Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11088 Vaccinium macrocarpon HOM05D004469 ORTHO05D426737 8.3e-106 387.1 205 100.0
vmacro06114 Vaccinium macrocarpon HOM05D004469 ORTHO05D005429 2.9e-10 69.7 44 70.5
Dinv41443 Davidia involucrata HOM05D004469 ORTHO05D005429 8.6e-10 68.2 44 70.5
Actinidia14229 Actinidia chinensis HOM05D004469 ORTHO05D005429 1.9e-09 67.0 44 65.9
Actinidia26357 Actinidia chinensis HOM05D004469 ORTHO05D005429 1.9e-09 67.0 44 65.9
CiPaw.04G177500 Carya illinoinensis HOM05D004469 ORTHO05D005429 9.5e-09 64.7 44 65.9
MBI14_g24228_MAGBIO Magnolia biondii HOM05D004469 ORTHO05D005429 9.5e-09 64.7 44 63.6
Cfa002260 Carpinus fangiana HOM05D004469 ORTHO05D005429 1.2e-08 64.3 44 65.9
Cc06_g07630 Coffea canephora HOM05D004469 ORTHO05D005429 1.2e-08 64.3 57 54.4
Nitab4.5_0002286g0020 Nicotiana tabacum HOM05D004469 ORTHO05D005429 1.6e-08 63.9 44 63.6
Rhsim03G0253400 Rhododendron simsii HOM05D004469 ORTHO05D005429 2.1e-08 63.5 44 65.9
TAR625G0398 Trochodendron aralioides HOM05D004469 ORTHO05D005429 2.1e-08 63.5 44 63.6
CSS0041761 Camellia sinensis var. sinensis HOM05D004469 ORTHO05D005429 2.8e-08 63.2 44 65.9
arahy.Tifrunner.gnm1.ann1.2E9WSC Arachis hypogaea HOM05D004469 ORTHO05D005429 3.6e-08 62.8 42 69.0
arahy.Tifrunner.gnm1.ann1.K75BJP Arachis hypogaea HOM05D004469 ORTHO05D005429 3.6e-08 62.8 42 69.0
Haze_25443 Corylus avellana HOM05D004469 ORTHO05D005429 3.6e-08 62.8 44 63.6
Nitab4.5_0002845g0050 Nicotiana tabacum HOM05D004469 ORTHO05D005429 3.6e-08 62.8 44 61.4
Nitab4.5_0010073g0010 Nicotiana tabacum HOM05D004469 ORTHO05D005429 3.6e-08 62.8 44 61.4
Prupe.7G257500 Prunus persica HOM05D004469 ORTHO05D005429 3.6e-08 62.8 42 66.7
GSVIVG01012860001 Vitis vinifera HOM05D004469 ORTHO05D005429 3.6e-08 62.8 44 65.9
CAN.G1281.7 Capsicum annuum HOM05D004469 ORTHO05D005429 4.7e-08 62.4 44 59.1
FAN23G0971 Fragaria x ananassa HOM05D004469 ORTHO05D005429 4.7e-08 62.4 42 66.7
FAN28G2138 Fragaria x ananassa HOM05D004469 ORTHO05D005429 4.7e-08 62.4 42 66.7
FAN28G2979 Fragaria x ananassa HOM05D004469 ORTHO05D005429 4.7e-08 62.4 42 66.7
Lj9C704T18 Lonicera japonica HOM05D004469 ORTHO05D005429 4.7e-08 62.4 44 61.4
MD15G1162100 Malus domestica HOM05D004469 ORTHO05D005429 6.1e-08 62.0 42 66.7
CANSAT11G1945 Cannabis sativa HOM05D004469 ORTHO05D005429 8.0e-08 61.6 44 59.1
Oeu028017.1 Olea europaea HOM05D004469 ORTHO05D005429 8.0e-08 61.6 44 65.9
Atru.chr7.2015 Acer truncatum HOM05D004469 ORTHO05D005429 1.0e-07 61.2 44 63.6
Migut.J01235 Erythranthe guttata HOM05D004469 ORTHO05D005429 1.0e-07 61.2 44 63.6
FvH4_1g01990 Fragaria vesca HOM05D004469 ORTHO05D005429 1.0e-07 61.2 42 64.3
FAN19G1855 Fragaria x ananassa HOM05D004469 ORTHO05D005429 1.0e-07 61.2 42 64.3
Medtr2g450730 Medicago truncatula HOM05D004469 ORTHO05D005429 1.0e-07 61.2 44 61.4
PSO210G6517 Papaver somniferum HOM05D004469 ORTHO05D005429 1.0e-07 61.2 44 56.8
Peaxi162Scf00088g00521 Petunia axillaris HOM05D004469 ORTHO05D005429 1.0e-07 61.2 44 59.1
AL3G45030 Arabidopsis lyrata HOM05D004469 ORTHO05D005429 1.4e-07 60.8 44 56.8
AT2G12550 Arabidopsis thaliana HOM05D004469 ORTHO05D005429 1.4e-07 60.8 44 56.8
QL02p090812 Quercus lobata HOM05D004469 ORTHO05D005429 1.4e-07 60.8 42 64.3
Thhalv10001944m.g Eutrema salsugineum HOM05D004469 ORTHO05D005429 1.8e-07 60.5 43 58.1
Thhalv10022623m.g Eutrema salsugineum HOM05D004469 ORTHO05D005429 1.8e-07 60.5 43 58.1
Glyma.15G198300 Glycine max HOM05D004469 ORTHO05D005429 1.8e-07 60.5 44 63.6
RcHm_v2.0_Chr2g0087051 Rosa chinensis HOM05D004469 ORTHO05D005429 1.8e-07 60.5 41 65.9
Sp3g26680 Schrenkiella parvula HOM05D004469 ORTHO05D005429 1.8e-07 60.5 43 58.1
PGSC0003DMG400030724 Solanum tuberosum HOM05D004469 ORTHO05D005429 1.8e-07 60.5 44 59.1
Ca_03095_v3 Cicer arietinum L. HOM05D004469 ORTHO05D005429 2.3e-07 60.1 44 59.1
Glyma.09G091700 Glycine max HOM05D004469 ORTHO05D005429 2.3e-07 60.1 44 63.6
Aqoxy7G03591 Aquilegia oxysepala HOM05D004469 ORTHO05D005429 3.0e-07 59.7 42 57.1
MSTRG.19616 Avicennia marina HOM05D004469 ORTHO05D005429 3.0e-07 59.7 44 59.1
Carub.0003s2782 Capsella rubella HOM05D004469 ORTHO05D005429 3.0e-07 59.7 44 56.8
CARHR105080 Cardamine hirsuta HOM05D004469 ORTHO05D005429 3.0e-07 59.7 44 56.8
Gohir.D08G101600 Gossypium hirsutum HOM05D004469 ORTHO05D005429 3.0e-07 59.7 42 61.9
Gorai.004G109600 Gossypium raimondii HOM05D004469 ORTHO05D005429 3.0e-07 59.7 42 61.9
Solyc07g007370.3 Solanum lycopersicum HOM05D004469 ORTHO05D005429 3.0e-07 59.7 44 56.8
Sopen07g003440 Solanum pennellii HOM05D004469 ORTHO05D005429 3.0e-07 59.7 44 56.8
Gohir.A08G091100 Gossypium hirsutum HOM05D004469 ORTHO05D005429 4.0e-07 59.3 42 61.9
SalBow1G3789 Salvia bowleyana HOM05D004469 ORTHO05D005429 4.0e-07 59.3 65 46.2
Duzib187G0975 Durio zibethinus HOM05D004469 ORTHO05D005429 5.2e-07 58.9 42 61.9
ECA234G1865 Erigeron canadensis HOM05D004469 ORTHO05D005429 5.2e-07 58.9 44 56.8
FAN26G0918 Fragaria x ananassa HOM05D004469 ORTHO05D005429 5.2e-07 58.9 40 65.0
Nn2g12194 Nelumbo nucifera HOM05D004469 ORTHO05D005429 5.2e-07 58.9 44 56.8
Psat1g021280 Pisum sativum HOM05D004469 ORTHO05D005429 5.2e-07 58.9 44 59.1
DCAR_014918 Daucus carota HOM05D004469 ORTHO05D005429 6.8e-07 58.5 45 55.6
Duzib168G2240 Durio zibethinus HOM05D004469 ORTHO05D005429 6.8e-07 58.5 43 58.1
Manes.14G119700 Manihot esculenta HOM05D004469 ORTHO05D005429 6.8e-07 58.5 44 56.8
Aa31sc54G60 Aethionema arabicum HOM05D004469 ORTHO05D005429 1.2e-06 57.8 43 55.8
BcaB08g34526 Brassica carinata HOM05D004469 ORTHO05D005429 1.2e-06 57.8 43 53.5
Cpa.g.sc46.70 Carica papaya HOM05D004469 ORTHO05D005429 1.2e-06 57.8 44 54.5
Ciclev10007887m.g Citrus clementina HOM05D004469 ORTHO05D005429 1.2e-06 57.8 44 59.1
Lsat_1_v5_gn_5_92700 Lactuca sativa HOM05D004469 ORTHO05D005429 1.2e-06 57.8 44 54.5
Lj6g0024161 Lotus japonicus HOM05D004469 ORTHO05D005429 1.2e-06 57.8 41 63.4
HPP92_003256 Vanilla planifolia HOM05D004469 ORTHO05D005429 1.2e-06 57.8 63 44.4
Duzib168G2148 Durio zibethinus HOM05D004469 ORTHO05D005429 1.5e-06 57.4 42 59.5
Hund09311 Selenicereus undatus HOM05D004469 ORTHO05D005429 1.5e-06 57.4 42 59.5
Eucgr.L03187 Eucalyptus grandis HOM05D004469 ORTHO05D005429 2.0e-06 57.0 44 54.5
Eucgr.L03235 Eucalyptus grandis HOM05D004469 ORTHO05D005429 2.0e-06 57.0 44 54.5
Sabra18G0101500 Salix brachista HOM05D004469 ORTHO05D005429 2.0e-06 57.0 43 58.1
BcaC01g03128 Brassica carinata HOM05D004469 ORTHO05D005429 2.6e-06 56.6 43 53.5
A03p44900 Brassica napus HOM05D004469 ORTHO05D005429 2.6e-06 56.6 43 53.5
C03p55780 Brassica napus HOM05D004469 ORTHO05D005429 2.6e-06 56.6 43 53.5
BolC3t17859H Brassica oleracea HOM05D004469 ORTHO05D005429 2.6e-06 56.6 43 53.5
BraA03t13626Z Brassica rapa HOM05D004469 ORTHO05D005429 2.6e-06 56.6 43 53.5
Potri.018G118143 Populus trichocarpa HOM05D004469 ORTHO05D005429 2.6e-06 56.6 43 58.1
unitig_27.g25106 Utricularia gibba HOM05D004469 ORTHO05D005429 2.6e-06 56.6 48 54.2
TPR.G23109 Trifolium pratense HOM05D004469 ORTHO05D005429 3.4e-06 56.2 44 56.8
FvH4_3g33700 Fragaria vesca HOM05D004469 ORTHO05D005429 4.4e-06 55.8 41 63.4
FAN11G3069 Fragaria x ananassa HOM05D004469 ORTHO05D005429 4.4e-06 55.8 41 63.4
FAN25G0032 Fragaria x ananassa HOM05D004469 ORTHO05D005429 4.4e-06 55.8 41 63.4
Potri.006G061500 Populus trichocarpa HOM05D004469 ORTHO05D005429 4.4e-06 55.8 43 55.8
RcHm_v2.0_Chr5g0061231 Rosa chinensis HOM05D004469 ORTHO05D005429 4.4e-06 55.8 41 63.4
Thecc.09G137700 Theobroma cacao HOM05D004469 ORTHO05D005429 4.4e-06 55.8 42 57.1
Sabra18G0099700 Salix brachista HOM05D004469 ORTHO05D005429 5.7e-06 55.5 43 55.8
Phvul.009G212100 Phaseolus vulgaris HOM05D004469 ORTHO05D005429 7.5e-06 55.1 44 56.8
Sabra06G0044100 Salix brachista HOM05D004469 ORTHO05D005429 7.5e-06 55.1 43 55.8
TWI32G1222 Tripterygium wilfordii HOM05D004469 ORTHO05D005429 7.5e-06 55.1 42 59.5
VMungo1309G2337 Vigna mungo HOM05D004469 ORTHO05D005429 7.5e-06 55.1 42 61.9
FAN16G0997 Fragaria x ananassa HOM05D004469 ORTHO05D005429 9.8e-06 54.7 41 61.0
FAN21G2818 Fragaria x ananassa HOM05D004469 ORTHO05D005429 9.8e-06 54.7 41 63.4
Lalb_Chr11g0073091 Lupinus albus HOM05D004469 ORTHO05D005429 9.8e-06 54.7 44 54.5


User provided reference genes

Program Settings