Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11418 Vaccinium macrocarpon HOM05D003548 ORTHO05D004066 1.4e-151 540.4 491 100.0
CSS0042414 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 1.8e-13 81.6 157 40.1
CSS0019271 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 2.3e-13 81.3 157 40.1
Rhsim02G0237300 Rhododendron simsii HOM05D003548 ORTHO05D004066 4.0e-13 80.5 97 48.5
CiPaw.11G126900 Carya illinoinensis HOM05D003548 ORTHO05D004066 1.7e-11 75.1 157 43.3
Rhsim02G0237200 Rhododendron simsii HOM05D003548 ORTHO05D004066 1.7e-11 75.1 148 41.9
COL.COLO4_08334 Corchorus olitorius HOM05D003548 ORTHO05D004066 2.2e-11 74.7 153 42.5
Thecc.03G289200 Theobroma cacao HOM05D003548 ORTHO05D004066 2.2e-11 74.7 151 43.0
Duzib068G0600 Durio zibethinus HOM05D003548 ORTHO05D004066 4.9e-11 73.6 153 40.5
Duzib084G0464 Durio zibethinus HOM05D003548 ORTHO05D004066 4.9e-11 73.6 149 41.6
Potri.001G097200 Populus trichocarpa HOM05D003548 ORTHO05D004066 4.9e-11 73.6 150 38.7
DCAR_008526 Daucus carota HOM05D003548 ORTHO05D004066 6.4e-11 73.2 143 37.8
CANSAT21G0595 Cannabis sativa HOM05D003548 ORTHO05D004066 1.1e-10 72.4 153 41.8
Dinv37570 Davidia involucrata HOM05D003548 ORTHO05D004066 1.1e-10 72.4 157 35.7
Cc08_g15520 Coffea canephora HOM05D003548 ORTHO05D004066 1.4e-10 72.0 153 37.9
Lj4g0009292 Lotus japonicus HOM05D003548 ORTHO05D004066 1.9e-10 71.6 147 38.1
Potri.003G134200 Populus trichocarpa HOM05D003548 ORTHO05D004066 1.9e-10 71.6 157 38.2
QL02p032544 Quercus lobata HOM05D003548 ORTHO05D004066 1.9e-10 71.6 141 41.1
Sed0010954 Sechium edule HOM05D003548 ORTHO05D004066 1.9e-10 71.6 152 36.8
CiPaw.12G087100 Carya illinoinensis HOM05D003548 ORTHO05D004066 2.4e-10 71.2 145 40.0
Haze_08718 Corylus avellana HOM05D003548 ORTHO05D004066 2.4e-10 71.2 153 42.5
Gorai.006G208300 Gossypium raimondii HOM05D003548 ORTHO05D004066 2.4e-10 71.2 151 41.7
Gohir.D09G185600 Gossypium hirsutum HOM05D003548 ORTHO05D004066 3.2e-10 70.9 151 41.1
Gohir.A09G191100 Gossypium hirsutum HOM05D003548 ORTHO05D004066 4.1e-10 70.5 152 40.8
Cfa012267 Carpinus fangiana HOM05D003548 ORTHO05D004066 5.4e-10 70.1 153 42.5
ClCG01G002150 Citrullus lanatus HOM05D003548 ORTHO05D004066 5.4e-10 70.1 153 38.6
MD06G1096100 Malus domestica HOM05D003548 ORTHO05D004066 7.1e-10 69.7 152 38.8
Atru.chr9.2080 Acer truncatum HOM05D003548 ORTHO05D004066 1.2e-09 68.9 153 36.6
Gohir.A02G103700 Gossypium hirsutum HOM05D003548 ORTHO05D004066 1.2e-09 68.9 158 41.8
Gohir.D03G080300 Gossypium hirsutum HOM05D003548 ORTHO05D004066 1.2e-09 68.9 150 42.7
Sabra01G0072500 Salix brachista HOM05D003548 ORTHO05D004066 1.2e-09 68.9 151 40.4
Peaxi162Scf00074g00156 Petunia axillaris HOM05D003548 ORTHO05D004066 1.6e-09 68.6 154 37.7
DCAR_006852 Daucus carota HOM05D003548 ORTHO05D004066 2.1e-09 68.2 143 35.7
Hma1.2p1_0216F.1_g091270 Hydrangea macrophylla HOM05D003548 ORTHO05D004066 2.7e-09 67.8 156 35.9
Lalb_Chr16g0390341 Lupinus albus HOM05D003548 ORTHO05D004066 2.7e-09 67.8 150 36.0
TWI15G1126 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 2.7e-09 67.8 152 36.8
Glyma.05G213300 Glycine max HOM05D003548 ORTHO05D004066 4.6e-09 67.0 146 38.4
Glyma.08G019800 Glycine max HOM05D003548 ORTHO05D004066 7.8e-09 66.2 147 38.8
Gorai.003G083700 Gossypium raimondii HOM05D003548 ORTHO05D004066 7.8e-09 66.2 150 42.7
Medtr8g099105 Medicago truncatula HOM05D003548 ORTHO05D004066 7.8e-09 66.2 147 38.1
Phvul.002G294600 Phaseolus vulgaris HOM05D003548 ORTHO05D004066 7.8e-09 66.2 148 37.8
Sed0003878 Sechium edule HOM05D003548 ORTHO05D004066 1.3e-08 65.5 152 35.5
CSS0041240 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 1.7e-08 65.1 155 34.8
CSS0049608 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 1.7e-08 65.1 155 34.8
MELO3C005727.2 Cucumis melo HOM05D003548 ORTHO05D004066 1.7e-08 65.1 152 36.8
CsaV3_5G002270 Cucumis sativus L. HOM05D003548 ORTHO05D004066 1.7e-08 65.1 153 35.9
TWI81G0889 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 1.7e-08 65.1 157 40.1
GSVIVG01019448001 Vitis vinifera HOM05D003548 ORTHO05D004066 1.7e-08 65.1 153 36.6
Eucgr.D01792 Eucalyptus grandis HOM05D003548 ORTHO05D004066 2.3e-08 64.7 140 37.9
Cc02_g02080 Coffea canephora HOM05D003548 ORTHO05D004066 3.0e-08 64.3 150 38.0
arahy.Tifrunner.gnm1.ann1.59PT6M Arachis hypogaea HOM05D003548 ORTHO05D004066 5.1e-08 63.5 151 37.1
VMungo0251G1700 Vigna mungo HOM05D003548 ORTHO05D004066 5.1e-08 63.5 147 38.1
Ciclev10019140m.g Citrus clementina HOM05D003548 ORTHO05D004066 6.6e-08 63.2 150 37.3
Sabra03G0096600 Salix brachista HOM05D003548 ORTHO05D004066 6.6e-08 63.2 152 36.8
PGSC0003DMG400028194 Solanum tuberosum HOM05D003548 ORTHO05D004066 6.6e-08 63.2 156 64.7
Duzib205G0585 Durio zibethinus HOM05D003548 ORTHO05D004066 8.6e-08 62.8 149 37.6
Manes.02G014900 Manihot esculenta HOM05D003548 ORTHO05D004066 8.6e-08 62.8 139 38.8
Prupe.5G110700 Prunus persica HOM05D003548 ORTHO05D004066 8.6e-08 62.8 153 34.6
CAN.G532.68 Capsicum annuum HOM05D003548 ORTHO05D004066 1.1e-07 62.4 154 37.0
MBI06_g29318_MAGBIO Magnolia biondii HOM05D003548 ORTHO05D004066 2.5e-07 61.2 149 34.9
FvH4_5g03650 Fragaria vesca HOM05D003548 ORTHO05D004066 3.3e-07 60.8 63 54.0
Glyma.01G223400 Glycine max HOM05D003548 ORTHO05D004066 3.3e-07 60.8 143 35.7
Nitab4.5_0000966g0040 Nicotiana tabacum HOM05D000302 ORTHO05D000334 3.3e-07 60.8 107 57.9
Oeu042375.2 Olea europaea HOM05D003548 ORTHO05D004066 3.3e-07 60.8 144 34.7
Aqoxy5G04044 Aquilegia oxysepala HOM05D003548 ORTHO05D004066 7.3e-07 59.7 153 35.3
CSS0034195 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 7.3e-07 59.7 101 42.6
Dinv38885 Davidia involucrata HOM05D003548 ORTHO05D004066 7.3e-07 59.7 153 34.0
Migut.F01061 Erythranthe guttata HOM05D003548 ORTHO05D004066 7.3e-07 59.7 149 36.2
FAN13G0102 Fragaria x ananassa HOM05D003548 ORTHO05D004066 9.5e-07 59.3 63 55.6
Sopen08g004030 Solanum pennellii HOM05D003548 ORTHO05D004066 9.5e-07 59.3 159 31.4
TWI60G0243 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 9.5e-07 59.3 151 33.1
Nitab4.5_0007898g0040 Nicotiana tabacum HOM05D000302 ORTHO05D000334 1.2e-06 58.9 57 54.4
Peaxi162Scf00102g01614 Petunia axillaris HOM05D003548 ORTHO05D004066 1.2e-06 58.9 157 35.0
arahy.Tifrunner.gnm1.ann1.36D870 Arachis hypogaea HOM05D003548 ORTHO05D004066 2.1e-06 58.2 151 38.4
ECA246G0635 Erigeron canadensis HOM05D003548 ORTHO05D004066 2.1e-06 58.2 133 39.1
Sc13g0009440 Simmondsia chinensis HOM05D003548 ORTHO05D004066 2.1e-06 58.2 136 33.1
Hma1.2p1_0142F.1_g064160 Hydrangea macrophylla HOM05D003548 ORTHO05D004066 2.8e-06 57.8 146 33.6
PGSC0003DMG400005830 Solanum tuberosum HOM05D003548 ORTHO05D004066 2.8e-06 57.8 149 31.5
Actinidia08610 Actinidia chinensis HOM05D003548 ORTHO05D004066 3.6e-06 57.4 155 31.0
Nn1g01756 Nelumbo nucifera HOM05D003548 ORTHO05D004066 3.6e-06 57.4 162 31.5
PGR031G0552 Punica granatum HOM05D003548 ORTHO05D004066 4.7e-06 57.0 137 32.8
Solyc08g008180.3 Solanum lycopersicum HOM05D003548 ORTHO05D004066 4.7e-06 57.0 151 32.5
HanXRQChr09g0253141 Helianthus annuus HOM05D003548 ORTHO05D004066 8.1e-06 56.2 140 34.3
TAR636G0920 Trochodendron aralioides HOM05D003548 ORTHO05D004066 8.1e-06 56.2 152 33.6
GSVIVG01028755001 Vitis vinifera HOM05D003548 ORTHO05D004066 8.1e-06 56.2 156 33.3


User provided reference genes

Program Settings