79 298.1 263 57.4
HPP92_008886 Vanilla planifolia HOM05D003990 ORTHO05D004925 3.3e-78 296.2 379 50.1
Duzib084G0313 Durio zibethinus HOM05D003990 ORTHO05D004925 1.6e-77 293.9 256 56.6
QL02p029158 Quercus lobata HOM05D003990 ORTHO05D004925 7.6e-75 285.0 261 57.1
COL.COLO4_10784 Corchorus olitorius HOM05D003990 ORTHO05D004925 9.9e-75 284.6 259 56.4
CiPaw.11G113600 Carya illinoinensis HOM05D003990 ORTHO05D004925 6.4e-74 282.0 259 59.1
Os09g0529900 Oryza sativa ssp. japonica HOM05D003990 ORTHO05D004925 3.2e-73 279.6 305 52.5
Zm00001eb103220 Zea mays HOM05D003990 ORTHO05D004925 2.7e-72 276.6 352 46.3
AUR62019907 Chenopodium quinoa HOM05D003990 ORTHO05D004925 1.5e-70 270.8 253 59.3
Sc01g0010580 Simmondsia chinensis HOM05D003990 ORTHO05D004925 2.5e-70 270.0 260 55.8
SEGI_30656 Sequoiadendron giganteum HOM05D003990 ORTHO05D004925 5.6e-70 268.9 252 54.0
AUR62019906 Chenopodium quinoa HOM05D003990 ORTHO05D004925 7.4e-70 268.5 265 52.8
EL10Ac5g12450 Beta vulgaris HOM05D003990 ORTHO05D004925 3.7e-69 266.2 260 58.1
AUR62007042 Chenopodium quinoa HOM05D003990 ORTHO05D004925 3.7e-69 266.2 265 53.2
Ah.12g053130 Amaranthus hybridus HOM05D003990 ORTHO05D004925 6.2e-69 265.4 265 53.6
AUR62007043 Chenopodium quinoa HOM05D003990 ORTHO05D004925 1.4e-68 264.2 254 57.9
Ca_12579_v3 Cicer arietinum L. HOM05D003990 ORTHO05D004925 1.8e-68 263.8 258 55.4
Psat6g044760 Pisum sativum HOM05D003990 ORTHO05D004925 3.1e-68 263.1 251 59.4
EL10Ac5g12452 Beta vulgaris HOM05D003990 ORTHO05D004925 4.0e-68 262.7 284 50.4
THA.LOC104815209 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 5.8e-67 258.8 258 53.5
arahy.Tifrunner.gnm1.ann1.LQZ0GD Arachis hypogaea HOM05D003990 ORTHO05D004925 1.3e-66 257.7 255 51.0
arahy.Tifrunner.gnm1.ann1.ZCAA4H Arachis hypogaea HOM05D003990 ORTHO05D004925 1.3e-66 257.7 255 51.0
A01p15340 Brassica napus HOM05D003990 ORTHO05D004925 1.7e-66 257.3 256 52.7
Thhalv10026820m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 1.7e-66 257.3 256 52.7
arahy.Tifrunner.gnm1.ann1.IT3SMZ Arachis hypogaea HOM05D003990 ORTHO05D004925 2.2e-66 256.9 254 50.4
arahy.Tifrunner.gnm1.ann1.Y0R09G Arachis hypogaea HOM05D003990 ORTHO05D004925 2.2e-66 256.9 254 50.4
arahy.Tifrunner.gnm1.ann1.3SR05H Arachis hypogaea HOM05D003990 ORTHO05D004925 2.9e-66 256.5 254 50.4
arahy.Tifrunner.gnm1.ann1.UPJ447 Arachis hypogaea HOM05D003990 ORTHO05D004925 2.9e-66 256.5 254 50.4
BolC1t01855H Brassica oleracea HOM05D003990 ORTHO05D004925 4.9e-66 255.8 256 52.3
Migut.O00797 Erythranthe guttata HOM05D003990 ORTHO05D004925 4.9e-66 255.8 183 72.1
C01p19290 Brassica napus HOM05D003990 ORTHO05D004925 4.2e-65 252.7 256 52.3
Aa31LG6G7280 Aethionema arabicum HOM05D003990 ORTHO05D004925 3.0e-63 246.5 268 49.3
BcaC09g50914 Brassica carinata HOM05D003990 ORTHO05D004925 1.5e-62 244.2 268 48.9
BolC1t01856H Brassica oleracea HOM05D003990 ORTHO05D004925 1.5e-62 244.2 288 47.2
C01p19300 Brassica napus HOM05D003990 ORTHO05D004925 1.9e-62 243.8 275 46.9
BraA01t01479Z Brassica rapa HOM05D003990 ORTHO05D004925 2.5e-62 243.4 267 49.4
AL7G29210 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 1.6e-61 240.7 256 50.0
A01p15350 Brassica napus HOM05D003990 ORTHO05D004925 2.8e-61 240.0 267 49.1
BcaNung01112 Brassica carinata HOM05D003990 ORTHO05D004925 3.7e-61 239.6 263 48.7
Carub.0007s1702 Capsella rubella HOM05D003990 ORTHO05D004925 2.4e-60 236.9 259 49.8
COL.COLO4_10783 Corchorus olitorius HOM05D003990 ORTHO05D004925 3.1e-60 236.5 231 54.5
Thhalv10027122m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 5.0e-58 229.2 255 48.6
BraA01t01478Z Brassica rapa HOM05D003990 ORTHO05D004925 8.5e-58 228.4 256 49.6
arahy.Tifrunner.gnm1.ann1.UE00R2 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.1e-57 228.0 252 51.2
AagrBONN_evm.TU.Sc2ySwM_117.985 Anthoceros agrestis HOM05D003990 ORTHO05D004925 1.9e-57 227.3 248 49.6
Glyma.07G166800 Glycine max HOM05D003990 ORTHO05D004925 7.2e-57 225.3 151 73.5
BcaC09g50915 Brassica carinata HOM05D003990 ORTHO05D004925 2.7e-56 223.4 230 50.9
Pp3c17_4700 Physcomitrium patens HOM05D003990 ORTHO05D004925 8.8e-55 218.4 282 45.0
Mapoly0141s0022 Marchantia polymorpha HOM05D003990 ORTHO05D004925 1.1e-54 218.0 280 45.7
Thecc.03G222500 Theobroma cacao HOM05D003990 ORTHO05D004925 4.3e-54 216.1 156 64.7
CARHR006280 Cardamine hirsuta HOM05D003990 ORTHO05D004925 9.7e-54 214.9 231 49.4
Haze_09152 Corylus avellana HOM05D003990 ORTHO05D004925 6.3e-53 212.2 196 57.7
arahy.Tifrunner.gnm1.ann1.VJUY72 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.7e-50 204.1 262 43.5
arahy.Tifrunner.gnm1.ann1.E0UK9T Arachis hypogaea HOM05D003990 ORTHO05D004925 2.2e-50 203.8 262 43.5
CARHR006270 Cardamine hirsuta HOM05D003990 ORTHO05D004925 1.4e-49 201.1 229 48.0
Sc16g0011220 Simmondsia chinensis HOM05D003990 ORTHO05D004925 1.9e-49 200.7 250 45.6
arahy.Tifrunner.gnm1.ann1.QV8INP Arachis hypogaea HOM05D003990 ORTHO05D004925 1.0e-47 194.9 259 45.2
QL02p029191 Quercus lobata HOM05D003990 ORTHO05D004925 1.7e-45 187.6 411 34.1
Sp7g22040 Schrenkiella parvula HOM05D003990 ORTHO05D004925 4.8e-45 186.0 182 52.7
unitig_52.g17196 Utricularia gibba HOM05D003990 ORTHO05D004925 1.5e-43 181.0 199 52.8
Aa31LG6G7290 Aethionema arabicum HOM05D003990 ORTHO05D004925 1.0e-42 178.3 155 56.1
CDE07G1159 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 1.3e-42 177.9 276 43.5
Zm00001eb207470 Zea mays HOM05D003990 ORTHO05D004925 3.0e-39 166.8 241 44.0
CARHR231480 Cardamine hirsuta HOM05D003990 ORTHO05D004925 6.3e-37 159.1 180 48.9
AT4G24080 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 2.2e-29 134.0 166 44.6
Zm00001eb366680 Zea mays HOM05D003990 ORTHO05D004925 2.4e-28 130.6 234 41.0
PRCOL_00003301 Prasinoderma coloniale HOM05D003990 ORTHO05D004925 7.0e-28 129.0 233 33.9
Potri.001G084900 Populus trichocarpa HOM05D003990 ORTHO05D004925 9.1e-28 128.6 122 56.6
Zm00001eb314200 Zea mays HOM05D003990 ORTHO05D004925 9.1e-28 128.6 236 33.9
Hma1.2p1_0440F.1_g153760 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 3.8e-26 123.2 192 42.2
FAN18G2679 Fragaria x ananassa HOM05D003990 ORTHO05D004925 5.0e-26 122.9 105 64.8
FAN18G2309 Fragaria x ananassa HOM05D003990 ORTHO05D004925 1.3e-21 108.2 68 79.4
Migut.E00635 Erythranthe guttata HOM05D003990 ORTHO05D004925 9.1e-20 102.1 96 59.4
arahy.Tifrunner.gnm1.ann1.S5BUNY Arachis hypogaea HOM05D003990 ORTHO05D004925 1.0e-18 98.6 65 73.8
AagrBONN_evm.TU.Sc2ySwM_228.2729 Anthoceros agrestis HOM05D003990 ORTHO05D004925 2.3e-18 97.4 231 34.6
CAN.G479.14 Capsicum annuum HOM05D003990 ORTHO05D004925 7.2e-17 92.4 102 47.1
Prupe.2G052300 Prunus persica HOM05D003990 ORTHO05D004925 3.6e-16 90.1 66 63.6
Hma1.2p1_0212F.1_g090250 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 1.4e-15 88.2 54 75.9
arahy.Tifrunner.gnm1.ann1.228U7D Arachis hypogaea HOM05D003990 ORTHO05D004925 5.2e-15 86.3 68 64.7
Haze_16436 Corylus avellana HOM05D003990 ORTHO05D004925 5.2e-15 86.3 181 38.1
Duzib068G0872 Durio zibethinus HOM05D003990 ORTHO05D004925 6.8e-15 85.9 76 57.9
QL02p029165 Quercus lobata HOM05D003990 ORTHO05D010865 4.1e-12 76.6 58 69.0
unitig_52.g17197 Utricularia gibba HOM05D003990 ORTHO05D004925 4.1e-12 76.6 74 58.1
EL10Ac6g14266 Beta vulgaris HOM05D003990 ORTHO05D004925 7.8e-11 72.4 74 48.6
AT4G24070 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 2.3e-10 70.9 62 59.7
VMungo0647G2082 Vigna mungo HOM05D003990 ORTHO05D004925 5.0e-10 69.7 74 52.7
Cfa021766 Carpinus fangiana HOM05D003990 ORTHO05D004925 6.6e-10 69.3 117 33.3
arahy.Tifrunner.gnm1.ann1.R8SYM2 Arachis hypogaea HOM05D003990 ORTHO05D004925 8.6e-10 68.9 90 42.2
Cre01.g015550 Chlamydomonas reinhardtii HOM05D003990 ORTHO05D004925 3.3e-09 67.0 104 36.5
AagrBONN_evm.TU.Sc2ySwM_344.3329 Anthoceros agrestis HOM05D003990 ORTHO05D071624 5.6e-09 66.2 275 27.6
Thhalv10027505m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 1.2e-08 65.1 69 47.8
QL02p029160 Quercus lobata HOM05D003990 ORTHO05D004925 1.2e-06 58.5 47 57.4


User provided reference genes

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