Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11359 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 2.0e-104 382.5 202 100.0
vmacro11465 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 2.0e-104 382.5 202 100.0
vmacro11467 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 1.2e-75 287.0 202 77.7
Rhsim02G0244100 Rhododendron simsii HOM05D003962 ORTHO05D004714 3.4e-75 285.4 202 74.3
Rhsim02G0244200 Rhododendron simsii HOM05D003962 ORTHO05D004714 4.0e-60 235.3 276 52.5
Actinidia04199 Actinidia chinensis HOM05D003962 ORTHO05D004714 1.5e-54 216.9 200 58.5
vmacro11361 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 8.1e-53 211.1 187 64.7
CSS0016674 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 1.9e-46 189.9 204 54.4
CSS0043367 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 1.9e-46 189.9 204 54.4
Actinidia22731 Actinidia chinensis HOM05D003962 ORTHO05D004714 2.4e-44 183.0 200 53.5
Actinidia27315 Actinidia chinensis HOM05D003962 ORTHO05D004714 3.1e-44 182.6 204 52.9
CSS0006905 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 3.4e-43 179.1 171 59.6
Dinv37529 Davidia involucrata HOM05D003962 ORTHO05D004714 2.5e-38 162.9 215 46.5
Dinv38828 Davidia involucrata HOM05D003962 ORTHO05D004714 3.1e-36 156.0 165 52.1
Hma1.2p1_0359F.1_g135210 Hydrangea macrophylla HOM05D003962 ORTHO05D004714 6.9e-28 128.3 206 41.3
GSVIVG01019537001 Vitis vinifera HOM05D003962 ORTHO05D005685 1.8e-23 113.6 198 38.9
TAR374G0911 Trochodendron aralioides HOM05D003962 ORTHO05D004714 3.0e-23 112.8 142 44.4
Cc08_g16110 Coffea canephora HOM05D003962 ORTHO05D004714 9.6e-22 107.8 203 35.5
Lj2A167T45 Lonicera japonica HOM05D003962 ORTHO05D004714 3.8e-18 95.9 184 34.2
Nitab4.5_0006775g0080 Nicotiana tabacum HOM05D003962 ORTHO05D004714 1.1e-17 94.4 148 39.2
Nitab4.5_0001210g0080 Nicotiana tabacum HOM05D003962 ORTHO05D004714 5.5e-17 92.0 148 39.9
Migut.A00639 Erythranthe guttata HOM05D003962 ORTHO05D004714 7.1e-17 91.7 202 31.7
MSTRG.25678 Avicennia marina HOM05D003962 ORTHO05D004714 3.5e-16 89.4 200 33.0
Oeu054025.1 Olea europaea HOM05D003962 ORTHO05D004714 6.0e-16 88.6 153 35.9
HanXRQChr06g0166431 Helianthus annuus HOM05D003962 ORTHO05D004714 1.3e-15 87.4 143 38.5
TAR375G1139 Trochodendron aralioides HOM05D003962 ORTHO05D004714 2.3e-15 86.7 146 37.7
MSTRG.13886 Avicennia marina HOM05D003962 ORTHO05D004714 3.0e-15 86.3 150 35.3
Nitab4.5_0007367g0070 Nicotiana tabacum HOM05D003962 ORTHO05D004714 3.0e-15 86.3 146 35.6
DCAR_029893 Daucus carota HOM05D003962 ORTHO05D004714 6.7e-15 85.1 153 38.6
Oeu063516.1 Olea europaea HOM05D003962 ORTHO05D004714 8.7e-15 84.7 145 36.6
QL09p009481 Quercus lobata HOM05D003962 ORTHO05D004714 1.9e-14 83.6 161 33.5
Nitab4.5_0002944g0030 Nicotiana tabacum HOM05D003962 ORTHO05D004714 2.5e-14 83.2 146 34.9
Prupe.5G120600 Prunus persica HOM05D003962 ORTHO05D004714 5.7e-14 82.0 141 37.6
TAR629G3347 Trochodendron aralioides HOM05D003962 ORTHO05D004714 5.7e-14 82.0 144 37.5
Peaxi162Scf00074g00821 Petunia axillaris HOM05D003962 ORTHO05D004714 1.6e-13 80.5 213 31.9
PSO384G0521 Papaver somniferum HOM05D003962 ORTHO05D004714 2.8e-13 79.7 141 38.3
PSO135G0074 Papaver somniferum HOM05D003962 ORTHO05D004714 4.8e-13 79.0 141 38.3
PGSC0003DMG400012278 Solanum tuberosum HOM05D003962 ORTHO05D004714 4.8e-13 79.0 147 37.4
Cfa016250 Carpinus fangiana HOM05D003962 ORTHO05D004714 1.8e-12 77.0 186 28.5
CAN.G1804.9 Capsicum annuum HOM05D003962 ORTHO05D004714 5.3e-12 75.5 138 37.0
Haze_00190 Corylus avellana HOM05D003962 ORTHO05D004714 5.3e-12 75.5 186 28.5
Lalb_Chr23g0271551 Lupinus albus HOM05D003962 ORTHO05D004714 6.9e-12 75.1 106 40.6
Potri.015G014800 Populus trichocarpa HOM05D003962 ORTHO05D004714 1.2e-11 74.3 144 31.9
CiPaw.05G251700 Carya illinoinensis HOM05D003962 ORTHO05D004714 1.5e-11 73.9 142 33.1
SalBow1G2835 Salvia bowleyana HOM05D003962 ORTHO05D004714 1.5e-11 73.9 202 30.2
SalBow1G4038 Salvia bowleyana HOM05D003962 ORTHO05D004714 1.5e-11 73.9 202 30.2
ECA233G2741 Erigeron canadensis HOM05D003962 ORTHO05D004714 2.0e-11 73.6 97 43.3
Ciclev10004179m.g Citrus clementina HOM05D003962 ORTHO05D004714 3.4e-11 72.8 148 32.4
ECA246G1296 Erigeron canadensis HOM05D003962 ORTHO05D004714 3.4e-11 72.8 142 35.9
Prupe.2G311300 Prunus persica HOM05D003962 ORTHO05D004714 4.5e-11 72.4 134 38.1
HanXRQChr17g0534811 Helianthus annuus HOM05D003962 ORTHO05D004714 7.6e-11 71.6 177 30.5
TWI39G0414 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 1.3e-10 70.9 149 32.9
Eucgr.A01465 Eucalyptus grandis HOM05D003962 ORTHO05D004714 6.5e-10 68.6 146 32.2
Oeu009961.1 Olea europaea HOM05D003962 ORTHO05D004714 6.5e-10 68.6 195 32.3
Solyc08g082410.4 Solanum lycopersicum HOM05D003962 ORTHO05D004714 6.5e-10 68.6 147 36.1
SGA_v2.0_scaffold305G47981 Striga asiatica HOM05D003962 ORTHO05D004714 6.5e-10 68.6 216 33.3
TAR636G0021 Trochodendron aralioides HOM05D003962 ORTHO05D004714 8.4e-10 68.2 144 35.4
RcHm_v2.0_Chr1g0380961 Rosa chinensis HOM05D003962 ORTHO05D004714 1.1e-09 67.8 175 29.7
Sabra15G0011900 Salix brachista HOM05D003962 ORTHO05D004714 1.4e-09 67.4 140 30.7
TWI14G0330 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 1.4e-09 67.4 168 32.1
Nn1g01866 Nelumbo nucifera HOM05D003962 ORTHO05D004714 3.2e-09 66.2 148 33.8
Potri.012G013800 Populus trichocarpa HOM05D003962 ORTHO05D004714 3.2e-09 66.2 151 31.1
Sed0023111 Sechium edule HOM05D003962 ORTHO05D004714 3.2e-09 66.2 154 33.1
HanXRQChr07g0190851 Helianthus annuus HOM05D003962 ORTHO05D004714 5.5e-09 65.5 100 42.0
Sabra12G0018000 Salix brachista HOM05D003962 ORTHO05D004714 5.5e-09 65.5 151 30.5
arahy.Tifrunner.gnm1.ann1.897SEY Arachis hypogaea HOM05D003962 ORTHO05D004714 9.3e-09 64.7 155 32.9
arahy.Tifrunner.gnm1.ann1.JYM9I0 Arachis hypogaea HOM05D003962 ORTHO05D004714 9.3e-09 64.7 155 32.9
Sc19g0000840 Simmondsia chinensis HOM05D003962 ORTHO05D004714 9.3e-09 64.7 154 30.5
unitig_0.g2843 Utricularia gibba HOM05D047057 ORTHO05D004714 9.3e-09 64.7 81 44.4
MELO3C005882.2 Cucumis melo HOM05D003962 ORTHO05D004714 1.2e-08 64.3 136 33.1
Duzib205G1416 Durio zibethinus HOM05D003962 ORTHO05D004714 2.1e-08 63.5 190 28.9
FAN10G2253 Fragaria x ananassa HOM05D003962 ORTHO05D004714 2.1e-08 63.5 160 32.5
Gorai.007G015000 Gossypium raimondii HOM05D003962 ORTHO05D004714 2.1e-08 63.5 158 30.4
Thecc.03G196300 Theobroma cacao HOM05D003962 ORTHO05D004714 2.1e-08 63.5 205 26.8
GSVIVG01038709001 Vitis vinifera HOM05D003962 ORTHO05D004714 2.1e-08 63.5 165 27.3
Lalb_Chr11g0066791 Lupinus albus HOM05D003962 ORTHO05D004714 2.7e-08 63.2 135 34.8
MD01G1219900 Malus domestica HOM05D003962 ORTHO05D004714 2.7e-08 63.2 143 32.2
ClCG01G000470 Citrullus lanatus HOM05D003962 ORTHO05D004714 3.5e-08 62.8 116 34.5
Duzib205G1946 Durio zibethinus HOM05D003962 ORTHO05D004714 4.6e-08 62.4 190 28.9
Gohir.A11G014500 Gossypium hirsutum HOM05D003962 ORTHO05D004714 6.1e-08 62.0 170 29.4
Glyma.06G127600 Glycine max HOM05D003962 ORTHO05D004714 7.9e-08 61.6 133 32.3
MBI07_g07101_MAGBIO Magnolia biondii HOM05D003962 ORTHO05D004714 7.9e-08 61.6 139 30.2
FvH4_7g31740 Fragaria vesca HOM05D003962 ORTHO05D004714 1.0e-07 61.2 181 30.4
FAN10G3613 Fragaria x ananassa HOM05D003962 ORTHO05D004714 1.0e-07 61.2 152 31.6
CsaV3_5G000540 Cucumis sativus L. HOM05D003962 ORTHO05D004714 1.3e-07 60.8 156 30.1
CANSAT21G2091 Cannabis sativa HOM05D003962 ORTHO05D004714 2.3e-07 60.1 96 36.5
Gohir.D11G014700 Gossypium hirsutum HOM05D003962 ORTHO05D004714 2.3e-07 60.1 190 28.4
Lalb_Chr08g0240331 Lupinus albus HOM05D003962 ORTHO05D004714 2.3e-07 60.1 137 32.8
Psat5g078120 Pisum sativum HOM05D003962 ORTHO05D004714 2.3e-07 60.1 162 30.9
TWI23G0430 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 2.3e-07 60.1 146 30.8
MD07G1290200 Malus domestica HOM05D003962 ORTHO05D004714 3.0e-07 59.7 176 33.0
FAN06G4230 Fragaria x ananassa HOM05D003962 ORTHO05D004714 3.9e-07 59.3 155 31.0
Glyma.04G236700 Glycine max HOM05D003962 ORTHO05D004714 3.9e-07 59.3 100 36.0
Gohir.D11G014600 Gossypium hirsutum HOM05D003962 ORTHO05D004714 3.9e-07 59.3 176 28.4
PGR042G1008 Punica granatum HOM05D003962 ORTHO05D004714 3.9e-07 59.3 89 37.1
COL.COLO4_11264 Corchorus olitorius HOM05D003962 ORTHO05D004714 5.1e-07 58.9 143 31.5
FAN06G4429 Fragaria x ananassa HOM05D003962 ORTHO05D004714 5.1e-07 58.9 163 29.4
Atru.chr1.164 Acer truncatum HOM05D003962 ORTHO05D004714 6.7e-07 58.5 133 31.6
Sed0017272 Sechium edule HOM05D003962 ORTHO05D004714 6.7e-07 58.5 85 38.8
DCAR_006489 Daucus carota HOM05D003962 ORTHO05D004714 8.7e-07 58.2 153 35.3
VMungo1309G1284 Vigna mungo HOM05D003962 ORTHO05D004714 1.1e-06 57.8 135 34.1
Lj1g0008504 Lotus japonicus HOM05D003962 ORTHO05D004714 1.5e-06 57.4 152 32.9
Ca_16697_v3 Cicer arietinum L. HOM05D003962 ORTHO05D004714 1.9e-06 57.0 154 31.8
Manes.06G159800 Manihot esculenta HOM05D003962 ORTHO05D004714 2.5e-06 56.6 214 26.6
Manes.14G006600 Manihot esculenta HOM05D003962 ORTHO05D004714 2.5e-06 56.6 141 29.8
FAN03G1461 Fragaria x ananassa HOM05D003962 ORTHO05D004714 3.3e-06 56.2 102 35.3
Aa31sc139G70 Aethionema arabicum HOM05D003962 ORTHO05D004714 4.3e-06 55.8 87 39.1
Sc25g0000880 Simmondsia chinensis HOM05D003962 ORTHO05D004714 4.3e-06 55.8 148 29.7
AUR62006109 Chenopodium quinoa HOM05D003962 ORTHO05D004714 5.7e-06 55.5 97 37.1
FAN01G0781 Fragaria x ananassa HOM05D003962 ORTHO05D004714 5.7e-06 55.5 102 35.3
Gohir.A11G014600 Gossypium hirsutum HOM05D003962 ORTHO05D004714 5.7e-06 55.5 193 27.5
Aqoxy7G00097 Aquilegia oxysepala HOM05D003962 ORTHO05D004714 9.7e-06 54.7 143 30.1
TPR.G17287 Trifolium pratense HOM05D003962 ORTHO05D004714 9.7e-06 54.7 138 31.2


User provided reference genes

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