Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 1.7e-274 949.1 631 100.0
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 9.6e-169 597.8 604 74.3
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 1.9e-137 493.8 597 66.2
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 1.7e-117 427.6 602 60.6
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 1.6e-110 404.4 597 57.8
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 8.5e-109 398.7 602 55.1
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 3.2e-108 396.7 603 55.7
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 3.0e-106 390.2 595 56.5
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 2.8e-104 383.6 598 50.3
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 1.2e-102 378.3 595 55.1
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 2.7e-102 377.1 637 42.2
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 2.9e-101 373.6 598 57.5
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 1.1e-100 371.7 595 56.6
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 5.5e-100 369.4 596 53.4
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 9.4e-100 368.6 588 54.9
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 8.0e-99 365.5 596 54.2
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 8.0e-99 365.5 588 54.3
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 1.4e-98 364.8 595 48.9
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 1.8e-98 364.4 591 46.9
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 2.0e-97 360.9 592 52.2
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 1.7e-96 357.8 593 57.5
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 3.7e-96 356.7 596 52.2
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 4.1e-95 353.2 592 45.1
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 4.1e-95 353.2 602 53.0
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 5.4e-95 352.8 588 56.6
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 7.0e-95 352.4 590 52.2
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 9.1e-95 352.1 598 53.0
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 1.2e-94 351.7 602 47.7
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 1.2e-94 351.7 593 55.6
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 3.5e-94 350.1 600 47.5
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 3.5e-94 350.1 588 50.9
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 4.5e-94 349.7 602 53.0
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 5.9e-94 349.4 593 51.6
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 5.0e-93 346.3 589 41.6
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 8.6e-93 345.5 588 56.5
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 1.9e-92 344.4 597 42.0
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 4.2e-92 343.2 597 54.4
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.2e-91 341.7 588 48.1
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 1.0e-90 338.6 621 42.5
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 1.0e-90 338.6 594 45.8
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 1.4e-90 338.2 604 55.8
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 1.8e-90 337.8 594 49.8
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 2.3e-90 337.4 597 50.8
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 4.0e-90 336.7 433 66.5
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 4.0e-90 336.7 596 36.2
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 5.7e-89 332.8 613 48.8
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 9.8e-89 332.0 588 55.3
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 1.1e-87 328.6 590 40.7
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 1.8e-87 327.8 602 47.8
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 1.6e-86 324.7 588 52.6
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 2.7e-86 323.9 420 55.2
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 5.9e-86 322.8 594 52.5
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 1.3e-85 321.6 604 51.5
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 1.3e-85 321.6 588 53.4
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 6.6e-85 319.3 593 49.7
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 4.3e-84 316.6 602 54.5
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 9.5e-84 315.5 596 43.6
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 1.2e-81 308.5 485 50.1
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 1.3e-80 305.1 599 49.2
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 2.9e-80 303.9 590 52.4
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 3.7e-80 303.5 592 46.5
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 3.2e-79 300.4 487 54.8
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.6e-78 298.1 624 48.6
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 6.6e-77 292.7 593 47.4
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 4.7e-75 286.6 599 48.9
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 6.2e-75 286.2 461 58.6
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 2.3e-74 284.3 594 46.5
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 3.1e-74 283.9 596 50.3
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 5.2e-74 283.1 593 48.1
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 5.2e-74 283.1 593 48.1
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 6.8e-74 282.7 598 46.0
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 2.0e-73 281.2 595 50.9
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 3.4e-73 280.4 592 48.0
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 3.4e-73 280.4 592 48.0
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 3.4e-73 280.4 607 49.3
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 1.7e-72 278.1 458 54.1
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 4.9e-72 276.6 588 51.9
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 6.4e-72 276.2 593 47.7
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 6.4e-72 276.2 593 50.4
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 4.1e-71 273.5 453 47.9
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 1.6e-70 271.6 595 50.4
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 1.2e-67 261.9 592 49.0
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 1.1e-66 258.8 424 55.0
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 4.7e-59 233.4 422 55.0
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 4.0e-58 230.3 424 57.8
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 4.4e-57 226.9 596 41.9
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 4.2e-55 220.3 591 44.8
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 1.3e-53 215.3 593 47.4
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 2.3e-53 214.5 462 48.7
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 6.6e-53 213.0 593 46.5
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 2.5e-52 211.1 596 42.4
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 5.6e-52 209.9 593 45.7
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 6.2e-51 206.5 588 46.3
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 2.4e-50 204.5 590 46.8
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 3.4e-49 200.7 487 54.0
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 6.4e-48 196.4 586 26.6
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 2.4e-47 194.5 593 44.4
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 2.4e-47 194.5 479 50.1
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 8.7e-45 186.0 593 38.8
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 5.6e-44 183.3 609 30.7
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 5.6e-44 183.3 609 30.7
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 4.5e-41 173.7 581 38.6
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 4.6e-38 163.7 595 44.2
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 7.9e-30 136.3 238 39.1
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 8.2e-27 126.3 168 45.8
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.9e-24 117.9 246 32.1
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.9e-23 115.2 153 49.0
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 6.3e-19 100.1 171 50.3
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 4.2e-07 60.8 51 58.8
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 5.5e-07 60.5 131 55.0
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 9.4e-07 59.7 65 46.2
HanXRQChr09g0272151 Helianthus annuus HOM05D006572 ORTHO05D008181 1.6e-06 58.9 51 62.7
Medtr0050s0150 Medicago truncatula HOM05D006572 ORTHO05D008181 2.7e-06 58.2 87 42.5
Actinidia27580 Actinidia chinensis HOM05D006572 ORTHO05D008181 6.1e-06 57.0 97 46.4
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 6.1e-06 57.0 636 32.4


User provided reference genes

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