Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11487 Vaccinium macrocarpon HOM05D008613 ORTHO05D006961 6.7e-70 267.3 142 100.0
Rhsim02G0253700 Rhododendron simsii HOM05D008613 ORTHO05D006961 6.1e-15 84.7 97 54.6
QL02p027286 Quercus lobata HOM05D008613 ORTHO05D006961 1.1e-11 73.9 97 42.3
Prupe.5G133100 Prunus persica HOM05D008613 ORTHO05D006961 9.2e-11 70.9 96 47.9
Gohir.D03G084800 Gossypium hirsutum HOM05D008613 ORTHO05D006961 1.6e-10 70.1 97 48.5
FAN04G2016 Fragaria x ananassa HOM05D008613 ORTHO05D006961 2.0e-10 69.7 143 39.2
Duzib205G1760 Durio zibethinus HOM05D008613 ORTHO05D006961 3.5e-10 68.9 100 44.0
Gohir.A02G099100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 3.5e-10 68.9 97 47.4
Haze_09201 Corylus avellana HOM05D019613 ORTHO05D006961 5.9e-10 68.2 97 40.2
Gorai.003G077900 Gossypium raimondii HOM05D008613 ORTHO05D006961 5.9e-10 68.2 97 47.4
Thecc.03G217500 Theobroma cacao HOM05D008613 ORTHO05D006961 7.8e-10 67.8 97 43.3
Actinidia22218 Actinidia chinensis HOM05D008613 ORTHO05D006961 2.3e-09 66.2 92 47.8
CSS0022315 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 2.9e-09 65.9 97 41.2
Sabra16G0303900 Salix brachista HOM05D008613 ORTHO05D006961 2.9e-09 65.9 100 40.0
PGSC0003DMG400043889 Solanum tuberosum HOM05D008837 ORTHO05D006961 2.9e-09 65.9 101 44.6
Potri.001G449800 Populus trichocarpa HOM05D008613 ORTHO05D006961 3.8e-09 65.5 97 42.3
Potri.001G449900 Populus trichocarpa HOM05D008613 ORTHO05D006961 3.8e-09 65.5 97 42.3
Potri.001G450000 Populus trichocarpa HOM05D008613 ORTHO05D006961 3.8e-09 65.5 100 42.0
TAR629G3181 Trochodendron aralioides HOM05D008613 ORTHO05D006961 3.8e-09 65.5 97 44.3
FvH4_5g10560 Fragaria vesca HOM05D008613 ORTHO05D006961 5.0e-09 65.1 102 46.1
FAN18G1327 Fragaria x ananassa HOM05D008613 ORTHO05D006961 5.0e-09 65.1 102 46.1
Sabra16G0303600 Salix brachista HOM05D008613 ORTHO05D006961 5.0e-09 65.1 97 40.2
Sabra16G0303800 Salix brachista HOM05D008613 ORTHO05D006961 5.0e-09 65.1 97 40.2
Manes.01G055100 Manihot esculenta HOM05D008613 ORTHO05D006961 6.6e-09 64.7 97 39.2
Sabra16G0303700 Salix brachista HOM05D008613 ORTHO05D006961 6.6e-09 64.7 100 42.0
FAN08G0050 Fragaria x ananassa HOM05D008613 ORTHO05D006961 1.5e-08 63.5 100 46.0
Gohir.A08G109100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 1.5e-08 63.5 98 43.9
CSS0023145 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 1.9e-08 63.2 97 40.2
Cpa.g.sc37.99 Carica papaya HOM05D008613 ORTHO05D006961 1.9e-08 63.2 97 43.3
Sabra16G0303500 Salix brachista HOM05D008613 ORTHO05D006961 1.9e-08 63.2 97 40.2
Cfa011897 Carpinus fangiana HOM05D019613 ORTHO05D006961 2.5e-08 62.8 97 40.2
Manes.01G055000 Manihot esculenta HOM05D008613 ORTHO05D006961 2.5e-08 62.8 97 38.1
Atru.chr9.1866 Acer truncatum HOM05D008613 ORTHO05D006961 4.3e-08 62.0 101 42.6
Ciclev10023060m.g Citrus clementina HOM05D008837 ORTHO05D006961 4.3e-08 62.0 96 40.6
RcHm_v2.0_Chr7g0187591 Rosa chinensis HOM05D008613 ORTHO05D006961 4.3e-08 62.0 99 42.4
Gohir.D08G121900 Gossypium hirsutum HOM05D008613 ORTHO05D006961 9.5e-08 60.8 97 41.2
CiPaw.11G110000 Carya illinoinensis HOM05D008613 ORTHO05D006961 1.6e-07 60.1 97 43.3
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 2.1e-07 59.7 98 41.8
Solyc03g081330.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 2.1e-07 59.7 100 42.0
Potri.012G021602 Populus trichocarpa HOM05D008837 ORTHO05D006961 2.8e-07 59.3 102 40.2
Gorai.004G128500 Gossypium raimondii HOM05D008613 ORTHO05D006961 3.6e-07 58.9 97 41.2
Aa31LG6G7520 Aethionema arabicum HOM05D008703 ORTHO05D006961 4.7e-07 58.5 96 36.5
Eucgr.D01659 Eucalyptus grandis HOM05D008613 ORTHO05D006961 4.7e-07 58.5 99 40.4
Nn3g18877 Nelumbo nucifera HOM05D031625 ORTHO05D006961 4.7e-07 58.5 105 42.9
Nn3g18879 Nelumbo nucifera HOM05D031625 ORTHO05D006961 4.7e-07 58.5 105 42.9
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 4.7e-07 58.5 100 41.0
COL.COLO4_10830 Corchorus olitorius HOM05D008613 ORTHO05D006961 6.1e-07 58.2 94 41.5
Prupe.5G133200 Prunus persica HOM05D008613 ORTHO05D006961 8.0e-07 57.8 98 41.8
Nitab4.5_0000319g0150 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.0e-06 57.4 103 36.9
Solyc03g082350.2 Solanum lycopersicum HOM05D008837 ORTHO05D006961 1.0e-06 57.4 100 37.0
Sopen03g022050 Solanum pennellii HOM05D008837 ORTHO05D006961 1.4e-06 57.0 100 41.0
PGSC0003DMG400003216 Solanum tuberosum HOM05D008837 ORTHO05D006961 1.8e-06 56.6 96 39.6
THA.LOC104815392 Tarenaya hassleriana HOM05D008703 ORTHO05D006961 1.8e-06 56.6 96 38.5
Dinv29215 Davidia involucrata HOM05D008837 ORTHO05D006961 2.3e-06 56.2 95 41.1
DCAR_020368 Daucus carota HOM05D008837 ORTHO05D006961 3.0e-06 55.8 96 37.5
Actinidia08695 Actinidia chinensis HOM05D008837 ORTHO05D006961 5.2e-06 55.1 97 40.2
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 6.8e-06 54.7 97 39.2
Nitab4.5_0005040g0030 Nicotiana tabacum HOM05D008837 ORTHO05D006961 8.9e-06 54.3 99 36.4


User provided reference genes

Program Settings