Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11431 Vaccinium macrocarpon HOM05D007666 ORTHO05D009567 3.2e-239 831.6 516 100.0
Rhsim02G0242700 Rhododendron simsii HOM05D007666 ORTHO05D009567 2.3e-104 383.6 526 51.5
Dinv38838 Davidia involucrata HOM05D007666 ORTHO05D009567 1.1e-77 295.0 509 40.1
CSS0011760 Camellia sinensis var. sinensis HOM05D007666 ORTHO05D009567 4.6e-76 289.7 517 39.3
Actinidia22150 Actinidia chinensis HOM05D007666 ORTHO05D009567 1.7e-59 234.6 514 44.4
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 5.8e-55 219.5 518 37.1
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 1.9e-53 214.5 351 40.5
Cpa.g.sc79.41 Carica papaya HOM05D007666 ORTHO05D009567 5.4e-53 213.0 521 34.5
MD06G1105600 Malus domestica HOM05D007666 ORTHO05D009567 1.0e-51 208.8 529 34.4
Prupe.5G117900 Prunus persica HOM05D007666 ORTHO05D009567 1.7e-51 208.0 525 33.3
Sabra03G0100600 Salix brachista HOM05D007666 ORTHO05D009567 3.6e-49 200.3 516 36.4
Potri.001G092300 Populus trichocarpa HOM05D007666 ORTHO05D009567 1.1e-48 198.7 344 39.8
Hma1.2p1_0229F.1_g097150 Hydrangea macrophylla HOM05D007666 ORTHO05D009567 2.4e-48 197.6 513 34.9
ClCG07G014990 Citrullus lanatus HOM05D007666 ORTHO05D009567 5.3e-48 196.4 512 35.5
CiPaw.12G083800 Carya illinoinensis HOM05D007666 ORTHO05D009567 1.2e-47 195.3 523 31.4
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 2.6e-47 194.1 359 37.3
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 1.1e-45 188.7 342 37.4
Ciclev10020669m.g Citrus clementina HOM05D007666 ORTHO05D009567 5.4e-45 186.4 510 32.7
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 1.2e-44 185.3 353 35.7
Manes.01G049375 Manihot esculenta HOM05D007666 ORTHO05D009567 1.7e-43 181.4 371 35.6
CsaV3_4G006520 Cucumis sativus L. HOM05D007666 ORTHO05D009567 2.3e-43 181.0 343 36.7
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 3.0e-43 180.6 356 36.0
Duzib068G1371 Durio zibethinus HOM05D007666 ORTHO05D009567 5.1e-43 179.9 350 35.7
Aqoxy5G04207 Aquilegia oxysepala HOM05D007666 ORTHO05D009567 8.7e-43 179.1 350 36.6
PSO384G2287 Papaver somniferum HOM05D007666 ORTHO05D009567 1.5e-42 178.3 370 34.9
FAN18G0717 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.9e-42 177.9 518 32.4
Sed0008321 Sechium edule HOM05D007666 ORTHO05D009567 3.3e-42 177.2 358 36.6
FAN08G0521 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.3e-41 175.3 525 32.6
FvH4_5g04480 Fragaria vesca HOM05D007666 ORTHO05D009567 1.6e-41 174.9 518 32.2
FAN13G3316 Fragaria x ananassa HOM05D007666 ORTHO05D009567 2.1e-41 174.5 518 32.2
FAN18G2245 Fragaria x ananassa HOM05D007666 ORTHO05D009567 3.6e-41 173.7 518 32.2
Gorai.003G080900 Gossypium raimondii HOM05D007666 ORTHO05D009567 2.4e-40 171.0 355 34.4
Gohir.D03G082600 Gossypium hirsutum HOM05D007666 ORTHO05D009567 3.1e-40 170.6 355 34.4
Sed0007649 Sechium edule HOM05D007666 ORTHO05D009567 3.1e-40 170.6 344 36.6
Atru.chr9.2008 Acer truncatum HOM05D007666 ORTHO05D009567 4.0e-40 170.2 527 30.4
RcHm_v2.0_Chr7g0195021 Rosa chinensis HOM05D007666 ORTHO05D009567 4.0e-40 170.2 373 35.9
TAR636G3598 Trochodendron aralioides HOM05D007666 ORTHO05D009567 4.0e-40 170.2 351 35.9
Ah.07g197340 Amaranthus hybridus HOM05D007666 ORTHO05D009567 9.0e-40 169.1 362 34.3
HanXRQChr06g0166511 Helianthus annuus HOM05D007666 ORTHO05D009567 3.4e-39 167.2 369 33.3
EL10Ac5g12908 Beta vulgaris HOM05D007666 ORTHO05D009567 1.3e-38 165.2 361 34.1
Dinv37538 Davidia involucrata HOM05D007666 ORTHO05D009567 1.1e-37 162.2 240 45.4
Actinidia04207 Actinidia chinensis HOM05D007666 ORTHO05D009567 2.4e-37 161.0 239 47.7
Lj2C168T16 Lonicera japonica HOM05D007666 ORTHO05D009567 2.4e-37 161.0 329 35.6
CiPaw.11G122000 Carya illinoinensis HOM05D007666 ORTHO05D009567 5.4e-37 159.8 499 31.7
Hund14226 Selenicereus undatus HOM05D007666 ORTHO05D009567 1.2e-36 158.7 349 35.2
Gohir.A02G101700 Gossypium hirsutum HOM05D007666 ORTHO05D009567 1.8e-35 154.8 355 32.7
Cc08_g15990 Coffea canephora HOM05D007666 ORTHO05D009567 3.0e-35 154.1 365 34.8
TWI60G1340 Tripterygium wilfordii HOM05D007666 ORTHO05D009567 5.1e-35 153.3 363 34.2
AUR62010832 Chenopodium quinoa HOM05D007666 ORTHO05D009567 8.7e-35 152.5 351 33.9
Peaxi162Scf00074g00106 Petunia axillaris HOM05D007666 ORTHO05D009567 1.5e-34 151.8 364 34.1
Nn3g19029 Nelumbo nucifera HOM05D007666 ORTHO05D009567 1.9e-34 151.4 156 55.1
MSTRG.25667 Avicennia marina HOM05D007666 ORTHO05D009567 7.4e-34 149.4 370 31.1
DCAR_005041 Daucus carota HOM05D007666 ORTHO05D009567 7.4e-34 149.4 179 46.9
PGSC0003DMG400012289 Solanum tuberosum HOM05D007666 ORTHO05D009567 2.1e-33 147.9 350 34.3
Sopen08g030510 Solanum pennellii HOM05D007666 ORTHO05D009567 3.1e-32 144.1 350 33.7
Gohir.A09G190500 Gossypium hirsutum HOM05D007666 ORTHO05D009567 9.0e-32 142.5 342 30.7
Nitab4.5_0005537g0030 Nicotiana tabacum HOM05D007666 ORTHO05D009567 1.5e-31 141.7 356 32.9
Atru.chr2.3612 Acer truncatum HOM05D007666 ORTHO05D009567 2.0e-31 141.4 159 49.7
Gorai.006G207700 Gossypium raimondii HOM05D007666 ORTHO05D009567 2.0e-31 141.4 342 30.7
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 2.6e-31 141.0 345 33.0
Nitab4.5_0001231g0060 Nicotiana tabacum HOM05D007666 ORTHO05D009567 4.5e-31 140.2 365 32.6
Gohir.D09G185200 Gossypium hirsutum HOM05D007666 ORTHO05D009567 5.8e-31 139.8 342 30.4
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 5.8e-31 139.8 343 31.8
SGA_v2.0_scaffold305G47963 Striga asiatica HOM05D007666 ORTHO05D009567 4.9e-30 136.7 360 33.1
AL2G10470 Arabidopsis lyrata HOM05D007666 ORTHO05D009567 1.3e-27 128.6 379 30.1
ECA246G0366 Erigeron canadensis HOM05D007666 ORTHO05D009567 1.3e-27 128.6 363 28.9
CARHR046550 Cardamine hirsuta HOM05D007666 ORTHO05D009567 1.8e-27 128.3 394 29.7
Carub.0002s0039 Capsella rubella HOM05D007666 ORTHO05D009567 3.9e-27 127.1 391 29.4
Thhalv10023582m.g Eutrema salsugineum HOM05D007666 ORTHO05D009567 8.7e-27 125.9 378 29.4
MD14G1127900 Malus domestica HOM05D007666 ORTHO05D009567 1.9e-26 124.8 145 51.7
AT1G64385 Arabidopsis thaliana HOM05D007666 ORTHO05D009567 1.6e-25 121.7 375 29.9
AUR62019830 Chenopodium quinoa HOM05D007666 ORTHO05D009567 1.6e-25 121.7 317 32.5
THA.LOC104817649 Tarenaya hassleriana HOM05D007666 ORTHO05D009567 2.8e-25 120.9 386 32.1
COL.COLO4_10690 Corchorus olitorius HOM05D007666 ORTHO05D009567 4.8e-25 120.2 358 32.1
Lsat_1_v5_gn_3_10540 Lactuca sativa HOM05D007666 ORTHO05D009567 1.4e-24 118.6 374 29.9
SalBow1G7426 Salvia bowleyana HOM05D007666 ORTHO05D009567 6.9e-24 116.3 367 29.4
SpUn0393_0010 Schrenkiella parvula HOM05D007666 ORTHO05D009567 2.6e-23 114.4 373 29.0
BcaB07g31505 Brassica carinata HOM05D007666 ORTHO05D009567 7.6e-23 112.8 375 31.2
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 1.3e-22 112.1 367 30.8
BraA09t37080Z Brassica rapa HOM05D007666 ORTHO05D009567 3.2e-21 107.5 377 29.7
C09p17230 Brassica napus HOM05D007666 ORTHO05D009567 1.6e-20 105.1 358 30.7
BolC9t54623H Brassica oleracea HOM05D007666 ORTHO05D009567 1.6e-20 105.1 358 30.7
A09p14330 Brassica napus HOM05D007666 ORTHO05D009567 2.7e-20 104.4 377 29.4
Aa31LG2G1390 Aethionema arabicum HOM05D007666 ORTHO05D009567 7.9e-20 102.8 357 30.0
BcaC04g22624 Brassica carinata HOM05D007666 ORTHO05D009567 7.9e-20 102.8 358 29.9
Duzib205G0056 Durio zibethinus HOM05D007666 ORTHO05D009567 8.7e-19 99.4 349 28.1
HPP92_005518 Vanilla planifolia HOM05D007666 ORTHO05D009567 3.3e-18 97.4 344 27.0
FAN04G1782 Fragaria x ananassa HOM05D007666 ORTHO05D009567 8.2e-17 92.8 243 33.7
Solyc08g082240.1 Solanum lycopersicum HOM05D007666 ORTHO05D009567 1.6e-12 78.6 78 60.3
Zm00001eb344230 Zea mays HOM05D007666 ORTHO05D009567 9.7e-10 69.3 350 27.7
RcHm_v2.0_Chr3g0460451 Rosa chinensis HOM05D003589 ORTHO05D005170 8.2e-09 66.2 150 38.0
Psat3g118720 Pisum sativum HOM05D003589 ORTHO05D005170 1.8e-08 65.1 155 35.5
Ca_02266_v3 Cicer arietinum L. HOM05D003589 ORTHO05D005170 2.0e-07 61.6 163 33.1
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 4.5e-07 60.5 141 40.4
vmacro08941 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 5.9e-07 60.1 152 38.8


User provided reference genes

Program Settings