Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 2.3e-188 662.1 354 100.0
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 8.2e-85 318.2 253 73.5
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 2.6e-75 286.6 388 49.7
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 8.5e-74 281.6 362 52.2
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 3.0e-55 219.9 363 44.1
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 8.3e-53 211.8 361 42.4
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 7.8e-51 205.3 329 43.8
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 2.9e-50 203.4 212 59.4
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 6.6e-50 202.2 332 42.2
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.5e-49 201.1 330 42.4
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 3.3e-49 199.9 330 42.4
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 2.8e-48 196.8 319 42.6
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 3.6e-48 196.4 330 41.8
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 1.8e-47 194.1 322 42.5
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 4.9e-45 186.0 347 40.3
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 1.9e-44 184.1 336 38.4
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 4.1e-44 183.0 279 44.8
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 5.4e-44 182.6 286 45.1
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 9.2e-44 181.8 289 44.6
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 1.6e-43 181.0 318 41.2
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 1.6e-43 181.0 338 39.3
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 4.6e-43 179.5 360 35.6
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 6.0e-43 179.1 284 43.0
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 1.0e-42 178.3 208 54.3
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 1.3e-42 177.9 346 39.0
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 3.0e-42 176.8 350 36.6
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 8.6e-42 175.3 362 36.7
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 1.5e-41 174.5 335 37.6
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 2.5e-41 173.7 289 42.6
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 7.3e-41 172.2 287 40.1
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 7.3e-41 172.2 361 36.8
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 2.1e-40 170.6 357 36.1
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 6.2e-40 169.1 302 40.1
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 6.2e-40 169.1 310 39.4
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 6.2e-40 169.1 323 39.6
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 8.0e-40 168.7 339 37.5
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 1.1e-39 168.3 317 39.1
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 1.1e-39 168.3 330 39.4
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 1.1e-39 168.3 325 39.4
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 1.8e-39 167.5 292 40.8
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 2.3e-39 167.2 376 35.4
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 3.1e-39 166.8 294 40.5
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 4.0e-39 166.4 335 38.5
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 8.9e-39 165.2 325 36.9
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 8.9e-39 165.2 177 53.7
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 1.2e-38 164.9 328 36.9
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 1.2e-38 164.9 328 36.9
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 1.2e-38 164.9 359 35.9
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 2.0e-38 164.1 300 39.0
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 3.4e-38 163.3 330 39.1
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 3.4e-38 163.3 332 38.9
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 3.4e-38 163.3 216 45.4
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 4.4e-38 162.9 332 36.4
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 5.8e-38 162.5 328 36.3
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 5.8e-38 162.5 293 42.0
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 5.8e-38 162.5 323 36.5
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 7.5e-38 162.2 289 39.4
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 9.8e-38 161.8 328 36.3
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 1.3e-37 161.4 323 38.7
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 1.3e-37 161.4 323 39.0
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 1.7e-37 161.0 284 38.7
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 1.7e-37 161.0 320 39.7
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 2.2e-37 160.6 347 37.5
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 3.7e-37 159.8 335 36.7
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 4.9e-37 159.5 283 40.6
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 4.9e-37 159.5 195 50.8
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 8.3e-37 158.7 317 38.8
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 2.4e-36 157.1 324 38.9
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 4.1e-36 156.4 216 45.4
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 5.4e-36 156.0 318 36.5
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 5.4e-36 156.0 216 45.4
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.1e-35 154.1 245 42.9
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 3.5e-35 153.3 333 35.7
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 4.6e-35 152.9 332 35.5
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 3.9e-34 149.8 387 33.6
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 6.6e-34 149.1 333 34.8
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 1.1e-33 148.3 146 58.9
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 6.2e-32 142.5 352 33.2
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 1.4e-31 141.4 104 75.0
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 3.1e-31 140.2 201 45.3
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 8.3e-29 132.1 221 38.0
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 8.3e-29 132.1 212 40.6
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 2.4e-28 130.6 219 38.4
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 1.7e-26 124.4 104 61.5
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 3.9e-26 123.2 207 40.6
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 1.6e-24 117.9 334 32.0
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 6.6e-18 95.9 214 36.0
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 9.0e-15 85.5 103 44.7
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 4.9e-13 79.7 347 27.4
Rhsim02G0188900 Rhododendron simsii HOM05D007522 ORTHO05D009518 1.1e-12 78.6 48 85.4
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 5.4e-12 76.3 163 37.4
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 7.8e-11 72.4 88 51.1
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 1.3e-10 71.6 80 47.5
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 5.1e-10 69.7 90 41.1
CSS0039372 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 5.3e-07 59.7 41 73.2
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 5.8e-06 56.2 104 37.5


User provided reference genes

Program Settings