Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11124 Vaccinium macrocarpon HOM05D005141 ORTHO05D006250 9.2e-273 943.0 480 100.0
Rhsim02G0188600 Rhododendron simsii HOM05D005141 ORTHO05D006250 3.9e-146 522.3 686 50.0
Dinv30204 Davidia involucrata HOM05D005141 ORTHO05D006250 8.1e-128 461.5 486 56.4
Actinidia13429 Actinidia chinensis HOM05D005141 ORTHO05D006250 4.3e-121 439.1 476 56.5
Cfa021484 Carpinus fangiana HOM05D005141 ORTHO05D006250 2.7e-107 393.3 477 52.0
Haze_21614 Corylus avellana HOM05D005141 ORTHO05D006250 3.3e-105 386.3 443 53.0
Prupe.1G467500 Prunus persica HOM05D005141 ORTHO05D006250 1.4e-103 380.9 482 49.0
Lj7A714G44 Lonicera japonica HOM05D005141 ORTHO05D006250 4.1e-103 379.4 376 57.4
RcHm_v2.0_Chr6g0312851 Rosa chinensis HOM05D005141 ORTHO05D006250 6.9e-103 378.6 482 49.4
GSVIVG01035797001 Vitis vinifera HOM05D005141 ORTHO05D006250 9.1e-103 378.3 495 49.3
CiPaw.07G218200 Carya illinoinensis HOM05D005141 ORTHO05D006250 7.7e-102 375.2 477 49.1
CiPaw.08G014900 Carya illinoinensis HOM05D005141 ORTHO05D006250 2.9e-101 373.2 477 49.5
QL12p031441 Quercus lobata HOM05D005141 ORTHO05D006250 1.1e-100 371.3 478 50.2
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla HOM05D005141 ORTHO05D006250 7.2e-100 368.6 476 49.4
Actinidia13280 Actinidia chinensis HOM05D005141 ORTHO05D006250 4.7e-99 365.9 311 66.2
TAR383G0458 Trochodendron aralioides HOM05D005141 ORTHO05D006250 2.6e-97 360.1 486 48.6
FAN27G2430 Fragaria x ananassa HOM05D005141 ORTHO05D006250 2.8e-96 356.7 480 47.3
Potri.018G033700 Populus trichocarpa HOM05D005141 ORTHO05D006250 4.8e-96 355.9 477 47.6
TAR626G1320 Trochodendron aralioides HOM05D005141 ORTHO05D006250 4.1e-95 352.8 487 48.5
FAN20G1096 Fragaria x ananassa HOM05D005141 ORTHO05D006250 5.3e-95 352.4 480 47.1
MD08G1137500 Malus domestica HOM05D005141 ORTHO05D006250 7.0e-95 352.1 485 48.7
Sabra18G0034600 Salix brachista HOM05D005141 ORTHO05D006250 7.0e-95 352.1 477 47.4
FAN15G0409 Fragaria x ananassa HOM05D005141 ORTHO05D006250 9.1e-95 351.7 480 46.7
Manes.16G067800 Manihot esculenta HOM05D005141 ORTHO05D006250 3.5e-94 349.7 480 47.7
FAN24G3348 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.0e-93 348.2 480 46.9
MD15G1116100 Malus domestica HOM05D005141 ORTHO05D006250 1.3e-93 347.8 484 48.3
Manes.03G065500 Manihot esculenta HOM05D005141 ORTHO05D006250 3.8e-93 346.3 481 48.2
Solyc06g065650.3 Solanum lycopersicum HOM05D005141 ORTHO05D006250 4.2e-92 342.8 482 47.3
PGSC0003DMG400026089 Solanum tuberosum HOM05D005141 ORTHO05D006250 4.2e-92 342.8 482 47.9
Sopen06g024010 Solanum pennellii HOM05D005141 ORTHO05D006250 2.1e-91 340.5 482 46.9
Nitab4.5_0005873g0030 Nicotiana tabacum HOM05D005141 ORTHO05D006250 3.6e-91 339.7 481 47.4
TWI32G0021 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 8.0e-91 338.6 482 46.9
CAN.G199.28 Capsicum annuum HOM05D005141 ORTHO05D006250 1.8e-90 337.4 480 47.7
Ciclev10008356m.g Citrus clementina HOM05D005141 ORTHO05D006250 2.0e-89 334.0 478 45.6
Nn2g11855 Nelumbo nucifera HOM05D005141 ORTHO05D006250 4.4e-89 332.8 494 44.5
Nitab4.5_0011669g0010 Nicotiana tabacum HOM05D005141 ORTHO05D006250 1.7e-88 330.9 481 46.2
CANSAT25G3062 Cannabis sativa HOM05D005141 ORTHO05D006250 2.8e-88 330.1 488 44.9
Cc08_g08010 Coffea canephora HOM05D005141 ORTHO05D006250 2.4e-87 327.0 485 43.9
TPR.G34685 Trifolium pratense HOM05D005141 ORTHO05D006250 1.2e-86 324.7 375 51.7
TAR636G0300 Trochodendron aralioides HOM05D005141 ORTHO05D006250 3.5e-86 323.2 487 45.8
Eucgr.C01809 Eucalyptus grandis HOM05D005141 ORTHO05D006250 7.7e-86 322.0 484 44.8
TWI34G0135 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 1.0e-85 321.6 430 48.1
Atru.chr7.2334 Acer truncatum HOM05D005141 ORTHO05D006250 1.7e-85 320.9 373 52.3
Sabra06G0193700 Salix brachista HOM05D005141 ORTHO05D006250 2.9e-85 320.1 486 45.9
Ca_15703_v3 Cicer arietinum L. HOM05D005141 ORTHO05D006250 3.8e-85 319.7 373 51.5
Thecc.09G145300 Theobroma cacao HOM05D005141 ORTHO05D006250 3.8e-85 319.7 377 50.4
VMungo1309G3073 Vigna mungo HOM05D005141 ORTHO05D006250 1.5e-84 317.8 480 44.4
Glyma.06G072700 Glycine max HOM05D005141 ORTHO05D006250 2.5e-84 317.0 482 45.9
Medtr3g107950 Medicago truncatula HOM05D005141 ORTHO05D006250 3.2e-84 316.6 379 51.2
Glyma.04G071400 Glycine max HOM05D005141 ORTHO05D006250 6.1e-83 312.4 485 44.5
Lalb_Chr23g0268881 Lupinus albus HOM05D005141 ORTHO05D006250 3.0e-82 310.1 378 49.2
Dinv11587 Davidia involucrata HOM05D005141 ORTHO05D006250 6.8e-82 308.9 284 63.7
Peaxi162Scf00545g00034 Petunia axillaris HOM05D005141 ORTHO05D006250 6.8e-82 308.9 492 43.5
Potri.006G247500 Populus trichocarpa HOM05D005141 ORTHO05D006250 1.2e-81 308.1 356 51.7
Gorai.009G011200 Gossypium raimondii HOM05D005141 ORTHO05D006250 1.3e-80 304.7 374 49.2
Lj1g0018494 Lotus japonicus HOM05D005141 ORTHO05D006250 6.3e-80 302.4 372 49.2
Phvul.009G097300 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 1.1e-79 301.6 484 43.4
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea HOM05D005141 ORTHO05D006250 4.1e-79 299.7 339 51.0
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea HOM05D005141 ORTHO05D006250 4.5e-78 296.2 359 48.7
DCAR_022871 Daucus carota HOM05D005141 ORTHO05D006250 1.3e-77 294.7 478 43.5
Duzib187G0541 Durio zibethinus HOM05D005141 ORTHO05D006250 1.3e-77 294.7 486 43.4
Oeu014659.3 Olea europaea HOM05D005141 ORTHO05D006250 2.7e-75 287.0 388 47.7
Duzib168G0094 Durio zibethinus HOM05D005141 ORTHO05D006250 6.1e-75 285.8 485 41.4
SalBow4G0713 Salvia bowleyana HOM05D005141 ORTHO05D006250 1.0e-74 285.0 336 49.7
FvH4_2g30050 Fragaria vesca HOM05D005141 ORTHO05D006250 1.4e-74 284.6 353 48.2
MSTRG.25868 Avicennia marina HOM05D005141 ORTHO05D006250 2.0e-73 280.8 330 50.6
PSO782G1260 Papaver somniferum HOM05D005141 ORTHO05D006250 2.0e-73 280.8 462 42.2
Oeu032487.3 Olea europaea HOM05D005141 ORTHO05D006250 1.3e-72 278.1 330 51.8
Nn8g39307 Nelumbo nucifera HOM05D005141 ORTHO05D006250 1.4e-71 274.6 359 47.9
ClCG08G012940 Citrullus lanatus HOM05D005141 ORTHO05D006250 1.8e-71 274.2 491 43.2
Lalb_Chr08g0243831 Lupinus albus HOM05D005141 ORTHO05D006250 4.1e-71 273.1 370 46.5
Duzib150G1154 Durio zibethinus HOM05D005141 ORTHO05D006250 7.0e-71 272.3 402 44.3
Sed0000645 Sechium edule HOM05D005141 ORTHO05D006250 9.2e-71 271.9 381 47.0
MBI04_g39529_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 5.9e-70 269.2 452 40.7
HanXRQChr02g0050641 Helianthus annuus HOM05D005141 ORTHO05D006250 2.9e-69 266.9 415 42.9
ECA233G0036 Erigeron canadensis HOM05D005141 ORTHO05D006250 6.6e-69 265.8 476 40.1
Gohir.A05G010100 Gossypium hirsutum HOM05D005141 ORTHO05D006250 1.5e-68 264.6 373 45.8
Cpa.g.sc91.20 Carica papaya HOM05D005141 ORTHO05D006250 1.2e-67 261.5 350 46.9
Gohir.D05G010800 Gossypium hirsutum HOM05D005141 ORTHO05D006250 2.3e-66 257.3 374 44.9
COL.COLO4_24046 Corchorus olitorius HOM05D005141 ORTHO05D006250 5.2e-66 256.1 312 50.0
Migut.A00282 Erythranthe guttata HOM05D005141 ORTHO05D006250 7.5e-65 252.3 336 49.7
MELO3C011217.2 Cucumis melo HOM05D005141 ORTHO05D006250 2.9e-64 250.4 387 45.0
PSO063G0687 Papaver somniferum HOM05D005141 ORTHO05D006250 3.2e-63 246.9 460 39.6
MBI01_g37337_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 3.9e-61 240.0 362 43.1
Psat0s1782g0240 Pisum sativum HOM05D005141 ORTHO05D006250 6.6e-61 239.2 253 52.2
PGR031G2456 Punica granatum HOM05D005141 ORTHO05D006250 4.0e-58 229.9 472 37.5
EL10Ac2g02550 Beta vulgaris HOM05D005141 ORTHO05D006250 2.6e-57 227.3 381 43.8
HanXRQChr13g0402161 Helianthus annuus HOM05D005141 ORTHO05D006250 2.6e-57 227.3 290 48.6
Phvul.001G055100 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 3.9e-53 213.4 296 45.3
Lsat_1_v5_gn_1_43100 Lactuca sativa HOM05D005141 ORTHO05D006250 6.6e-53 212.6 391 42.7
Lsat_1_v5_gn_6_22941 Lactuca sativa HOM05D005141 ORTHO05D006250 9.5e-52 208.8 424 38.2
Sed0008448 Sechium edule HOM05D005141 ORTHO05D006250 2.3e-50 204.1 482 36.3
AUR62024850 Chenopodium quinoa HOM05D005141 ORTHO05D006250 2.6e-49 200.7 338 41.7
SGA_v2.0_scaffold27G11478 Striga asiatica HOM05D005141 ORTHO05D006250 7.5e-49 199.1 308 44.8
ClCG05G017130 Citrullus lanatus HOM05D005141 ORTHO05D006250 2.9e-48 197.2 481 35.3
MELO3C003675.2 Cucumis melo HOM05D005141 ORTHO05D006250 1.9e-47 194.5 492 35.2
CsaV3_3G046630 Cucumis sativus L. HOM05D005141 ORTHO05D006250 2.4e-47 194.1 443 36.3
CsaV3_2G031660 Cucumis sativus L. HOM05D005141 ORTHO05D006250 3.1e-42 177.2 293 44.0
ATR0083G007 Amborella trichopoda HOM05D005141 ORTHO05D006250 5.8e-41 172.9 375 36.5
Aqoxy7G01897 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 1.7e-40 171.4 327 37.9
AT4G32570 Arabidopsis thaliana HOM05D005141 ORTHO05D006250 1.0e-37 162.2 336 38.7
Glyma.17G205200 Glycine max HOM05D005141 ORTHO05D006250 2.3e-37 161.0 191 49.2
C03p87260 Brassica napus HOM05D005141 ORTHO05D006250 6.2e-35 152.9 343 37.0
BolC3t21027H Brassica oleracea HOM05D005141 ORTHO05D006250 6.2e-35 152.9 343 37.0
AL7G19190 Arabidopsis lyrata HOM05D005141 ORTHO05D006250 1.2e-33 148.7 440 33.0
Sp7g30350 Schrenkiella parvula HOM05D005141 ORTHO05D006250 1.5e-33 148.3 444 33.1
BraA08t33764Z Brassica rapa HOM05D005141 ORTHO05D006250 2.6e-33 147.5 448 32.8
THA.LOC104803820 Tarenaya hassleriana HOM05D005141 ORTHO05D006250 4.4e-33 146.7 488 33.2
BcaC01g01013 Brassica carinata HOM05D005141 ORTHO05D006250 1.7e-32 144.8 444 32.4
A08p18120 Brassica napus HOM05D005141 ORTHO05D006250 3.8e-32 143.7 447 32.0
Carub.0007s0798 Capsella rubella HOM05D005141 ORTHO05D006250 3.8e-32 143.7 454 33.0
SHI18604 Sapria himalayana HOM05D005141 ORTHO05D006250 4.9e-32 143.3 313 38.7
Thhalv10025562m.g Eutrema salsugineum HOM05D005141 ORTHO05D006250 6.4e-32 142.9 441 33.6
HPP92_009098 Vanilla planifolia HOM05D005141 ORTHO05D006250 1.2e-30 138.7 307 36.2
CSS0000568 Camellia sinensis var. sinensis HOM05D005141 ORTHO05D006250 7.8e-30 136.0 147 56.5
Aa31LG4G11720 Aethionema arabicum HOM05D005141 ORTHO05D006250 3.9e-29 133.7 336 35.7
BcaB03g12752 Brassica carinata HOM05D005141 ORTHO05D006250 6.6e-29 132.9 450 32.2
C01p06380 Brassica napus HOM05D005141 ORTHO05D006250 2.4e-26 124.4 439 31.4
BraA01t00550Z Brassica rapa HOM05D005141 ORTHO05D006250 6.9e-26 122.9 440 31.6
A01p05810 Brassica napus HOM05D005141 ORTHO05D006250 3.4e-25 120.6 439 31.4
BolC1t00634H Brassica oleracea HOM05D005141 ORTHO05D006250 3.4e-25 120.6 434 31.1
BcaC09g52048 Brassica carinata HOM05D005141 ORTHO05D006250 5.8e-25 119.8 443 30.9
unitig_46.g18533 Utricularia gibba HOM05D005141 ORTHO05D006250 3.2e-23 114.0 273 36.3
unitig_37.g12225 Utricularia gibba HOM05D005141 ORTHO05D006250 1.2e-22 112.1 294 33.7
Ah.10g025860 Amaranthus hybridus HOM05D005141 ORTHO05D006250 3.9e-21 107.1 214 39.7
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 1.1e-18 99.0 301 32.6
BcaC08g44885 Brassica carinata HOM05D005141 ORTHO05D006250 3.8e-16 90.5 173 36.4
Pp3c22_12420 Physcomitrium patens HOM05D005141 ORTHO05D006250 6.4e-16 89.7 148 41.9
C06p25010 Brassica napus HOM05D000698 ORTHO05D006250 8.4e-16 89.4 182 36.3
Pp3c19_8700 Physcomitrium patens HOM05D005141 ORTHO05D006250 4.2e-15 87.0 149 40.9
A06p26660 Brassica napus HOM05D005141 ORTHO05D006250 2.3e-13 81.3 171 35.7
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis HOM05D005141 ORTHO05D006250 1.1e-12 79.0 181 35.9
Mapoly0079s0053 Marchantia polymorpha HOM05D005141 ORTHO05D006250 1.5e-12 78.6 205 34.6
Aqoxy81s001 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 5.6e-12 76.6 153 40.5
SMO143G0273 Selaginella moellendorffii HOM05D005141 ORTHO05D006250 2.1e-11 74.7 145 37.9
Cpa.g.sc91.24 Carica papaya HOM05D005141 ORTHO05D006250 1.5e-09 68.6 103 44.7
Haze_10527 Corylus avellana HOM05D005141 ORTHO05D006250 5.8e-09 66.6 99 40.4
C07p35200 Brassica napus HOM05D005141 ORTHO05D006250 1.7e-08 65.1 140 35.0
BolC7t44052H Brassica oleracea HOM05D005141 ORTHO05D006250 1.7e-08 65.1 140 35.0
BolC9t58511H Brassica oleracea HOM05D005141 ORTHO05D006250 8.4e-08 62.8 60 55.0
Dinv07115 Davidia involucrata HOM05D005141 ORTHO05D030953 2.1e-06 58.2 57 63.2


User provided reference genes

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