Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11171 Vaccinium macrocarpon HOM05D000778 ORTHO05D000601 6.2e-70 267.7 172 100.0
Rhsim02G0200700 Rhododendron simsii HOM05D000778 ORTHO05D000601 1.0e-32 144.1 98 81.6
CSS0025204 Camellia sinensis var. sinensis HOM05D000778 ORTHO05D000601 5.0e-27 125.2 131 61.1
CSS0021475 Camellia sinensis var. sinensis HOM05D000778 ORTHO05D000601 4.6e-25 118.6 128 59.4
Actinidia13235 Actinidia chinensis HOM05D000778 ORTHO05D000601 4.8e-22 108.6 119 58.8
Actinidia22345 Actinidia chinensis HOM05D000778 ORTHO05D000601 1.0e-19 100.9 124 54.8
Dinv30140 Davidia involucrata HOM05D000778 ORTHO05D000601 5.5e-18 95.1 158 44.9
Hma1.2p1_0000F.1_g000070 Hydrangea macrophylla HOM05D000778 ORTHO05D000601 5.5e-18 95.1 134 51.5
vmacro05178 Vaccinium macrocarpon HOM05D000778 ORTHO05D000601 9.4e-18 94.4 125 48.8
Actinidia14604 Actinidia chinensis HOM05D000778 ORTHO05D000601 3.0e-16 89.4 135 50.4
Dinv08651 Davidia involucrata HOM05D000778 ORTHO05D000601 2.6e-15 86.3 159 42.1
Actinidia15672 Actinidia chinensis HOM05D000778 ORTHO05D000601 4.4e-15 85.5 135 48.1
Lj7A722G43 Lonicera japonica HOM05D000778 ORTHO05D000601 4.4e-15 85.5 134 48.5
Hma1.2p1_0043F.1_g025780 Hydrangea macrophylla HOM05D000778 ORTHO05D000601 5.7e-15 85.1 128 44.5
GSVIVG01035857001 Vitis vinifera HOM05D000778 ORTHO05D000601 5.3e-13 78.6 116 47.4
TAR636G1713 Trochodendron aralioides HOM05D000778 ORTHO05D000601 9.1e-13 77.8 114 47.4
Migut.E01800 Erythranthe guttata HOM05D000778 ORTHO05D000601 3.4e-12 75.9 118 45.8
Manes.03G014900 Manihot esculenta HOM05D000778 ORTHO05D000601 1.0e-11 74.3 134 44.0
Atru.chr7.2424 Acer truncatum HOM05D000778 ORTHO05D000601 2.9e-11 72.8 138 42.0
TAR626G0265 Trochodendron aralioides HOM05D000778 ORTHO05D000601 3.8e-11 72.4 117 44.4
Manes.16G121800 Manihot esculenta HOM05D000778 ORTHO05D000601 6.5e-11 71.6 129 44.2
TAR625G1344 Trochodendron aralioides HOM05D000778 ORTHO05D000601 6.5e-11 71.6 120 45.8
TAR626G1583 Trochodendron aralioides HOM05D000778 ORTHO05D000601 8.5e-11 71.2 117 44.4
Duzib168G0519 Durio zibethinus HOM05D000778 ORTHO05D000601 1.4e-10 70.5 77 53.2
Rhsim07G0157700 Rhododendron simsii HOM05D000778 ORTHO05D000601 1.4e-10 70.5 118 41.5
Aqoxy7G03680 Aquilegia oxysepala HOM05D000778 ORTHO05D000601 1.9e-10 70.1 118 44.1
Potri.006G254400 Populus trichocarpa HOM05D000778 ORTHO05D000601 2.5e-10 69.7 132 37.9
Prupe.1G480800 Prunus persica HOM05D000778 ORTHO05D000601 2.5e-10 69.7 87 55.2
SalBow1G2267 Salvia bowleyana HOM05D000778 ORTHO05D000601 2.5e-10 69.7 105 52.4
Oeu051867.1 Olea europaea HOM05D000778 ORTHO05D000601 3.2e-10 69.3 68 63.2
Duzib150G1013 Durio zibethinus HOM05D000778 ORTHO05D000601 4.2e-10 68.9 77 51.9
Lj8C706T3 Lonicera japonica HOM05D000778 ORTHO05D000601 5.5e-10 68.6 71 57.7
Sabra06G0198800 Salix brachista HOM05D000778 ORTHO05D000601 5.5e-10 68.6 135 38.5
RcHm_v2.0_Chr6g0297971 Rosa chinensis HOM05D000778 ORTHO05D000601 7.2e-10 68.2 74 60.8
Gohir.D07G032200 Gossypium hirsutum HOM05D000778 ORTHO05D000601 9.4e-10 67.8 77 49.4
COL.COLO4_18857 Corchorus olitorius HOM05D000778 ORTHO05D000601 1.2e-09 67.4 82 51.2
CAN.G1230.7 Capsicum annuum HOM05D000778 ORTHO05D000601 1.6e-09 67.0 69 56.5
Gohir.A07G028100 Gossypium hirsutum HOM05D000778 ORTHO05D000601 1.6e-09 67.0 74 50.0
SalBow4G1516 Salvia bowleyana HOM05D000778 ORTHO05D000601 1.6e-09 67.0 101 48.5
ECA233G1996 Erigeron canadensis HOM05D000778 ORTHO05D000601 2.1e-09 66.6 112 43.8
MD08G1150300 Malus domestica HOM05D000778 ORTHO05D000601 2.1e-09 66.6 112 45.5
Oeu043030.1 Olea europaea HOM05D000778 ORTHO05D000601 2.1e-09 66.6 144 41.0
Migut.A00044 Erythranthe guttata HOM05D000778 ORTHO05D000601 2.7e-09 66.2 120 48.3
Psat5g028760 Pisum sativum HOM05D000778 ORTHO05D000601 2.7e-09 66.2 160 39.4
Nitab4.5_0008266g0010 Nicotiana tabacum HOM05D000778 ORTHO05D000601 3.6e-09 65.9 94 45.7
Hund04530 Selenicereus undatus HOM05D000778 ORTHO05D000601 3.6e-09 65.9 134 38.8
Thecc.09G025000 Theobroma cacao HOM05D000778 ORTHO05D000601 3.6e-09 65.9 158 32.9
Gohir.A13G181500 Gossypium hirsutum HOM05D000778 ORTHO05D000601 8.0e-09 64.7 73 52.1
Ciclev10008326m.g Citrus clementina HOM05D000778 ORTHO05D000601 1.0e-08 64.3 140 40.7
FvH4_2g29090 Fragaria vesca HOM05D000778 ORTHO05D000601 1.0e-08 64.3 85 52.9
FAN24G1223 Fragaria x ananassa HOM05D000778 ORTHO05D000601 1.0e-08 64.3 85 52.9
Gohir.D05G057100 Gossypium hirsutum HOM05D000778 ORTHO05D000601 1.0e-08 64.3 78 47.4
Nn2g12061 Nelumbo nucifera HOM05D000778 ORTHO05D000601 1.0e-08 64.3 89 49.4
Gohir.D06G100200 Gossypium hirsutum HOM05D000778 ORTHO05D000601 1.4e-08 63.9 78 50.0
Gohir.D13G189300 Gossypium hirsutum HOM05D000778 ORTHO05D000601 1.4e-08 63.9 78 51.3
Gorai.010G115100 Gossypium raimondii HOM05D000778 ORTHO05D000601 1.4e-08 63.9 78 50.0
Gorai.013G214800 Gossypium raimondii HOM05D000778 ORTHO05D000601 1.4e-08 63.9 78 51.3
MSTRG.11618 Avicennia marina HOM05D000778 ORTHO05D000601 1.8e-08 63.5 98 43.9
ClCG05G016890 Citrullus lanatus HOM05D000778 ORTHO05D000601 1.8e-08 63.5 67 55.2
MELO3C003697.2 Cucumis melo HOM05D000778 ORTHO05D000601 1.8e-08 63.5 65 56.9
MBI01_g36595_MAGBIO Magnolia biondii HOM05D000778 ORTHO05D000601 1.8e-08 63.5 118 39.8
MSTRG.1723 Avicennia marina HOM05D000778 ORTHO05D000601 2.3e-08 63.2 109 44.0
DCAR_003097 Daucus carota HOM05D000778 ORTHO05D009105 2.3e-08 63.2 68 54.4
Glyma.17G211100 Glycine max HOM05D000778 ORTHO05D000601 2.3e-08 63.2 87 47.1
FAN20G1702 Fragaria x ananassa HOM05D000778 ORTHO05D000601 3.0e-08 62.8 85 51.8
Glyma.06G068300 Glycine max HOM05D000778 ORTHO05D000601 3.9e-08 62.4 149 37.6
Glyma.14G116600 Glycine max HOM05D000778 ORTHO05D000601 3.9e-08 62.4 82 50.0
Nitab4.5_0000109g0300 Nicotiana tabacum HOM05D000778 ORTHO05D000601 3.9e-08 62.4 154 35.1
Potri.018G027500 Populus trichocarpa HOM05D000778 ORTHO05D000601 3.9e-08 62.4 134 39.6
TAR383G0311 Trochodendron aralioides HOM05D000778 ORTHO05D000601 3.9e-08 62.4 122 38.5
CsaV3_3G046420 Cucumis sativus L. HOM05D000778 ORTHO05D000601 5.2e-08 62.0 62 58.1
FAN15G3123 Fragaria x ananassa HOM05D000778 ORTHO05D000601 5.2e-08 62.0 85 51.8
FAN27G0799 Fragaria x ananassa HOM05D000778 ORTHO05D000601 5.2e-08 62.0 87 52.9
Gorai.009G058200 Gossypium raimondii HOM05D000778 ORTHO05D000601 6.7e-08 61.6 78 46.2
Solyc06g066030.4 Solanum lycopersicum HOM05D000778 ORTHO05D000601 6.7e-08 61.6 69 55.1
Sopen06g024510 Solanum pennellii HOM05D000778 ORTHO05D000601 6.7e-08 61.6 69 55.1
MSTRG.26006 Avicennia marina HOM05D000778 ORTHO05D000601 8.8e-08 61.2 140 37.9
Gohir.A06G098218 Gossypium hirsutum HOM05D000778 ORTHO05D000601 8.8e-08 61.2 78 48.7
Sed0021020 Sechium edule HOM05D000778 ORTHO05D000601 8.8e-08 61.2 72 54.2
TWI32G1045 Tripterygium wilfordii HOM05D000778 ORTHO05D000601 8.8e-08 61.2 73 54.8
Cpa.g.sc750.3 Carica papaya HOM05D000778 ORTHO05D000601 1.1e-07 60.8 74 52.7
Cc08_g00650 Coffea canephora HOM05D000778 ORTHO05D000601 1.1e-07 60.8 69 53.6
Sc23g0006730 Simmondsia chinensis HOM05D000778 ORTHO05D000601 1.1e-07 60.8 81 51.9
Peaxi162Scf00643g00317 Petunia axillaris HOM05D000778 ORTHO05D000601 2.6e-07 59.7 94 43.6
Sc09g0008270 Simmondsia chinensis HOM05D000778 ORTHO05D000601 2.6e-07 59.7 112 42.0
VMungo1309G1367 Vigna mungo HOM05D000778 ORTHO05D000601 3.3e-07 59.3 71 54.9
Ca_13028_v3 Cicer arietinum L. HOM05D000778 ORTHO05D000601 4.4e-07 58.9 68 55.9
Nitab4.5_0006708g0020 Nicotiana tabacum HOM05D000778 ORTHO05D000601 4.4e-07 58.9 138 39.9
GSVIVG01015552001 Vitis vinifera HOM05D000778 ORTHO05D000601 4.4e-07 58.9 67 52.2
Phvul.001G051200 Phaseolus vulgaris HOM05D000778 ORTHO05D000601 5.7e-07 58.5 93 40.9
Phvul.009G093100 Phaseolus vulgaris HOM05D000778 ORTHO05D000601 5.7e-07 58.5 121 40.5
ATR1120G030 Amborella trichopoda HOM05D000778 ORTHO05D000601 7.4e-07 58.2 78 52.6
Ciclev10008193m.g Citrus clementina HOM05D000778 ORTHO05D000601 7.4e-07 58.2 119 40.3
Eucgr.C02774 Eucalyptus grandis HOM05D000778 ORTHO05D000601 7.4e-07 58.2 111 37.8
MBI04_g29346_MAGBIO Magnolia biondii HOM05D000778 ORTHO05D000601 7.4e-07 58.2 75 50.7
CANSAT25G2802 Cannabis sativa HOM05D000778 ORTHO05D000601 9.7e-07 57.8 103 41.7
Glyma.04G066800 Glycine max HOM05D000778 ORTHO05D000601 9.7e-07 57.8 106 37.7
Solyc08g059800.3 Solanum lycopersicum HOM05D000778 ORTHO05D000601 1.3e-06 57.4 149 36.9
EL10Ac2g04228 Beta vulgaris HOM05D000778 ORTHO05D000601 1.7e-06 57.0 70 54.3
TPR.G3101 Trifolium pratense HOM05D000778 ORTHO05D000601 1.7e-06 57.0 157 33.8
Nitab4.5_0000209g0190 Nicotiana tabacum HOM05D000778 ORTHO05D000601 2.2e-06 56.6 138 39.9
Sabra18G0029800 Salix brachista HOM05D000778 ORTHO05D000601 2.2e-06 56.6 100 43.0
Lalb_Chr08g0244091 Lupinus albus HOM05D000778 ORTHO05D000601 2.8e-06 56.2 148 35.1
Medtr1g012530 Medicago truncatula HOM05D000778 ORTHO05D000601 2.8e-06 56.2 146 37.0
Oeu060155.1 Olea europaea HOM05D000778 ORTHO05D000601 3.7e-06 55.8 99 43.4
Sed0016899 Sechium edule HOM05D000778 ORTHO05D000601 3.7e-06 55.8 89 44.9
PGSC0003DMG400015849 Solanum tuberosum HOM05D000778 ORTHO05D000601 3.7e-06 55.8 69 59.4
CiPaw.07G223100 Carya illinoinensis HOM05D000778 ORTHO05D000601 4.8e-06 55.5 74 54.1
Haze_21521 Corylus avellana HOM05D000778 ORTHO05D000601 6.3e-06 55.1 70 54.3
Zm00001eb386490 Zea mays HOM05D000778 ORTHO05D000601 8.2e-06 54.7 65 53.8


User provided reference genes

Program Settings