Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 2.0e-295 1018.5 560 100.0
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 1.2e-186 657.1 622 65.6
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 9.7e-173 610.9 594 62.3
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 2.8e-172 609.4 585 62.2
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 1.4e-166 590.5 596 60.6
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 1.9e-152 543.5 633 54.8
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 1.6e-151 540.4 577 58.4
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 2.7e-151 539.7 587 54.2
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 3.0e-150 536.2 634 53.3
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 5.2e-150 535.4 588 55.6
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 3.4e-149 532.7 632 52.8
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 3.7e-148 529.3 579 55.3
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 1.1e-147 527.7 574 55.7
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 2.4e-147 526.6 649 52.2
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 1.0e-145 521.2 589 54.2
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 5.0e-145 518.8 583 54.9
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 3.3e-144 516.2 662 49.5
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 4.2e-144 515.8 581 54.9
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 4.2e-144 515.8 644 51.7
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 1.6e-143 513.8 580 55.2
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 8.0e-143 511.5 630 51.7
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 1.4e-142 510.8 668 51.5
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 2.3e-142 510.0 595 52.3
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 3.0e-142 509.6 586 53.8
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 3.0e-142 509.6 578 54.0
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 4.0e-142 509.2 615 53.7
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 4.0e-142 509.2 640 50.8
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 5.2e-142 508.8 584 52.9
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 2.6e-141 506.5 640 50.6
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 2.6e-141 506.5 640 50.8
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 4.4e-141 505.8 597 51.9
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 9.8e-141 504.6 638 52.0
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 1.3e-140 504.2 639 50.5
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 1.7e-140 503.8 590 51.7
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 2.4e-139 500.0 616 50.8
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 3.1e-139 499.6 593 51.6
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 3.1e-139 499.6 593 51.6
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 3.1e-139 499.6 580 51.7
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 2.0e-138 496.9 590 52.4
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 3.5e-138 496.1 562 54.4
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 4.5e-138 495.7 567 52.2
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 1.7e-137 493.8 562 52.5
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 5.6e-136 488.8 615 50.9
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 2.1e-135 486.9 627 48.5
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 2.8e-135 486.5 593 53.1
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 8.0e-135 485.0 539 54.4
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 3.0e-134 483.0 630 50.3
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 5.2e-134 482.3 570 52.8
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 5.2e-134 482.3 517 56.1
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 8.9e-134 481.5 613 50.9
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 1.2e-133 481.1 537 54.6
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 4.4e-133 479.2 560 51.6
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 2.2e-132 476.9 562 50.2
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 6.4e-132 475.3 593 50.3
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 8.3e-132 474.9 564 51.2
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 1.1e-131 474.6 531 54.0
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 3.2e-131 473.0 557 51.2
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 4.1e-131 472.6 557 51.7
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 9.2e-131 471.5 601 49.1
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 1.6e-130 470.7 547 51.6
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 2.0e-130 470.3 547 51.7
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 4.6e-130 469.2 564 50.7
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 6.0e-130 468.8 563 50.8
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 6.0e-130 468.8 533 52.3
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 7.8e-130 468.4 567 49.9
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 1.0e-129 468.0 564 50.9
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 1.3e-129 467.6 555 51.0
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 1.7e-129 467.2 576 50.7
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 8.6e-129 464.9 534 51.9
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 1.9e-128 463.8 557 50.6
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 2.5e-128 463.4 601 48.4
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 6.2e-127 458.8 547 50.8
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 3.7e-124 449.5 572 49.5
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 1.1e-123 448.0 508 52.6
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 2.4e-123 446.8 494 53.2
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 1.2e-122 444.5 600 47.3
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 2.0e-122 443.7 563 49.6
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 1.0e-121 441.4 427 59.3
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 2.3e-121 440.3 611 47.1
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 2.8e-119 433.3 513 52.8
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 8.1e-119 431.8 586 47.6
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 1.2e-117 427.9 574 48.4
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 9.9e-117 424.9 659 45.2
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 2.2e-116 423.7 634 44.3
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 2.2e-116 423.7 565 47.1
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 1.1e-115 421.4 524 50.8
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 4.4e-109 399.4 554 45.5
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 9.9e-101 371.7 604 43.9
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 1.2e-98 364.8 296 66.6
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 6.9e-94 349.0 291 64.9
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 2.2e-92 344.0 538 40.9
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 1.1e-91 341.7 559 41.1
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 7.6e-85 318.9 564 39.0
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 2.2e-84 317.4 568 37.0
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 7.9e-82 308.9 409 46.9
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 2.4e-70 270.8 519 38.5
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 1.1e-59 235.3 231 58.4
SEGI_23531 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 1.1e-46 192.2 178 54.5
Dinv37525 Davidia involucrata HOM05D007126 ORTHO05D008974 1.8e-41 174.9 272 45.6
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 1.7e-39 168.3 277 41.5
FAN18G3621 Fragaria x ananassa HOM05D007126 ORTHO05D008974 9.1e-38 162.5 315 41.9
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 7.7e-37 159.5 238 44.5
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 5.5e-35 153.3 292 38.4
FAN08G3578 Fragaria x ananassa HOM05D007126 ORTHO05D008974 1.0e-33 149.1 333 39.3
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 2.0e-32 144.8 461 28.6
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 2.0e-29 134.8 146 58.2
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 3.3e-27 127.5 226 38.9
Cfa021999 Carpinus fangiana HOM05D007126 ORTHO05D008974 1.4e-25 122.1 142 52.1
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 2.0e-13 81.6 112 49.1
FAN13G2101 Fragaria x ananassa HOM05D007126 ORTHO05D008974 8.3e-07 59.7 64 56.2


User provided reference genes

Program Settings