Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 4.2e-181 637.9 319 100.0
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 8.0e-63 245.0 318 49.4
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 4.5e-50 202.6 312 44.9
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 6.5e-49 198.7 313 43.1
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 1.9e-48 197.2 304 45.4
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 7.2e-48 195.3 313 40.3
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 1.2e-47 194.5 305 42.3
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 3.6e-47 193.0 312 42.3
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 6.1e-47 192.2 313 40.3
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 1.8e-46 190.7 305 43.0
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 2.3e-46 190.3 307 41.7
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 5.2e-46 189.1 300 41.7
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 8.8e-46 188.3 307 41.4
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 1.2e-45 188.0 307 42.3
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 2.6e-45 186.8 307 41.4
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 3.4e-45 186.4 307 41.0
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 9.8e-45 184.9 306 40.5
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 1.7e-44 184.1 313 41.2
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 4.9e-44 182.6 313 38.0
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 1.1e-43 181.4 313 39.0
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.1e-43 181.4 312 41.7
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 1.8e-43 180.6 316 43.0
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 2.4e-43 180.3 313 39.6
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 4.1e-43 179.5 313 38.7
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 5.4e-43 179.1 313 39.3
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 5.4e-43 179.1 307 42.0
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 7.0e-43 178.7 315 38.4
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 2.7e-42 176.8 305 41.0
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 3.5e-42 176.4 306 39.5
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 4.5e-42 176.0 305 38.4
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 7.7e-42 175.3 305 42.3
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 1.0e-41 174.9 305 40.7
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.7e-41 174.1 305 40.7
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 1.7e-41 174.1 314 38.9
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 2.3e-41 173.7 304 39.8
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 3.8e-41 172.9 305 40.3
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 3.8e-41 172.9 312 40.1
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 5.0e-41 172.6 311 38.3
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 8.6e-41 171.8 312 39.4
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 1.1e-40 171.4 313 39.0
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 1.9e-40 170.6 316 36.1
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 1.9e-40 170.6 313 38.7
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 3.3e-40 169.9 305 38.0
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 4.3e-40 169.5 302 39.7
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 4.3e-40 169.5 321 38.9
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 5.6e-40 169.1 313 38.7
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 9.5e-40 168.3 311 39.9
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 6.1e-39 165.6 310 36.8
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 8.0e-39 165.2 310 37.4
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 8.0e-39 165.2 310 38.1
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 1.8e-38 164.1 311 35.0
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 1.8e-38 164.1 303 38.3
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 2.3e-38 163.7 305 36.1
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 3.0e-38 163.3 301 38.9
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 4.0e-38 162.9 318 36.2
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 6.8e-38 162.2 292 41.4
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 1.2e-37 161.4 310 36.5
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 3.4e-37 159.8 302 37.4
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 3.4e-37 159.8 315 34.3
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 4.4e-37 159.5 310 35.2
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 4.4e-37 159.5 302 37.7
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 5.7e-37 159.1 305 39.3
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 7.5e-37 158.7 310 36.8
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 9.8e-37 158.3 307 39.7
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 9.8e-37 158.3 307 37.1
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 1.3e-36 157.9 312 35.9
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 1.3e-36 157.9 304 38.5
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 1.7e-36 157.5 292 40.1
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 1.7e-36 157.5 308 38.0
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 2.9e-36 156.8 301 36.5
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 2.9e-36 156.8 302 35.8
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 3.7e-36 156.4 310 36.8
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 3.7e-36 156.4 307 36.5
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 4.9e-36 156.0 302 37.1
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 6.4e-36 155.6 307 36.5
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 3.2e-35 153.3 313 34.2
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 3.2e-35 153.3 303 35.6
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 4.1e-35 152.9 328 34.8
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 4.1e-35 152.9 307 37.5
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 4.1e-35 152.9 283 37.8
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 5.4e-35 152.5 290 40.0
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 7.0e-35 152.1 287 38.0
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 7.8e-34 148.7 310 34.8
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 1.0e-33 148.3 310 34.8
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 1.5e-32 144.4 331 34.1
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 1.5e-32 144.4 330 34.5
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 9.5e-32 141.7 317 33.4
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 4.7e-31 139.4 277 40.4
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 1.4e-30 137.9 279 35.8
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 1.8e-30 137.5 307 35.5
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 1.8e-30 137.5 205 43.9
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 2.3e-30 137.1 301 34.2
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 1.3e-28 131.3 78 76.9
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 2.2e-28 130.6 327 33.6
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 2.2e-28 130.6 312 34.3
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 3.7e-28 129.8 78 76.9
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 8.3e-28 128.6 76 77.6
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 2.0e-26 124.0 292 31.8
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 3.0e-25 120.2 307 34.2
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 5.0e-25 119.4 293 36.9
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 8.6e-25 118.6 256 37.1
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 1.1e-24 118.2 76 68.4
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 3.6e-23 113.2 310 32.3
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 2.3e-22 110.5 93 55.9
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 5.2e-22 109.4 71 69.0
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 4.9e-20 102.8 302 31.1
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 4.9e-20 102.8 95 56.8
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 2.1e-18 97.4 265 31.3
Hma1.2p1_0451F.1_g155800 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 2.7e-18 97.1 79 65.8
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 3.5e-18 96.7 280 31.4
GSVIVG01003186001 Vitis vinifera HOM05D006082 ORTHO05D007616 1.0e-17 95.1 75 66.7
Sed0024729 Sechium edule HOM05D006082 ORTHO05D007616 3.9e-17 93.2 96 51.0
GSVIVG01003191001 Vitis vinifera HOM05D006082 ORTHO05D007616 1.5e-16 91.3 163 41.7
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 5.6e-16 89.4 308 27.6
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 2.8e-15 87.0 285 26.3
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 6.2e-15 85.9 290 26.9
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 8.1e-15 85.5 78 55.1
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 1.3e-12 78.2 288 28.8
arahy.Tifrunner.gnm1.ann1.PGF6M0 Arachis hypogaea HOM05D006082 ORTHO05D007616 8.4e-12 75.5 319 24.8
C05p00940 Brassica napus HOM05D006082 ORTHO05D007616 1.1e-11 75.1 75 54.7
QL03p043604 Quercus lobata HOM05D006082 ORTHO05D007616 1.3e-09 68.2 52 71.2
MD07G1162600 Malus domestica HOM05D006082 ORTHO05D007616 1.1e-08 65.1 52 67.3
BcaC05g24597 Brassica carinata HOM05D006082 ORTHO05D007616 6.2e-07 59.3 45 66.7


User provided reference genes

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