Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11488 Vaccinium macrocarpon HOM05D008304 ORTHO05D004056 1.2e-37 159.5 88 100.0
Haze_09200 Corylus avellana HOM05D008304 ORTHO05D004056 6.5e-15 84.0 88 64.8
Cfa011898 Carpinus fangiana HOM05D008304 ORTHO05D004056 1.1e-14 83.2 88 63.6
CSS0003921 Camellia sinensis var. sinensis HOM05D008304 ORTHO05D004056 2.5e-14 82.0 92 62.0
GSVIVG01019681001 Vitis vinifera HOM05D008304 ORTHO05D004056 3.6e-13 78.2 88 61.4
Actinidia22217 Actinidia chinensis HOM05D008304 ORTHO05D004056 1.8e-12 75.9 88 64.8
CiPaw.11G110100 Carya illinoinensis HOM05D008304 ORTHO05D004056 1.8e-12 75.9 88 61.4
TAR629G3464 Trochodendron aralioides HOM05D008304 ORTHO05D004056 2.3e-12 75.5 88 64.8
Dinv12896 Davidia involucrata HOM05D008304 ORTHO05D004056 6.7e-12 73.9 88 60.2
QL02p027330 Quercus lobata HOM05D008304 ORTHO05D004056 1.1e-11 73.2 88 61.4
Nitab4.5_0002520g0050 Nicotiana tabacum HOM05D008304 ORTHO05D004056 3.3e-11 71.6 91 56.0
Duzib205G1739 Durio zibethinus HOM05D008304 ORTHO05D004056 4.3e-11 71.2 88 58.0
Sabra16G0303400 Salix brachista HOM05D008304 ORTHO05D004056 1.7e-10 69.3 90 55.6
Cpa.g.sc37.98 Carica papaya HOM05D008304 ORTHO05D004056 2.8e-10 68.6 88 55.7
Gorai.008G260200 Gossypium raimondii HOM05D008304 ORTHO05D004056 2.8e-10 68.6 88 55.7
CDE04G3503 Ceratophyllum demersum HOM05D008304 ORTHO05D004056 4.8e-10 67.8 88 52.3
Thecc.03G217700 Theobroma cacao HOM05D008304 ORTHO05D004056 4.8e-10 67.8 88 56.8
COL.COLO4_10829 Corchorus olitorius HOM05D008304 ORTHO05D004056 6.3e-10 67.4 88 56.8
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 6.3e-10 67.4 88 55.7
Manes.01G055200 Manihot esculenta HOM05D008304 ORTHO05D004056 8.2e-10 67.0 89 58.4
Dinv18759 Davidia involucrata HOM05D008304 ORTHO05D004056 1.1e-09 66.6 94 53.2
Gohir.D12G243000 Gossypium hirsutum HOM05D008304 ORTHO05D004056 1.4e-09 66.2 88 54.5
Potri.001G449633 Populus trichocarpa HOM05D008304 ORTHO05D004056 3.1e-09 65.1 88 55.7
Sed0018210 Sechium edule HOM05D008304 ORTHO05D004056 5.3e-09 64.3 88 56.8
Gohir.D09G182600 Gossypium hirsutum HOM05D008304 ORTHO05D004056 9.1e-09 63.5 88 48.9
Gorai.006G204900 Gossypium raimondii HOM05D008304 ORTHO05D004056 9.1e-09 63.5 88 48.9
Oeu015753.1 Olea europaea HOM05D008304 ORTHO05D004056 9.1e-09 63.5 88 53.4
Gohir.A09G187800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 1.5e-08 62.8 88 48.9
ClCG01G001410 Citrullus lanatus HOM05D008304 ORTHO05D004056 2.0e-08 62.4 91 54.9
Peaxi162Scf00074g00131 Petunia axillaris HOM05D008304 ORTHO05D004056 2.0e-08 62.4 90 50.0
Oeu042857.1 Olea europaea HOM05D008304 ORTHO05D004056 2.6e-08 62.0 88 50.0
Prupe.5G132900 Prunus persica HOM05D008304 ORTHO05D004056 3.4e-08 61.6 88 53.4
CANSAT21G0162 Cannabis sativa HOM05D008304 ORTHO05D004056 4.5e-08 61.2 88 54.5
Atru.chr9.1863 Acer truncatum HOM05D008304 ORTHO05D004056 7.7e-08 60.5 89 55.1
MD06G1122200 Malus domestica HOM05D008304 ORTHO05D004056 1.3e-07 59.7 88 53.4
Sabra11G0136700 Salix brachista HOM05D008304 ORTHO05D004056 2.9e-07 58.5 88 50.0
Sabra11G0148600 Salix brachista HOM05D008304 ORTHO05D004056 2.9e-07 58.5 88 50.0
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 2.9e-07 58.5 88 48.9
MD14G1138600 Malus domestica HOM05D008304 ORTHO05D004056 6.5e-07 57.4 88 48.9
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 1.4e-06 56.2 88 47.7
Migut.E00724 Erythranthe guttata HOM05D008304 ORTHO05D004056 1.4e-06 56.2 88 47.7
FvH4_5g10570 Fragaria vesca HOM05D008304 ORTHO05D004056 1.4e-06 56.2 89 48.3
FAN04G0709 Fragaria x ananassa HOM05D008304 ORTHO05D012179 1.4e-06 56.2 89 48.3
FAN13G2184 Fragaria x ananassa HOM05D008304 ORTHO05D012179 1.4e-06 56.2 89 48.3
FAN18G4101 Fragaria x ananassa HOM05D008304 ORTHO05D012179 1.4e-06 56.2 89 48.3
CAN.G567.106 Capsicum annuum HOM05D008304 ORTHO05D004056 1.9e-06 55.8 79 50.6
PGR042G2542 Punica granatum HOM05D008304 ORTHO05D004056 1.9e-06 55.8 92 51.1
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 2.5e-06 55.5 90 50.0
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 3.2e-06 55.1 88 46.6
Cc08_g16980 Coffea canephora HOM05D008304 ORTHO05D004056 3.2e-06 55.1 96 49.0
Ciclev10023139m.g Citrus clementina HOM05D008304 ORTHO05D004056 5.5e-06 54.3 88 53.4
MBI04_g22063_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 5.5e-06 54.3 88 47.7
MBI12_g20132_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 7.2e-06 53.9 88 51.1


User provided reference genes

Program Settings