Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 4.6e-208 727.6 361 100.0
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 5.3e-180 634.4 359 86.9
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 6.5e-162 574.3 356 80.1
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 3.9e-159 565.1 346 82.1
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 2.8e-149 532.3 390 68.2
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 7.7e-147 524.2 360 71.7
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 1.3e-146 523.5 353 70.5
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 3.8e-146 521.9 354 72.0
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 5.0e-146 521.5 354 71.5
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 5.0e-146 521.5 354 72.6
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 1.9e-145 519.6 349 72.2
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 3.2e-145 518.8 355 71.5
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 4.2e-145 518.5 355 71.8
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 7.2e-145 517.7 353 71.1
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.2e-144 516.9 354 72.0
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 3.6e-144 515.4 354 71.8
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 6.1e-144 514.6 351 70.4
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 1.4e-143 513.5 354 70.9
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 6.7e-143 511.1 352 70.2
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 4.4e-142 508.4 355 70.1
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 5.7e-142 508.1 350 71.4
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 1.7e-141 506.5 357 68.6
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 2.2e-141 506.1 350 70.9
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 6.3e-141 504.6 349 69.9
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 8.2e-141 504.2 350 70.9
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 1.4e-140 503.4 357 67.8
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 1.8e-140 503.1 350 68.0
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.4e-140 502.7 351 69.5
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 7.0e-140 501.1 357 68.1
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.0e-139 499.6 351 69.2
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 2.0e-139 499.6 355 69.3
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 2.7e-139 499.2 353 67.4
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 5.9e-139 498.0 350 71.1
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.0e-138 497.3 393 64.6
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 1.7e-138 496.5 352 69.9
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 2.2e-138 496.1 356 68.3
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 2.9e-138 495.7 359 68.8
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 2.9e-138 495.7 359 68.8
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 2.9e-138 495.7 359 68.8
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 2.9e-138 495.7 411 61.8
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 5.0e-138 495.0 353 69.4
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 6.5e-138 494.6 357 67.5
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 6.5e-138 494.6 353 66.9
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 2.5e-137 492.7 353 68.6
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 4.2e-137 491.9 353 68.8
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 4.2e-137 491.9 357 67.8
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 4.2e-137 491.9 359 66.9
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 5.5e-137 491.5 350 67.4
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 5.5e-137 491.5 353 66.0
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 7.2e-137 491.1 353 66.3
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 1.2e-136 490.3 349 67.6
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 2.7e-136 489.2 349 69.1
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 1.0e-135 487.3 351 66.7
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.0e-135 487.3 355 67.9
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 6.8e-135 484.6 357 65.5
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 8.8e-135 484.2 356 68.5
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 1.2e-134 483.8 353 66.9
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 2.0e-134 483.0 359 66.0
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 2.6e-134 482.6 355 65.6
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 1.7e-133 479.9 318 73.9
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 8.3e-133 477.6 360 65.0
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 8.3e-133 477.6 354 66.1
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 4.1e-132 475.3 355 63.7
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 1.0e-130 470.7 349 66.2
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 1.3e-130 470.3 354 66.7
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 3.8e-130 468.8 352 65.9
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 7.2e-129 464.5 350 63.7
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 3.6e-128 462.2 318 71.7
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 6.8e-127 458.0 350 63.4
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.2e-126 457.2 318 72.0
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 1.7e-125 453.4 318 68.9
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 8.3e-125 451.1 350 64.3
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 5.4e-124 448.4 355 62.5
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 4.5e-123 445.3 351 61.8
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.7e-122 443.4 323 68.4
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 3.8e-122 442.2 351 64.1
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 2.5e-121 439.5 348 59.5
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 3.0e-119 432.6 352 61.9
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 1.4e-116 423.7 352 60.2
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 6.8e-111 404.8 285 70.9
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 4.0e-95 352.4 355 47.6
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 8.9e-95 351.3 343 51.0
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 1.5e-94 350.5 226 73.5
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 1.5e-94 350.5 348 53.7
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 8.4e-93 344.7 343 51.3
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 1.9e-92 343.6 241 70.1
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 3.5e-91 339.3 343 53.9
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 1.4e-87 327.4 331 50.2
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 5.4e-76 288.9 298 53.0
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 6.2e-72 275.4 215 65.6
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 3.1e-63 246.5 176 67.0
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 4.0e-63 246.1 466 34.1
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 4.2e-60 236.1 182 62.6
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 4.6e-43 179.5 167 55.1
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.1e-41 174.9 129 63.6
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.1e-41 174.9 129 63.6
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 1.4e-34 151.4 272 36.0
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 9.4e-28 128.6 159 45.9
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 3.6e-19 100.1 88 54.5
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 3.4e-17 93.6 104 44.2
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 2.2e-16 90.9 74 63.5
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 8.3e-16 89.0 88 44.3
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 4.2e-12 76.6 54 70.4
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 5.7e-09 66.2 82 43.9


User provided reference genes

Program Settings