Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11202 Vaccinium macrocarpon HOM05D001181 ORTHO05D007712 1.5e-132 476.1 231 100.0
Rhsim02G0204900 Rhododendron simsii HOM05D001181 ORTHO05D007712 5.6e-66 255.0 134 94.0
CSS0039143 Camellia sinensis var. sinensis HOM05D001181 ORTHO05D007712 2.3e-56 223.0 129 82.9
Actinidia22321 Actinidia chinensis HOM05D001181 ORTHO05D007712 1.3e-54 217.2 135 79.3
Dinv41779 Davidia involucrata HOM05D001181 ORTHO05D007712 3.9e-51 205.7 156 66.0
CSS0017991 Camellia sinensis var. sinensis HOM05D001181 ORTHO05D007712 6.6e-51 204.9 129 78.3
CSS0031569 Camellia sinensis var. sinensis HOM05D001181 ORTHO05D007712 6.6e-51 204.9 129 78.3
Peaxi162Scf01013g00239 Petunia axillaris HOM05D001181 ORTHO05D007712 1.5e-50 203.8 134 72.4
Thecc.09G289200 Theobroma cacao HOM05D001181 ORTHO05D007712 1.9e-50 203.4 134 75.4
Cc10_g11160 Coffea canephora HOM05D001181 ORTHO05D007712 1.2e-49 200.7 179 58.1
Duzib150G0834 Durio zibethinus HOM05D001181 ORTHO05D007712 4.7e-49 198.7 125 76.8
Migut.N03357 Erythranthe guttata HOM05D001181 ORTHO05D007712 6.2e-49 198.4 130 73.8
Nitab4.5_0000167g0200 Nicotiana tabacum HOM05D001181 ORTHO05D007712 6.2e-49 198.4 134 70.1
MSTRG.22461 Avicennia marina HOM05D001181 ORTHO05D007712 8.1e-49 198.0 128 74.2
Nitab4.5_0001579g0040 Nicotiana tabacum HOM05D001181 ORTHO05D007712 8.1e-49 198.0 134 70.1
CAN.G202.8 Capsicum annuum HOM05D001181 ORTHO05D007712 1.4e-48 197.2 134 70.9
Potri.013G104200 Populus trichocarpa HOM05D001181 ORTHO05D007712 1.4e-48 197.2 129 72.1
Ciclev10020311m.g Citrus clementina HOM05D001181 ORTHO05D007712 3.1e-48 196.1 138 68.8
Gohir.A05G082900 Gossypium hirsutum HOM05D001181 ORTHO05D007712 5.2e-48 195.3 125 74.4
Gorai.009G087500 Gossypium raimondii HOM05D001181 ORTHO05D007712 8.9e-48 194.5 125 74.4
HanXRQChr12g0382121 Helianthus annuus HOM05D001181 ORTHO05D007712 8.9e-48 194.5 119 76.5
Prupe.1G556800 Prunus persica HOM05D001181 ORTHO05D007712 8.9e-48 194.5 132 72.0
FAN18G0918 Fragaria x ananassa HOM05D001181 ORTHO05D007712 1.5e-47 193.7 132 70.5
Gohir.D05G085800 Gossypium hirsutum HOM05D001181 ORTHO05D007712 2.0e-47 193.4 125 73.6
Nn5g27453 Nelumbo nucifera HOM05D001181 ORTHO05D007712 2.6e-47 193.0 135 71.1
PGR083G1668 Punica granatum HOM05D001181 ORTHO05D007712 3.4e-47 192.6 122 74.6
Solyc11g020060.2 Solanum lycopersicum HOM05D001181 ORTHO05D007712 3.4e-47 192.6 129 69.0
Sopen11g010190 Solanum pennellii HOM05D001181 ORTHO05D007712 3.4e-47 192.6 129 69.0
FAN13G0428 Fragaria x ananassa HOM05D001181 ORTHO05D007712 4.4e-47 192.2 126 72.2
FvH4_5g31330 Fragaria vesca HOM05D001181 ORTHO05D007712 7.6e-47 191.4 126 72.2
Cpa.g.sc177.21 Carica papaya HOM05D001181 ORTHO05D007712 9.9e-47 191.0 128 73.4
Lsat_1_v5_gn_5_67120 Lactuca sativa HOM05D001181 ORTHO05D007712 1.3e-46 190.7 119 75.6
Eucgr.F04070 Eucalyptus grandis HOM05D001181 ORTHO05D007712 2.2e-46 189.9 123 72.4
Atru.chr13.2345 Acer truncatum HOM05D001181 ORTHO05D007712 2.9e-46 189.5 128 71.9
Duzib170G0484 Durio zibethinus HOM05D001181 ORTHO05D007712 3.8e-46 189.1 125 72.0
Thecc.09G289100 Theobroma cacao HOM05D001181 ORTHO05D007712 3.8e-46 189.1 136 70.6
Glyma.04G110700 Glycine max HOM05D001181 ORTHO05D007712 6.4e-46 188.3 140 64.3
TAR376G0611 Trochodendron aralioides HOM05D001181 ORTHO05D007712 6.4e-46 188.3 128 71.1
CiPaw.07G234300 Carya illinoinensis HOM05D001181 ORTHO05D007712 8.4e-46 188.0 139 64.7
RcHm_v2.0_Chr7g0226521 Rosa chinensis HOM05D001181 ORTHO05D007712 8.4e-46 188.0 125 72.0
THA.LOC104810629 Tarenaya hassleriana HOM05D001181 ORTHO05D007712 8.4e-46 188.0 128 70.3
Aqoxy6G02411 Aquilegia oxysepala HOM05D001181 ORTHO05D007712 1.1e-45 187.6 129 70.5
Manes.02G199700 Manihot esculenta HOM05D001181 ORTHO05D007712 1.1e-45 187.6 129 70.5
CANSAT25G0440 Cannabis sativa HOM05D001181 ORTHO05D007712 1.4e-45 187.2 134 70.1
AUR62023528 Chenopodium quinoa HOM05D001181 ORTHO05D007712 1.4e-45 187.2 140 65.7
Lalb_Chr15g0080101 Lupinus albus HOM05D001181 ORTHO05D007712 1.4e-45 187.2 128 69.5
AUR62004582 Chenopodium quinoa HOM05D001181 ORTHO05D007712 1.9e-45 186.8 139 66.2
PSO017G2270 Papaver somniferum HOM05D001181 ORTHO05D007712 2.4e-45 186.4 128 68.8
Psat5g232400 Pisum sativum HOM05D001181 ORTHO05D007712 2.4e-45 186.4 129 68.2
SGA_v2.0_scaffold25G11066 Striga asiatica HOM05D004969 ORTHO05D007712 2.4e-45 186.4 129 67.4
Ca_14160_v3 Cicer arietinum L. HOM05D001181 ORTHO05D007712 3.2e-45 186.0 125 68.8
COL.COLO4_19948 Corchorus olitorius HOM05D001181 ORTHO05D007712 5.4e-45 185.3 125 72.8
Lj7A623G47 Lonicera japonica HOM05D001181 ORTHO05D007712 5.4e-45 185.3 128 70.3
HanXRQChr09g0262621 Helianthus annuus HOM05D001181 ORTHO05D007712 9.2e-45 184.5 125 69.6
TAR628G1015 Trochodendron aralioides HOM05D001181 ORTHO05D007712 1.2e-44 184.1 128 70.3
ECA233G5758 Erigeron canadensis HOM05D001181 ORTHO05D007712 1.6e-44 183.7 125 70.4
Sc01g0002050 Simmondsia chinensis HOM05D001181 ORTHO05D007712 1.6e-44 183.7 143 65.7
CDE07G1631 Ceratophyllum demersum HOM05D001181 ORTHO05D007712 6.0e-44 181.8 123 72.4
PSO170G0801 Papaver somniferum HOM05D001181 ORTHO05D007712 6.0e-44 181.8 128 67.2
TPR.G25511 Trifolium pratense HOM05D001181 ORTHO05D007712 7.8e-44 181.4 128 68.0
Medtr3g005970 Medicago truncatula HOM05D001181 ORTHO05D007712 1.0e-43 181.0 132 64.4
Sopen06g023790 Solanum pennellii HOM05D001181 ORTHO05D007712 1.0e-43 181.0 120 67.5
CARHR065050 Cardamine hirsuta HOM05D001181 ORTHO05D007712 1.7e-43 180.3 128 68.0
Sp5g27280 Schrenkiella parvula HOM05D001181 ORTHO05D007712 1.7e-43 180.3 159 57.2
Thhalv10018793m.g Eutrema salsugineum HOM05D001181 ORTHO05D007712 3.0e-43 179.5 120 70.8
Phvul.005G002200 Phaseolus vulgaris HOM05D001181 ORTHO05D007712 3.0e-43 179.5 123 68.3
Sabra13G0090100 Salix brachista HOM05D001181 ORTHO05D007712 3.0e-43 179.5 153 62.7
arahy.Tifrunner.gnm1.ann1.53YFBS Arachis hypogaea HOM05D001181 ORTHO05D007712 3.9e-43 179.1 123 69.1
arahy.Tifrunner.gnm1.ann1.ASS065 Arachis hypogaea HOM05D001181 ORTHO05D007712 3.9e-43 179.1 123 69.1
VMungo1080G0499 Vigna mungo HOM05D001181 ORTHO05D007712 3.9e-43 179.1 123 67.5
GSVIVG01025950001 Vitis vinifera HOM05D001181 ORTHO05D007712 3.9e-43 179.1 128 68.0
EL10Ac1g00154 Beta vulgaris HOM05D001181 ORTHO05D007712 1.5e-42 177.2 136 64.0
MD08G1217300 Malus domestica HOM05D001181 ORTHO05D007712 2.5e-42 176.4 122 67.2
Os07g0264100 Oryza sativa ssp. japonica HOM05D001181 ORTHO05D007712 2.5e-42 176.4 130 66.2
Aa31LG4G8370 Aethionema arabicum HOM05D001181 ORTHO05D007712 4.3e-42 175.6 128 65.6
Zm00001eb097200 Zea mays HOM05D001181 ORTHO05D007712 5.6e-42 175.3 131 65.6
Lj3g0016198 Lotus japonicus HOM05D001181 ORTHO05D007712 1.2e-41 174.1 123 66.7
AT1G72190 Arabidopsis thaliana HOM05D001181 ORTHO05D007712 1.6e-41 173.7 123 67.5
RcHm_v2.0_Chr7g0226551 Rosa chinensis HOM05D001181 ORTHO05D007712 2.8e-41 172.9 125 66.4
MELO3C024090.2 Cucumis melo HOM05D001181 ORTHO05D007712 3.6e-41 172.6 125 68.0
AL2G31860 Arabidopsis lyrata HOM05D001181 ORTHO05D007712 1.1e-40 171.0 128 64.8
CsaV3_7G024600 Cucumis sativus L. HOM05D001181 ORTHO05D007712 1.1e-40 171.0 125 67.2
SGA_v2.0_scaffold56G20007 Striga asiatica HOM05D001181 ORTHO05D007712 2.4e-40 169.9 124 64.5
TWI59G0211 Tripterygium wilfordii HOM05D001181 ORTHO05D007712 3.1e-40 169.5 120 65.8
Sed0016515 Sechium edule HOM05D001181 ORTHO05D007712 4.0e-40 169.1 125 67.2
HPP92_003713 Vanilla planifolia HOM05D001181 ORTHO05D007712 5.3e-40 168.7 123 65.9
Ah.05g178750 Amaranthus hybridus HOM05D001181 ORTHO05D007712 2.0e-39 166.8 130 61.5
ClCG09G010140 Citrullus lanatus HOM05D001181 ORTHO05D007712 3.4e-39 166.0 125 64.8
Carub.0002s1900 Capsella rubella HOM05D001181 ORTHO05D007712 4.4e-39 165.6 124 63.7
BcaC08g45721 Brassica carinata HOM05D001181 ORTHO05D007712 5.8e-39 165.2 137 59.9
BcaB03g15655 Brassica carinata HOM05D001181 ORTHO05D007712 9.9e-39 164.5 128 60.9
C06p35060 Brassica napus HOM05D001181 ORTHO05D007712 1.7e-38 163.7 137 59.9
BolC6t38610H Brassica oleracea HOM05D001181 ORTHO05D007712 1.7e-38 163.7 137 59.9
A07p30310 Brassica napus HOM05D001181 ORTHO05D007712 4.9e-38 162.2 125 60.8
BraA07t30668Z Brassica rapa HOM05D001181 ORTHO05D007712 4.9e-38 162.2 125 60.8
ATR1136G036 Amborella trichopoda HOM05D001181 ORTHO05D007712 1.4e-37 160.6 156 53.2
SEGI_12091 Sequoiadendron giganteum HOM05D001181 ORTHO05D007712 7.8e-36 154.8 124 59.7
ATR1136G151 Amborella trichopoda HOM05D001181 ORTHO05D007712 4.3e-34 149.1 120 60.0
QL02p023588 Quercus lobata HOM05D001181 ORTHO05D007712 4.3e-34 149.1 92 76.1
PGSC0003DMG400027624 Solanum tuberosum HOM05D001181 ORTHO05D007712 2.1e-33 146.7 91 76.9
Hund16765 Selenicereus undatus HOM05D001181 ORTHO05D007712 4.8e-33 145.6 104 71.2
DCAR_016677 Daucus carota HOM05D001181 ORTHO05D007712 1.8e-32 143.7 132 59.8
Pp3c16_19100 Physcomitrium patens HOM05D001181 ORTHO05D007712 5.8e-31 138.7 133 53.4
Os07g0263400 Oryza sativa ssp. japonica HOM05D001181 ORTHO05D007712 5.4e-29 132.1 94 68.1
Pp3c5_20110 Physcomitrium patens HOM05D001181 ORTHO05D007712 5.4e-29 132.1 125 53.6
unitig_21.g20247 Utricularia gibba HOM05D001181 ORTHO05D007712 5.4e-29 132.1 95 72.6
AagrBONN_evm.TU.Sc2ySwM_362.1380 Anthoceros agrestis HOM05D001181 ORTHO05D007712 2.1e-28 130.2 132 48.5
Mapoly0015s0127 Marchantia polymorpha HOM05D001181 ORTHO05D007712 1.6e-25 120.6 126 52.4
Hma1.2p1_2621F.1_g325590 Hydrangea macrophylla HOM05D001181 ORTHO05D007712 1.2e-23 114.4 82 72.0
Hma1.2p1_0942F.1_g239760 Hydrangea macrophylla HOM05D002302 ORTHO05D007712 2.0e-23 113.6 82 72.0
Peaxi162Scf01013g00230 Petunia axillaris HOM05D001181 ORTHO05D007712 1.3e-22 110.9 67 79.1
Hma1.2p1_1325F.1_g275740 Hydrangea macrophylla HOM05D001181 ORTHO05D007712 8.4e-22 108.2 69 76.8
Hma1.2p1_0158F.1_g069880 Hydrangea macrophylla HOM05D001181 ORTHO05D007712 7.9e-20 101.7 71 70.4
Haze_21348 Corylus avellana HOM05D001181 ORTHO05D007712 1.1e-18 97.8 63 73.0
Haze_21354 Corylus avellana HOM05D001181 ORTHO05D007712 1.1e-18 97.8 63 73.0
MCO12G354 Micromonas commoda HOM05D001181 ORTHO05D007712 2.6e-15 86.7 122 39.3
PRCOL_00002871 Prasinoderma coloniale HOM05D001181 ORTHO05D007712 5.5e-13 79.0 80 47.5
QL02p023605 Quercus lobata HOM05D000003 ORTHO05D000004 4.1e-08 62.8 56 46.4


User provided reference genes

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