Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11353 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 5.6e-89 330.9 161 100.0
vmacro11261 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 6.9e-55 217.6 155 74.8
vmacro11357 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 7.1e-52 207.6 168 67.3
vmacro11183 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 2.5e-36 156.0 221 48.4
CSS0040129 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 5.1e-34 148.3 216 45.4
CSS0014408 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 1.3e-32 143.7 222 45.0
CSS0019364 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 1.3e-32 143.7 222 45.0
Rhsim02G0202500 Rhododendron simsii HOM05D003337 ORTHO05D003808 1.3e-32 143.7 223 46.2
FAN20G0291 Fragaria x ananassa HOM05D003337 ORTHO05D003808 3.1e-31 139.0 214 44.9
COL.COLO4_18879 Corchorus olitorius HOM05D003337 ORTHO05D003808 1.2e-30 137.1 215 43.3
QL02p021300 Quercus lobata HOM05D003337 ORTHO05D003808 1.5e-30 136.7 215 43.3
Haze_21497 Corylus avellana HOM05D003337 ORTHO05D003808 2.0e-30 136.3 243 40.7
FvH4_2g28850 Fragaria vesca HOM05D003337 ORTHO05D003808 2.0e-30 136.3 221 43.4
FAN24G1139 Fragaria x ananassa HOM05D003337 ORTHO05D003808 2.0e-30 136.3 221 43.4
FAN27G2849 Fragaria x ananassa HOM05D003337 ORTHO05D003808 3.4e-30 135.6 221 43.4
Actinidia14594 Actinidia chinensis HOM05D003337 ORTHO05D003808 4.5e-30 135.2 223 43.9
GSVIVG01035878001 Vitis vinifera HOM05D003337 ORTHO05D003808 4.5e-30 135.2 223 42.2
Sabra06G0200600 Salix brachista HOM05D003337 ORTHO05D003808 5.9e-30 134.8 216 43.5
CiPaw.07G224800 Carya illinoinensis HOM05D003337 ORTHO05D003808 7.6e-30 134.4 215 43.7
FAN15G2120 Fragaria x ananassa HOM05D003337 ORTHO05D003808 7.6e-30 134.4 221 43.0
Gohir.A05G055800 Gossypium hirsutum HOM05D003337 ORTHO05D003808 7.6e-30 134.4 215 42.8
RcHm_v2.0_Chr6g0297611 Rosa chinensis HOM05D003337 ORTHO05D003808 1.0e-29 134.0 221 43.0
Thecc.09G022400 Theobroma cacao HOM05D003337 ORTHO05D003808 1.0e-29 134.0 216 43.1
Prupe.1G482800 Prunus persica HOM05D003337 ORTHO05D003808 1.7e-29 133.3 222 42.3
Migut.A00028 Erythranthe guttata HOM05D003337 ORTHO05D003808 2.2e-29 132.9 216 41.2
Atru.chr7.2458 Acer truncatum HOM05D003337 ORTHO05D003808 2.9e-29 132.5 216 42.1
Cpa.g.sc217.15 Carica papaya HOM05D003337 ORTHO05D003808 2.9e-29 132.5 223 42.2
Gohir.D05G058000 Gossypium hirsutum HOM05D003337 ORTHO05D003808 2.9e-29 132.5 215 41.9
Gorai.009G059000 Gossypium raimondii HOM05D003337 ORTHO05D003808 2.9e-29 132.5 218 42.2
Nitab4.5_0004664g0060 Nicotiana tabacum HOM05D003337 ORTHO05D003808 2.9e-29 132.5 203 43.8
HanXRQChr05g0134851 Helianthus annuus HOM05D003337 ORTHO05D003808 3.8e-29 132.1 197 45.2
MSTRG.26016 Avicennia marina HOM05D003337 ORTHO05D003808 5.0e-29 131.7 216 42.1
CiPaw.08G010200 Carya illinoinensis HOM05D003337 ORTHO05D003808 5.0e-29 131.7 215 42.8
Lj7C724G9 Lonicera japonica HOM05D003337 ORTHO05D003808 5.0e-29 131.7 216 44.4
Sopen06g008090 Solanum pennellii HOM05D003337 ORTHO05D003808 5.0e-29 131.7 223 40.8
SGA_v2.0_scaffold64G21955 Striga asiatica HOM05D003337 ORTHO05D003808 5.0e-29 131.7 218 42.7
Dinv18205 Davidia involucrata HOM05D003337 ORTHO05D003808 6.5e-29 131.3 216 42.6
Gohir.D05G057900 Gossypium hirsutum HOM05D003337 ORTHO05D003808 8.5e-29 131.0 218 41.7
CAN.G130.8 Capsicum annuum HOM05D003337 ORTHO05D003808 1.1e-28 130.6 220 40.9
MD08G1156500 Malus domestica HOM05D003337 ORTHO05D003808 1.1e-28 130.6 215 43.3
Gohir.A05G055900 Gossypium hirsutum HOM05D003337 ORTHO05D003808 1.4e-28 130.2 214 41.6
Manes.16G123500 Manihot esculenta HOM05D003337 ORTHO05D003808 1.4e-28 130.2 216 43.1
Nn2g12124 Nelumbo nucifera HOM05D003337 ORTHO05D003808 1.4e-28 130.2 223 42.2
Duzib168G1956 Durio zibethinus HOM05D003337 ORTHO05D003808 1.9e-28 129.8 220 43.2
Sc09g0010250 Simmondsia chinensis HOM05D003337 ORTHO05D003808 1.9e-28 129.8 219 42.9
TAR625G0257 Trochodendron aralioides HOM05D003337 ORTHO05D003808 2.5e-28 129.4 224 42.4
Sabra18G0028200 Salix brachista HOM05D003337 ORTHO05D003808 3.2e-28 129.0 216 41.7
Duzib187G1394 Durio zibethinus HOM05D003337 ORTHO05D003808 7.2e-28 127.9 223 39.9
ECA246G2127 Erigeron canadensis HOM05D003337 ORTHO05D003808 7.2e-28 127.9 215 42.8
Gorai.009G059100 Gossypium raimondii HOM05D003337 ORTHO05D003808 7.2e-28 127.9 215 40.9
Medtr3g106700 Medicago truncatula HOM05D003337 ORTHO05D003808 7.2e-28 127.9 215 41.4
Dinv05003 Davidia involucrata HOM05D003337 ORTHO05D003808 1.2e-27 127.1 194 43.3
Hma1.2p1_0243F.1_g101010 Hydrangea macrophylla HOM05D003337 ORTHO05D003808 1.2e-27 127.1 205 42.4
Hma1.2p1_2800F.1_g328770 Hydrangea macrophylla HOM05D003337 ORTHO05D003808 1.2e-27 127.1 205 42.4
TAR383G0794 Trochodendron aralioides HOM05D003337 ORTHO05D003808 1.2e-27 127.1 224 42.4
Cc08_g00460 Coffea canephora HOM05D003337 ORTHO05D003808 1.6e-27 126.7 223 40.4
Phvul.009G091900 Phaseolus vulgaris HOM05D003337 ORTHO05D003808 2.1e-27 126.3 222 40.5
EL10Ac2g04195 Beta vulgaris HOM05D003337 ORTHO05D003808 2.7e-27 125.9 221 40.3
VMungo1309G0140 Vigna mungo HOM05D003337 ORTHO05D003808 2.7e-27 125.9 222 40.5
arahy.Tifrunner.gnm1.ann1.C340QI Arachis hypogaea HOM05D003337 ORTHO05D003808 3.6e-27 125.6 222 40.5
Glyma.04G065500 Glycine max HOM05D003337 ORTHO05D003808 3.6e-27 125.6 216 42.6
Glyma.06G066900 Glycine max HOM05D003337 ORTHO05D003808 3.6e-27 125.6 216 42.6
Oeu053108.1 Olea europaea HOM05D003337 ORTHO05D003808 3.6e-27 125.6 216 42.1
Aqoxy7G02409 Aquilegia oxysepala HOM05D003337 ORTHO05D003808 4.6e-27 125.2 222 41.9
arahy.Tifrunner.gnm1.ann1.EV8XFE Arachis hypogaea HOM05D003337 ORTHO05D003808 4.6e-27 125.2 222 40.5
MD15G1127100 Malus domestica HOM05D003337 ORTHO05D003808 6.1e-27 124.8 215 41.4
MBI14_g37827_MAGBIO Magnolia biondii HOM05D003337 ORTHO05D003808 7.9e-27 124.4 224 42.0
PGR031G1540 Punica granatum HOM05D003337 ORTHO05D003808 7.9e-27 124.4 213 41.3
Psat5g029560 Pisum sativum HOM05D003337 ORTHO05D003808 1.0e-26 124.0 215 40.5
Hund25887 Selenicereus undatus HOM05D003337 ORTHO05D003808 1.0e-26 124.0 212 41.5
Potri.006G256400 Populus trichocarpa HOM05D003337 ORTHO05D003808 1.3e-26 123.6 216 39.4
ClCG05G016760 Citrullus lanatus HOM05D003337 ORTHO05D003808 2.3e-26 122.9 218 41.3
Ciclev10007238m.g Citrus clementina HOM05D003337 ORTHO05D003808 2.3e-26 122.9 223 40.4
MELO3C003713.2 Cucumis melo HOM05D003337 ORTHO05D003808 2.3e-26 122.9 218 41.3
CsaV3_3G046270 Cucumis sativus L. HOM05D003337 ORTHO05D003808 2.3e-26 122.9 218 41.7
AUR62012417 Chenopodium quinoa HOM05D003337 ORTHO05D003808 3.0e-26 122.5 222 39.6
DCAR_001543 Daucus carota HOM05D003337 ORTHO05D003808 3.0e-26 122.5 215 40.0
Nitab4.5_0002042g0010 Nicotiana tabacum HOM05D003337 ORTHO05D003808 3.0e-26 122.5 215 40.9
Potri.018G025600 Populus trichocarpa HOM05D003337 ORTHO05D003808 3.0e-26 122.5 220 40.0
Lj1g0009523 Lotus japonicus HOM05D003337 ORTHO05D003808 5.1e-26 121.7 222 40.1
Nn8g39563 Nelumbo nucifera HOM05D003337 ORTHO05D003808 6.7e-26 121.3 224 41.5
TWI32G1054 Tripterygium wilfordii HOM05D003337 ORTHO05D003808 6.7e-26 121.3 223 40.8
TWI34G0528 Tripterygium wilfordii HOM05D003337 ORTHO05D003808 6.7e-26 121.3 223 39.5
Manes.03G013300 Manihot esculenta HOM05D003337 ORTHO05D003808 8.8e-26 120.9 216 40.7
Ah.16g104580 Amaranthus hybridus HOM05D003337 ORTHO05D003808 1.5e-25 120.2 223 39.0
AUR62031541 Chenopodium quinoa HOM05D003337 ORTHO05D003808 1.5e-25 120.2 222 37.8
SalBow4G0163 Salvia bowleyana HOM05D003337 ORTHO05D003808 1.5e-25 120.2 216 41.2
TPR.G3117 Trifolium pratense HOM05D003337 ORTHO05D003808 1.5e-25 120.2 215 41.9
Sed0024031 Sechium edule HOM05D003337 ORTHO05D003808 2.5e-25 119.4 220 38.6
Nitab4.5_0000165g0080 Nicotiana tabacum HOM05D003337 ORTHO05D003808 3.3e-25 119.0 224 37.9
Peaxi162Scf00136g02012 Petunia axillaris HOM05D003337 ORTHO05D003808 3.3e-25 119.0 216 39.8
Lalb_Chr11g0063671 Lupinus albus HOM05D003337 ORTHO05D003808 4.3e-25 118.6 215 39.5
Lalb_Chr08g0244191 Lupinus albus HOM05D003337 ORTHO05D003808 5.7e-25 118.2 215 39.1
Sed0015158 Sechium edule HOM05D003337 ORTHO05D003808 7.4e-25 117.9 218 40.4
Nitab4.5_0001294g0060 Nicotiana tabacum HOM05D003337 ORTHO05D003808 1.3e-24 117.1 224 37.5
unitig_748.g8275 Utricularia gibba HOM05D003337 ORTHO05D003808 2.2e-24 116.3 215 38.1
PSO017G4016 Papaver somniferum HOM05D003337 ORTHO05D003808 3.7e-24 115.5 218 39.9
PSO170G2416 Papaver somniferum HOM05D003337 ORTHO05D003808 3.7e-24 115.5 219 39.7
TAR636G2033 Trochodendron aralioides HOM05D003337 ORTHO05D003808 3.7e-24 115.5 214 40.2
Eucgr.C01723 Eucalyptus grandis HOM05D003337 ORTHO05D003808 4.8e-24 115.2 219 38.4
Lalb_Chr23g0268451 Lupinus albus HOM05D003337 ORTHO05D003808 6.3e-24 114.8 215 37.7
Aa31sc102G10 Aethionema arabicum HOM05D003337 ORTHO05D003808 3.1e-23 112.5 213 38.5
CDE02G1979 Ceratophyllum demersum HOM05D003337 ORTHO05D003808 6.9e-23 111.3 213 36.2
Lsat_1_v5_gn_5_30121 Lactuca sativa HOM05D003337 ORTHO05D003808 6.9e-23 111.3 217 40.6
AT2G25320 Arabidopsis thaliana HOM05D003337 ORTHO05D003808 2.0e-22 109.8 217 38.2
Thhalv10000009m.g Eutrema salsugineum HOM05D003337 ORTHO05D003808 2.0e-22 109.8 221 38.5
AL4G16700 Arabidopsis lyrata HOM05D003337 ORTHO05D003808 2.6e-22 109.4 220 37.7
BcaB08g35177 Brassica carinata HOM05D003337 ORTHO05D003808 2.6e-22 109.4 215 39.5
Carub.0004s0499 Capsella rubella HOM05D003337 ORTHO05D003808 2.6e-22 109.4 217 38.2
A09p55690 Brassica napus HOM05D003337 ORTHO05D003808 4.5e-22 108.6 215 39.1
BraA09t40970Z Brassica rapa HOM05D003337 ORTHO05D003808 4.5e-22 108.6 215 39.1
Sp4g04460 Schrenkiella parvula HOM05D003337 ORTHO05D003808 4.5e-22 108.6 221 38.0
BcaC02g08354 Brassica carinata HOM05D003337 ORTHO05D003808 7.7e-22 107.8 221 39.4
C04p55320 Brassica napus HOM05D003337 ORTHO05D003808 1.0e-21 107.5 214 37.4
BolC4t27068H Brassica oleracea HOM05D003337 ORTHO05D003808 1.0e-21 107.5 221 38.0
BcaB06g28056 Brassica carinata HOM05D003337 ORTHO05D003808 1.3e-21 107.1 214 39.7
BcaC07g40870 Brassica carinata HOM05D003337 ORTHO05D003808 1.7e-21 106.7 215 39.1
BolC8t51439H Brassica oleracea HOM05D003337 ORTHO05D003808 1.7e-21 106.7 215 39.1
CARHR116200 Cardamine hirsuta HOM05D003337 ORTHO05D003808 2.2e-21 106.3 220 36.4
A04p19680 Brassica napus HOM05D003337 ORTHO05D003808 3.8e-21 105.5 221 37.1
C08p38690 Brassica napus HOM05D003337 ORTHO05D003808 3.8e-21 105.5 215 38.6
SEGI_13524 Sequoiadendron giganteum HOM05D003337 ORTHO05D003808 6.5e-21 104.8 216 39.8
BraA04t17558Z Brassica rapa HOM05D003337 ORTHO05D003808 1.9e-20 103.2 221 36.7
SHI18538 Sapria himalayana HOM05D003337 ORTHO05D003808 4.2e-20 102.1 230 34.3
HPP92_015261 Vanilla planifolia HOM05D003337 ORTHO05D003808 9.4e-20 100.9 219 37.0
AagrBONN_evm.TU.Sc2ySwM_344.2463 Anthoceros agrestis HOM05D003337 ORTHO05D003808 2.7e-19 99.4 225 35.6
CDE05G2189 Ceratophyllum demersum HOM05D003337 ORTHO05D003808 3.6e-19 99.0 203 36.5
Mapoly0008s0250 Marchantia polymorpha HOM05D003337 ORTHO05D003808 8.2e-16 87.8 232 33.6
Zm00001eb184600 Zea mays HOM05D003337 ORTHO05D003808 3.1e-15 85.9 215 32.6
Solyc06g017970.4 Solanum lycopersicum HOM05D003337 ORTHO05D003808 4.1e-15 85.5 164 35.4
Pp3c2_25380 Physcomitrium patens HOM05D003337 ORTHO05D003808 9.1e-15 84.3 240 33.3
HPP92_010004 Vanilla planifolia HOM05D003337 ORTHO05D003808 1.2e-14 84.0 175 37.7
SMO144G0040 Selaginella moellendorffii HOM05D003337 ORTHO05D003808 2.0e-14 83.2 207 33.3
ATR0739G172 Amborella trichopoda HOM05D003337 ORTHO05D003808 5.9e-14 81.6 272 29.0
CANSAT25G2205 Cannabis sativa HOM05D003337 ORTHO05D003808 1.3e-13 80.5 54 70.4
SEGI_23839 Sequoiadendron giganteum HOM05D003337 ORTHO05D003808 3.2e-12 75.9 224 33.0
SEGI_27956 Sequoiadendron giganteum HOM05D003337 ORTHO05D003808 3.2e-12 75.9 224 33.0
Pp3c2_25350 Physcomitrium patens HOM05D003337 ORTHO05D003808 2.7e-11 72.8 228 32.0
Pp3c2_25330 Physcomitrium patens HOM05D003337 ORTHO05D003808 4.7e-11 72.0 230 31.7
Pp3c1_12560 Physcomitrium patens HOM05D003337 ORTHO05D003808 2.2e-08 63.2 267 26.6
VMungo1215G1977 Vigna mungo HOM05D003337 ORTHO05D003808 4.5e-06 55.5 53 52.8
CBR_g20432 Chara braunii HOM05D003337 ORTHO05D003808 7.7e-06 54.7 31 74.2
VMungo0464G1554 Vigna mungo HOM05D005981 ORTHO05D007551 7.7e-06 54.7 47 55.3


User provided reference genes

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