Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 1.7e-183 646.0 341 100.0
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 4.1e-142 508.4 346 80.6
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 1.2e-128 463.8 347 73.8
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 3.5e-125 452.2 345 74.8
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 7.6e-120 434.5 346 69.4
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 3.8e-119 432.2 344 68.9
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 2.4e-118 429.5 338 70.4
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 7.1e-118 427.9 344 68.9
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 9.3e-118 427.6 347 68.6
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 1.2e-117 427.2 348 68.1
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 6.0e-117 424.9 347 68.0
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 6.0e-117 424.9 347 68.0
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 7.8e-117 424.5 347 68.0
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 3.0e-116 422.5 346 67.3
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 1.1e-115 420.6 315 74.3
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 1.9e-115 419.9 345 68.4
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 4.3e-115 418.7 349 68.2
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 2.1e-114 416.4 342 68.1
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 3.6e-114 415.6 348 66.7
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 4.8e-114 415.2 345 65.2
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 1.1e-113 414.1 351 67.0
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 1.4e-113 413.7 340 68.2
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 1.8e-113 413.3 347 66.6
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 2.4e-113 412.9 346 67.3
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 5.3e-113 411.8 351 67.2
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 5.3e-113 411.8 348 65.8
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 2.0e-112 409.8 348 64.7
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 7.6e-112 407.9 344 66.3
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 9.9e-112 407.5 351 66.7
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 9.9e-112 407.5 343 66.5
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 2.9e-111 406.0 360 62.5
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 3.8e-111 405.6 343 65.9
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 8.4e-111 404.4 341 64.8
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 2.4e-110 402.9 344 66.3
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 4.2e-110 402.1 337 66.2
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 9.3e-110 401.0 349 65.6
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.6e-109 400.2 344 66.0
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 3.5e-109 399.1 335 66.0
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.0e-108 397.5 348 64.7
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 2.3e-108 396.4 353 63.2
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 3.9e-108 395.6 271 77.9
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 5.1e-108 395.2 343 66.5
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 8.7e-108 394.4 355 63.7
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 1.9e-107 393.3 347 64.3
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.9e-107 393.3 352 63.6
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 5.6e-107 391.7 348 64.7
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 9.6e-107 391.0 341 63.0
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 1.6e-106 390.2 354 62.1
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 3.6e-106 389.0 357 61.3
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 4.8e-106 388.7 346 62.7
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 4.8e-106 388.7 337 65.3
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 6.2e-106 388.3 349 62.2
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 8.1e-106 387.9 339 64.0
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 1.4e-105 387.1 346 63.0
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 1.8e-105 386.7 353 62.0
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 3.1e-105 386.0 346 62.7
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 6.9e-105 384.8 344 63.1
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 2.6e-104 382.9 344 62.8
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 3.4e-104 382.5 345 62.9
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.7e-103 380.2 352 61.4
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 4.2e-102 375.6 331 63.1
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 1.2e-101 374.0 342 61.7
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 1.2e-101 374.0 282 70.6
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 1.2e-101 374.0 306 66.0
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 1.6e-101 373.6 335 63.9
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 2.1e-101 373.2 272 72.8
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 4.6e-101 372.1 290 69.0
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 4.6e-101 372.1 310 65.8
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 7.9e-101 371.3 323 63.2
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 7.9e-101 371.3 347 62.5
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 1.0e-100 370.9 342 60.8
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 1.0e-100 370.9 345 62.6
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 1.0e-100 370.9 346 61.0
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 1.3e-100 370.5 315 66.0
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 2.3e-100 369.8 284 69.4
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 1.1e-99 367.5 385 56.4
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 3.3e-99 365.9 315 63.5
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 4.3e-99 365.5 258 75.6
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 5.6e-99 365.2 320 64.4
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 7.4e-99 364.8 371 58.5
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 9.6e-99 364.4 347 60.8
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 9.6e-99 364.4 260 73.1
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 2.2e-95 353.2 314 62.7
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 9.3e-94 347.8 271 67.5
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 1.6e-93 347.1 334 56.9
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 2.7e-93 346.3 367 56.7
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 1.8e-92 343.6 307 61.2
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 6.7e-92 341.7 343 56.3
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 3.4e-88 329.3 243 71.2
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 2.2e-87 326.6 340 55.3
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.4e-86 323.9 252 69.0
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 7.2e-86 321.6 341 54.0
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.6e-82 310.5 346 53.8
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 5.9e-80 302.0 279 63.4
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.7e-79 300.4 243 70.4
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 5.5e-78 295.4 238 64.3
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 3.7e-74 282.7 278 58.3
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 7.7e-72 275.0 282 52.5
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.4e-70 270.8 243 63.8
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 4.2e-70 269.2 283 56.5
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 3.0e-68 263.1 274 56.6
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 2.0e-67 260.4 275 50.2
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 1.8e-65 253.8 284 48.6
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 5.2e-60 235.7 285 44.6
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.7e-58 230.7 271 48.3
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 6.3e-58 228.8 273 46.9
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.8e-57 227.3 275 45.1
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 1.6e-53 214.2 305 41.6
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 4.4e-51 206.1 129 80.6
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 8.5e-47 191.8 279 41.2
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 7.8e-40 168.7 159 65.4
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 2.3e-39 167.2 123 69.9
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 8.6e-39 165.2 269 38.7
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 3.7e-34 149.8 268 34.7
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 2.8e-29 133.7 342 34.8
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.5e-19 101.3 268 29.1
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 3.9e-15 86.7 280 28.9
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 1.3e-07 61.6 52 55.8
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 8.6e-07 58.9 36 80.6
SEGI_14321 Sequoiadendron giganteum HOM05D006532 ORTHO05D385294 2.5e-06 57.4 95 43.2
PGSC0003DMG401002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 4.3e-06 56.6 82 50.0


User provided reference genes

Program Settings