Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11352 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 8.0e-46 186.8 99 100.0
vmacro11183 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 2.5e-15 85.5 99 55.6
Rhsim02G0202500 Rhododendron simsii HOM05D003337 ORTHO05D003808 1.1e-13 80.1 94 54.3
vmacro11262 Vaccinium macrocarpon HOM05D003337 ORTHO05D426695 1.8e-13 79.3 69 65.2
GSVIVG01035878001 Vitis vinifera HOM05D003337 ORTHO05D003808 5.2e-13 77.8 96 50.0
CAN.G130.8 Capsicum annuum HOM05D003337 ORTHO05D003808 1.2e-12 76.6 100 47.0
Dinv18205 Davidia involucrata HOM05D003337 ORTHO05D003808 2.0e-12 75.9 100 49.0
Dinv05003 Davidia involucrata HOM05D003337 ORTHO05D003808 2.6e-12 75.5 99 50.5
Cc08_g00460 Coffea canephora HOM05D003337 ORTHO05D003808 3.4e-12 75.1 90 54.4
Potri.006G256400 Populus trichocarpa HOM05D003337 ORTHO05D003808 3.4e-12 75.1 100 48.0
Actinidia14594 Actinidia chinensis HOM05D003337 ORTHO05D003808 4.4e-12 74.7 100 45.0
CSS0019364 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 7.5e-12 73.9 93 51.6
CSS0014408 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 9.9e-12 73.6 93 50.5
Hma1.2p1_0243F.1_g101010 Hydrangea macrophylla HOM05D003337 ORTHO05D003808 9.9e-12 73.6 99 48.5
Atru.chr7.2458 Acer truncatum HOM05D003337 ORTHO05D003808 1.3e-11 73.2 96 49.0
CSS0040129 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 1.7e-11 72.8 100 45.0
Ciclev10007238m.g Citrus clementina HOM05D003337 ORTHO05D003808 1.7e-11 72.8 100 47.0
Oeu012290.1 Olea europaea HOM05D003337 ORTHO05D003808 2.2e-11 72.4 90 52.2
Sc09g0010250 Simmondsia chinensis HOM05D003337 ORTHO05D003808 2.2e-11 72.4 98 44.9
ECA246G2127 Erigeron canadensis HOM05D003337 ORTHO05D003808 3.7e-11 71.6 98 48.0
Peaxi162Scf00136g02012 Petunia axillaris HOM05D003337 ORTHO05D003808 3.7e-11 71.6 91 52.7
Potri.018G025600 Populus trichocarpa HOM05D003337 ORTHO05D003808 3.7e-11 71.6 97 50.5
Sabra06G0200600 Salix brachista HOM05D003337 ORTHO05D003808 3.7e-11 71.6 99 48.5
Manes.03G013300 Manihot esculenta HOM05D003337 ORTHO05D003808 4.9e-11 71.2 99 46.5
Nitab4.5_0001294g0060 Nicotiana tabacum HOM05D003337 ORTHO05D003808 4.9e-11 71.2 54 70.4
Hund25887 Selenicereus undatus HOM05D003337 ORTHO05D003808 4.9e-11 71.2 100 45.0
Lsat_1_v5_gn_5_30121 Lactuca sativa HOM05D003337 ORTHO05D003808 6.4e-11 70.9 100 46.0
Oeu053108.1 Olea europaea HOM05D003337 ORTHO05D003808 8.3e-11 70.5 54 68.5
Nitab4.5_0000165g0080 Nicotiana tabacum HOM05D003337 ORTHO05D003808 1.4e-10 69.7 54 68.5
DCAR_001543 Daucus carota HOM05D003337 ORTHO05D003808 1.9e-10 69.3 105 41.0
Duzib168G1956 Durio zibethinus HOM05D003337 ORTHO05D003808 2.4e-10 68.9 92 48.9
Gorai.009G059100 Gossypium raimondii HOM05D003337 ORTHO05D003808 2.4e-10 68.9 54 70.4
HanXRQChr05g0134851 Helianthus annuus HOM05D003337 ORTHO05D003808 2.4e-10 68.9 100 46.0
Lj7C724G9 Lonicera japonica HOM05D003337 ORTHO05D003808 2.4e-10 68.9 96 50.0
Nitab4.5_0004664g0060 Nicotiana tabacum HOM05D003337 ORTHO05D003808 2.4e-10 68.9 98 45.9
Sabra18G0028200 Salix brachista HOM05D003337 ORTHO05D003808 3.2e-10 68.6 90 52.2
EL10Ac2g04195 Beta vulgaris HOM05D003337 ORTHO05D003808 4.1e-10 68.2 98 42.9
Manes.16G123500 Manihot esculenta HOM05D003337 ORTHO05D003808 4.1e-10 68.2 54 66.7
TWI32G1054 Tripterygium wilfordii HOM05D003337 ORTHO05D003808 4.1e-10 68.2 99 46.5
Haze_21497 Corylus avellana HOM05D003337 ORTHO05D003808 5.4e-10 67.8 93 51.6
MD08G1156500 Malus domestica HOM05D003337 ORTHO05D003808 5.4e-10 67.8 97 49.5
Prupe.1G482800 Prunus persica HOM05D003337 ORTHO05D003808 5.4e-10 67.8 54 68.5
COL.COLO4_18879 Corchorus olitorius HOM05D003337 ORTHO05D003808 7.1e-10 67.4 54 70.4
Glyma.06G066900 Glycine max HOM05D003337 ORTHO05D003808 7.1e-10 67.4 98 43.9
Lalb_Chr11g0063671 Lupinus albus HOM05D003337 ORTHO05D003808 7.1e-10 67.4 54 64.8
Thecc.09G022400 Theobroma cacao HOM05D003337 ORTHO05D003808 7.1e-10 67.4 95 46.3
AUR62012417 Chenopodium quinoa HOM05D003337 ORTHO05D003808 9.2e-10 67.0 54 63.0
AUR62031541 Chenopodium quinoa HOM05D003337 ORTHO05D003808 9.2e-10 67.0 54 63.0
Glyma.04G065500 Glycine max HOM05D003337 ORTHO05D003808 9.2e-10 67.0 100 43.0
Gohir.A05G055800 Gossypium hirsutum HOM05D003337 ORTHO05D003808 9.2e-10 67.0 54 68.5
Gohir.D05G057900 Gossypium hirsutum HOM05D003337 ORTHO05D003808 9.2e-10 67.0 54 68.5
Gorai.009G059000 Gossypium raimondii HOM05D003337 ORTHO05D003808 9.2e-10 67.0 54 68.5
Lj1g0009523 Lotus japonicus HOM05D003337 ORTHO05D003808 9.2e-10 67.0 54 64.8
Sopen06g008090 Solanum pennellii HOM05D003337 ORTHO05D003808 9.2e-10 67.0 99 42.4
arahy.Tifrunner.gnm1.ann1.C340QI Arachis hypogaea HOM05D003337 ORTHO05D003808 1.2e-09 66.6 54 64.8
FAN24G1139 Fragaria x ananassa HOM05D003337 ORTHO05D003808 1.2e-09 66.6 54 64.8
Nitab4.5_0002042g0010 Nicotiana tabacum HOM05D003337 ORTHO05D003808 1.2e-09 66.6 98 44.9
Migut.A00028 Erythranthe guttata HOM05D003337 ORTHO05D003808 1.6e-09 66.2 54 64.8
Phvul.009G091900 Phaseolus vulgaris HOM05D003337 ORTHO05D003808 1.6e-09 66.2 100 42.0
SalBow4G0163 Salvia bowleyana HOM05D003337 ORTHO05D003808 1.6e-09 66.2 93 46.2
FvH4_2g28850 Fragaria vesca HOM05D003337 ORTHO05D003808 2.1e-09 65.9 99 44.4
MD15G1127100 Malus domestica HOM05D003337 ORTHO05D003808 2.1e-09 65.9 90 48.9
TWI34G0528 Tripterygium wilfordii HOM05D003337 ORTHO05D003808 2.1e-09 65.9 99 44.4
VMungo1309G0140 Vigna mungo HOM05D003337 ORTHO05D003808 2.1e-09 65.9 97 42.3
arahy.Tifrunner.gnm1.ann1.EV8XFE Arachis hypogaea HOM05D003337 ORTHO05D003808 2.7e-09 65.5 54 63.0
Lalb_Chr23g0268451 Lupinus albus HOM05D003337 ORTHO05D003808 2.7e-09 65.5 54 64.8
QL02p021300 Quercus lobata HOM05D003337 ORTHO05D003808 2.7e-09 65.5 96 45.8
Medtr3g106700 Medicago truncatula HOM05D003337 ORTHO05D003808 3.5e-09 65.1 93 47.3
Gohir.D05G058000 Gossypium hirsutum HOM05D003337 ORTHO05D003808 4.6e-09 64.7 54 68.5
FAN20G0291 Fragaria x ananassa HOM05D003337 ORTHO05D003808 6.0e-09 64.3 54 63.0
Ah.16g104580 Amaranthus hybridus HOM05D003337 ORTHO05D003808 7.8e-09 63.9 54 61.1
FAN15G2120 Fragaria x ananassa HOM05D003337 ORTHO05D003808 7.8e-09 63.9 97 44.3
RcHm_v2.0_Chr6g0297611 Rosa chinensis HOM05D003337 ORTHO05D003808 7.8e-09 63.9 54 64.8
Duzib187G1394 Durio zibethinus HOM05D003337 ORTHO05D003808 1.0e-08 63.5 89 46.1
CiPaw.08G010200 Carya illinoinensis HOM05D003337 ORTHO05D003808 1.3e-08 63.2 98 41.8
Eucgr.C01723 Eucalyptus grandis HOM05D003337 ORTHO05D003808 1.3e-08 63.2 100 41.0
ClCG05G016760 Citrullus lanatus HOM05D003337 ORTHO05D003808 1.7e-08 62.8 99 42.4
MBI14_g37827_MAGBIO Magnolia biondii HOM05D003337 ORTHO05D003808 1.7e-08 62.8 98 42.9
MSTRG.26016 Avicennia marina HOM05D003337 ORTHO05D003808 2.3e-08 62.4 98 44.9
FAN27G2849 Fragaria x ananassa HOM05D003337 ORTHO05D003808 2.3e-08 62.4 97 43.3
Lalb_Chr08g0244191 Lupinus albus HOM05D003337 ORTHO05D003808 2.3e-08 62.4 54 61.1
PSO017G4016 Papaver somniferum HOM05D003337 ORTHO05D003808 2.3e-08 62.4 96 40.6
PSO170G2416 Papaver somniferum HOM05D003337 ORTHO05D003808 2.3e-08 62.4 96 40.6
Sed0015158 Sechium edule HOM05D003337 ORTHO05D003808 3.9e-08 61.6 99 43.4
TAR625G0257 Trochodendron aralioides HOM05D003337 ORTHO05D003808 3.9e-08 61.6 92 45.7
Nn8g39563 Nelumbo nucifera HOM05D003337 ORTHO05D003808 6.6e-08 60.8 92 43.5
AT2G25320 Arabidopsis thaliana HOM05D003337 ORTHO05D003808 8.6e-08 60.5 91 40.7
Carub.0004s0499 Capsella rubella HOM05D003337 ORTHO05D003808 8.6e-08 60.5 102 37.3
CsaV3_3G046270 Cucumis sativus L. HOM05D003337 ORTHO05D003808 8.6e-08 60.5 54 57.4
Sp4g04460 Schrenkiella parvula HOM05D003337 ORTHO05D003808 8.6e-08 60.5 90 42.2
TAR636G2033 Trochodendron aralioides HOM05D003337 ORTHO05D003808 1.1e-07 60.1 93 45.2
BcaC07g40870 Brassica carinata HOM05D003337 ORTHO05D003808 1.5e-07 59.7 90 44.4
TPR.G3117 Trifolium pratense HOM05D003337 ORTHO05D003808 1.5e-07 59.7 54 59.3
Aa31sc102G10 Aethionema arabicum HOM05D003337 ORTHO05D003808 1.9e-07 59.3 91 38.5
GSVIVG01015601001 Vitis vinifera HOM05D003337 ORTHO05D003808 1.9e-07 59.3 98 38.8
BcaB08g35177 Brassica carinata HOM05D003337 ORTHO05D003808 3.3e-07 58.5 90 43.3
A09p55690 Brassica napus HOM05D003337 ORTHO05D003808 3.3e-07 58.5 90 43.3
BraA09t40970Z Brassica rapa HOM05D003337 ORTHO05D003808 3.3e-07 58.5 90 43.3
Psat5g029560 Pisum sativum HOM05D003337 ORTHO05D003808 3.3e-07 58.5 54 55.6
C08p38690 Brassica napus HOM05D003337 ORTHO05D003808 4.3e-07 58.2 90 43.3
BolC8t51439H Brassica oleracea HOM05D003337 ORTHO05D003808 4.3e-07 58.2 90 43.3
MELO3C003713.2 Cucumis melo HOM05D003337 ORTHO05D003808 5.6e-07 57.8 94 40.4
Nn2g12124 Nelumbo nucifera HOM05D003337 ORTHO05D003808 5.6e-07 57.8 92 43.5
Oeu060140.1 Olea europaea HOM05D003337 ORTHO05D003808 5.6e-07 57.8 49 61.2
HPP92_015261 Vanilla planifolia HOM05D003337 ORTHO05D003808 7.3e-07 57.4 100 43.0
SGA_v2.0_scaffold64G21955 Striga asiatica HOM05D003337 ORTHO05D003808 3.6e-06 55.1 54 51.9
unitig_748.g8275 Utricularia gibba HOM05D003337 ORTHO05D003808 3.6e-06 55.1 90 43.3
Aqoxy7G02409 Aquilegia oxysepala HOM05D003337 ORTHO05D003808 4.7e-06 54.7 54 57.4
TAR383G0794 Trochodendron aralioides HOM05D003337 ORTHO05D003808 4.7e-06 54.7 54 57.4
BolC4t27068H Brassica oleracea HOM05D003337 ORTHO05D003808 6.2e-06 54.3 90 37.8
Thhalv10000009m.g Eutrema salsugineum HOM05D003337 ORTHO05D003808 6.2e-06 54.3 90 37.8
SEGI_13524 Sequoiadendron giganteum HOM05D003337 ORTHO05D003808 6.2e-06 54.3 98 39.8


User provided reference genes

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