Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11032 Vaccinium macrocarpon HOM05D003679 ORTHO05D004265 0.0e+00 1448.3 813 100.0
Rhsim02G0172900 Rhododendron simsii HOM05D003679 ORTHO05D004265 3.7e-221 772.3 788 63.8
CSS0010343 Camellia sinensis var. sinensis HOM05D003679 ORTHO05D004265 2.0e-163 580.5 809 52.8
CSS0038034 Camellia sinensis var. sinensis HOM05D003679 ORTHO05D004265 1.0e-162 578.2 809 52.4
Actinidia29376 Actinidia chinensis HOM05D003679 ORTHO05D004265 1.5e-158 564.3 805 51.4
Actinidia03530 Actinidia chinensis HOM05D003679 ORTHO05D004265 3.4e-158 563.1 805 50.4
Dinv22115 Davidia involucrata HOM05D003679 ORTHO05D004265 8.3e-149 531.9 805 48.7
Hma1.2p1_0016F.1_g010780 Hydrangea macrophylla HOM05D003679 ORTHO05D004265 6.0e-147 525.8 806 48.9
GSVIVG01037227001 Vitis vinifera HOM05D003679 ORTHO05D004265 3.9e-146 523.1 807 48.1
QL09p001735 Quercus lobata HOM05D003679 ORTHO05D004265 4.3e-145 519.6 810 46.9
Dinv37407 Davidia involucrata HOM05D003679 ORTHO05D004265 8.9e-143 511.9 808 49.0
CiPaw.03G013700 Carya illinoinensis HOM05D003679 ORTHO05D004265 1.1e-140 505.0 800 45.4
CsaV3_5G039850 Cucumis sativus L. HOM05D003679 ORTHO05D004265 1.6e-139 501.1 799 46.4
Prupe.8G006100 Prunus persica HOM05D003679 ORTHO05D004265 1.6e-139 501.1 804 46.4
Thecc.08G179800 Theobroma cacao HOM05D003679 ORTHO05D004265 1.6e-139 501.1 804 47.4
MELO3C022164.2 Cucumis melo HOM05D003679 ORTHO05D004265 1.0e-138 498.4 798 46.2
Glyma.12G241900 Glycine max HOM05D003679 ORTHO05D004265 5.1e-138 496.1 802 46.9
MD10G1003500 Malus domestica HOM05D003679 ORTHO05D004265 8.6e-138 495.4 798 46.2
COL.COLO4_25139 Corchorus olitorius HOM05D003679 ORTHO05D004265 1.9e-137 494.2 801 46.1
Cc10_g16340 Coffea canephora HOM05D003679 ORTHO05D004265 5.6e-137 492.7 809 46.4
Glyma.09G002400 Glycine max HOM05D003679 ORTHO05D004265 7.3e-137 492.3 800 46.2
FvH4_2g00710 Fragaria vesca HOM05D003679 ORTHO05D004265 1.4e-135 488.0 799 45.6
Manes.02G207300 Manihot esculenta HOM05D003679 ORTHO05D004265 4.0e-135 486.5 803 46.8
Lj3g0002271 Lotus japonicus HOM05D003679 ORTHO05D004265 2.0e-134 484.2 799 46.6
ClCG08G000780 Citrullus lanatus HOM05D003679 ORTHO05D004265 3.4e-134 483.4 797 45.9
Sed0026343 Sechium edule HOM05D003679 ORTHO05D004265 7.6e-134 482.3 804 45.6
Phvul.011G216200 Phaseolus vulgaris HOM05D003679 ORTHO05D004265 9.9e-134 481.9 798 45.9
FAN24G0047 Fragaria x ananassa HOM05D003679 ORTHO05D004265 4.9e-133 479.6 805 45.2
MD05G1002800 Malus domestica HOM05D003679 ORTHO05D004265 4.9e-133 479.6 799 45.3
Lj9C697G2 Lonicera japonica HOM05D003679 ORTHO05D004265 6.4e-133 479.2 805 45.2
FAN27G2038 Fragaria x ananassa HOM05D003679 ORTHO05D004265 1.9e-132 477.6 805 45.2
VMungo1127G1022 Vigna mungo HOM05D003679 ORTHO05D004265 3.2e-132 476.9 799 45.7
RcHm_v2.0_Chr6g0251091 Rosa chinensis HOM05D003679 ORTHO05D004265 4.1e-132 476.5 803 44.6
Lalb_Chr19g0131861 Lupinus albus HOM05D003679 ORTHO05D004265 7.1e-132 475.7 795 44.7
FAN20G2916 Fragaria x ananassa HOM05D003679 ORTHO05D004265 2.7e-131 473.8 805 45.1
Gohir.A05G275400 Gossypium hirsutum HOM05D003679 ORTHO05D004265 7.8e-131 472.2 801 43.4
Medtr4g030910 Medicago truncatula HOM05D003679 ORTHO05D004265 1.0e-130 471.9 806 45.4
Potri.013G098700 Populus trichocarpa HOM05D003679 ORTHO05D004265 6.6e-130 469.2 803 44.3
Eucgr.F04075 Eucalyptus grandis HOM05D003679 ORTHO05D004265 2.5e-129 467.2 799 45.3
Aqoxy4G00374 Aquilegia oxysepala HOM05D003679 ORTHO05D004265 7.3e-129 465.7 805 44.8
Sc23g0000050 Simmondsia chinensis HOM05D003679 ORTHO05D004265 1.2e-128 464.9 812 44.6
MSTRG.1602 Avicennia marina HOM05D003679 ORTHO05D004265 2.8e-128 463.8 759 44.7
Ciclev10018760m.g Citrus clementina HOM05D003679 ORTHO05D004265 3.6e-128 463.4 808 43.1
Gorai.009G290500 Gossypium raimondii HOM05D003679 ORTHO05D004265 1.1e-127 461.8 799 43.9
SGA_v2.0_scaffold118G32618 Striga asiatica HOM05D003679 ORTHO05D004265 1.4e-127 461.5 799 43.3
Migut.C01386 Erythranthe guttata HOM05D003679 ORTHO05D004265 2.4e-127 460.7 798 43.1
TAR629G3435 Trochodendron aralioides HOM05D003679 ORTHO05D004265 2.4e-127 460.7 652 47.7
Gohir.D05G277500 Gossypium hirsutum HOM05D003679 ORTHO05D004265 3.1e-127 460.3 799 43.8
DCAR_003511 Daucus carota HOM05D003679 ORTHO05D004265 2.6e-126 457.2 805 43.6
TPR.G34140 Trifolium pratense HOM05D003679 ORTHO05D004265 3.4e-126 456.8 816 43.9
Ca_19809_v3 Cicer arietinum L. HOM05D003679 ORTHO05D004265 5.8e-126 456.1 814 44.3
arahy.Tifrunner.gnm1.ann1.AU4LT2 Arachis hypogaea HOM05D003679 ORTHO05D004265 9.9e-126 455.3 800 45.1
Haze_13962 Corylus avellana HOM05D003679 ORTHO05D004265 1.3e-125 454.9 832 44.2
arahy.Tifrunner.gnm1.ann1.59G37Z Arachis hypogaea HOM05D003679 ORTHO05D004265 1.7e-125 454.5 800 44.9
Nn1g04396 Nelumbo nucifera HOM05D003679 ORTHO05D004265 2.9e-125 453.8 814 42.6
Gorai.009G262900 Gossypium raimondii HOM05D003679 ORTHO05D004265 4.9e-125 453.0 799 41.7
Lalb_Chr03g0033781 Lupinus albus HOM05D003679 ORTHO05D004265 4.9e-125 453.0 796 44.2
SalBow7G3862 Salvia bowleyana HOM05D003679 ORTHO05D004265 4.2e-124 449.9 796 43.3
Solyc11g042990.2 Solanum lycopersicum HOM05D003679 ORTHO05D004265 4.2e-124 449.9 807 44.2
Gohir.D05G251500 Gossypium hirsutum HOM05D003679 ORTHO05D004265 7.1e-124 449.1 799 41.6
TWI18G1229 Tripterygium wilfordii HOM05D003679 ORTHO05D004265 7.1e-124 449.1 798 45.1
PSO782G1226 Papaver somniferum HOM05D003679 ORTHO05D004265 1.2e-123 448.4 803 43.7
Sabra13G0083300 Salix brachista HOM05D003679 ORTHO05D004265 1.6e-123 448.0 816 45.3
Sabra13G0084600 Salix brachista HOM05D003679 ORTHO05D004265 1.6e-123 448.0 816 45.3
PSO063G5029 Papaver somniferum HOM05D003679 ORTHO05D004265 2.1e-123 447.6 803 44.5
Sopen11g019340 Solanum pennellii HOM05D003679 ORTHO05D004265 2.7e-123 447.2 807 44.2
Aa31LG7G6860 Aethionema arabicum HOM05D003679 ORTHO05D004265 6.0e-123 446.0 804 42.0
MBI07_g03169_MAGBIO Magnolia biondii HOM05D003679 ORTHO05D004265 1.9e-121 441.0 849 41.3
Hund03114 Selenicereus undatus HOM05D003679 ORTHO05D004265 1.9e-121 441.0 804 43.7
Psat7g228040 Pisum sativum HOM05D003679 ORTHO05D004265 3.3e-121 440.3 798 43.2
FAN06G3813 Fragaria x ananassa HOM05D003679 ORTHO05D004265 9.6e-121 438.7 801 43.6
CAN.G43.11 Capsicum annuum HOM05D003679 ORTHO05D004265 1.6e-120 438.0 801 44.1
MSTRG.25498 Avicennia marina HOM05D003679 ORTHO05D004265 4.8e-120 436.4 765 42.5
EL10Ac1g01279 Beta vulgaris HOM05D003679 ORTHO05D004265 6.2e-120 436.0 801 43.8
C05p21960 Brassica napus HOM05D003679 ORTHO05D004265 1.1e-119 435.3 808 43.3
THA.LOC104809755 Tarenaya hassleriana HOM05D003679 ORTHO05D004265 1.1e-119 435.3 799 42.6
Duzib177G0004 Durio zibethinus HOM05D003679 ORTHO05D004265 4.0e-119 433.3 799 42.1
BraA09t39677Z Brassica rapa HOM05D003679 ORTHO05D004265 6.9e-119 432.6 803 42.6
A09p41890 Brassica napus HOM05D003679 ORTHO05D004265 3.4e-118 430.3 806 42.4
BolC5t30892H Brassica oleracea HOM05D003679 ORTHO05D004265 3.4e-118 430.3 769 42.9
Peaxi162Scf00078g00824 Petunia axillaris HOM05D003679 ORTHO05D004265 5.8e-118 429.5 805 42.6
Sp1g20350 Schrenkiella parvula HOM05D003679 ORTHO05D004265 7.6e-118 429.1 807 42.4
THA.LOC104800081 Tarenaya hassleriana HOM05D003679 ORTHO05D004265 1.3e-117 428.3 804 41.7
PGR004G0725 Punica granatum HOM05D003679 ORTHO05D004265 1.9e-116 424.5 812 42.9
AT1G22870 Arabidopsis thaliana HOM05D003679 ORTHO05D004265 2.4e-116 424.1 807 42.1
CARHR023220 Cardamine hirsuta HOM05D003679 ORTHO05D004265 3.2e-116 423.7 802 42.3
AUR62013388 Chenopodium quinoa HOM05D003679 ORTHO05D004265 3.2e-116 423.7 802 42.4
Carub.0002s1826 Capsella rubella HOM05D003679 ORTHO05D004265 4.2e-116 423.3 798 42.1
Thhalv10018097m.g Eutrema salsugineum HOM05D003679 ORTHO05D004265 4.2e-116 423.3 765 41.6
Lj7C418G9 Lonicera japonica HOM05D003679 ORTHO05D004265 5.4e-116 422.9 799 42.9
ECA247G4018 Erigeron canadensis HOM05D003679 ORTHO05D004265 7.1e-116 422.5 802 40.9
BcaB07g32282 Brassica carinata HOM05D003679 ORTHO05D004265 1.2e-115 421.8 809 42.5
CARHR291300 Cardamine hirsuta HOM05D003679 ORTHO05D004265 4.6e-115 419.9 764 41.8
Thhalv10006737m.g Eutrema salsugineum HOM05D003679 ORTHO05D004265 7.8e-115 419.1 807 42.8
AT1G71410 Arabidopsis thaliana HOM05D003679 ORTHO05D004265 6.6e-114 416.0 764 41.1
Sp5g26570 Schrenkiella parvula HOM05D003679 ORTHO05D004265 6.6e-114 416.0 764 41.4
A02p17340 Brassica napus HOM05D003679 ORTHO05D004265 1.1e-113 415.2 801 42.2
Carub.0001s2237 Capsella rubella HOM05D003679 ORTHO05D004265 1.1e-113 415.2 775 41.5
CDE09G1378 Ceratophyllum demersum HOM05D003679 ORTHO05D004265 1.5e-113 414.8 717 42.0
BcaB05g24669 Brassica carinata HOM05D003679 ORTHO05D004265 3.3e-113 413.7 794 41.6
AL2G31070 Arabidopsis lyrata HOM05D003679 ORTHO05D004265 5.6e-113 412.9 764 40.8
BcaC03g15292 Brassica carinata HOM05D003679 ORTHO05D004265 1.3e-112 411.8 763 41.3
BraA07t31333Z Brassica rapa HOM05D003679 ORTHO05D004265 1.3e-112 411.8 699 42.6
Oeu028633.1 Olea europaea HOM05D003679 ORTHO05D004265 1.3e-112 411.8 779 42.7
A07p37690 Brassica napus HOM05D003679 ORTHO05D004265 2.8e-112 410.6 799 39.5
Aa31LG4G9170 Aethionema arabicum HOM05D003679 ORTHO05D004265 4.8e-112 409.8 797 41.2
BraA02t06781Z Brassica rapa HOM05D003679 ORTHO05D004265 6.2e-112 409.5 805 42.0
CDE02G0262 Ceratophyllum demersum HOM05D003679 ORTHO05D004265 8.1e-112 409.1 677 42.5
Cfa008063 Carpinus fangiana HOM05D003679 ORTHO05D004265 1.4e-111 408.3 842 42.3
C06p45570 Brassica napus HOM05D003679 ORTHO05D004265 6.9e-111 406.0 718 41.9
BolC6t39608H Brassica oleracea HOM05D003679 ORTHO05D004265 6.9e-111 406.0 718 41.9
BolC2t08949H Brassica oleracea HOM05D003679 ORTHO05D004265 1.2e-110 405.2 800 41.0
Zm00001eb162090 Zea mays HOM05D003679 ORTHO05D004265 5.8e-110 402.9 784 39.9
C02p28990 Brassica napus HOM05D003679 ORTHO05D004265 1.7e-109 401.4 768 41.0
ATR0602G033 Amborella trichopoda HOM05D003679 ORTHO05D004265 3.8e-109 400.2 804 39.2
HanXRQChr10g0298581 Helianthus annuus HOM05D003679 ORTHO05D004265 1.9e-108 397.9 696 42.5
Manes.18G113450 Manihot esculenta HOM05D003679 ORTHO05D004265 4.2e-108 396.7 812 41.1
unitig_37.g13075 Utricularia gibba HOM05D003679 ORTHO05D004265 5.4e-108 396.4 765 39.5
AUR62038539 Chenopodium quinoa HOM05D003679 ORTHO05D004265 7.9e-107 392.5 783 41.9
Lsat_1_v5_gn_1_1441 Lactuca sativa HOM05D003679 ORTHO05D004265 3.9e-106 390.2 659 42.3
Zm00001eb358200 Zea mays HOM05D003679 ORTHO05D004265 5.1e-106 389.8 780 37.9
Os01g0616100 Oryza sativa ssp. japonica HOM05D003679 ORTHO05D004265 5.6e-105 386.3 763 40.4
BcaC05g26193 Brassica carinata HOM05D003679 ORTHO05D004265 7.4e-105 386.0 781 41.6
Oeu028634.1 Olea europaea HOM05D003679 ORTHO05D004265 2.1e-104 384.4 807 40.6
HPP92_006341 Vanilla planifolia HOM05D003679 ORTHO05D004265 1.1e-103 382.1 586 43.9
Ah.05g170420 Amaranthus hybridus HOM05D003679 ORTHO05D004265 4.0e-103 380.2 798 39.1
Gohir.A08G230600 Gossypium hirsutum HOM05D003679 ORTHO05D004265 3.2e-100 370.5 495 45.9
Gorai.004G267700 Gossypium raimondii HOM05D003679 ORTHO05D004265 5.5e-100 369.8 495 46.1
Gohir.D08G251000 Gossypium hirsutum HOM05D003679 ORTHO05D004265 7.1e-100 369.4 495 46.1
Nitab4.5_0000213g0040 Nicotiana tabacum HOM05D003679 ORTHO05D004265 1.0e-98 365.5 443 51.5
Oeu028929.2 Olea europaea HOM05D003679 ORTHO05D004265 1.0e-98 365.5 448 50.4
BcaNung06593 Brassica carinata HOM05D003679 ORTHO05D004265 2.1e-96 357.8 467 49.7
Nitab4.5_0001430g0030 Nicotiana tabacum HOM05D003679 ORTHO05D004265 4.8e-96 356.7 804 38.9
Mapoly0061s0106 Marchantia polymorpha HOM05D003679 ORTHO05D004265 1.3e-90 338.6 691 38.4
SMO361G0595 Selaginella moellendorffii HOM05D003679 ORTHO05D004265 2.5e-89 334.3 612 38.2
Psat0s2790g0080 Pisum sativum HOM05D003679 ORTHO05D004265 4.8e-88 330.1 435 48.3
Pp3c9_3750 Physcomitrium patens HOM05D003679 ORTHO05D004265 4.5e-86 323.6 796 35.3
Cpa.g.sc21.95 Carica papaya HOM05D003679 ORTHO05D004265 2.2e-85 321.2 799 37.5
Gohir.A05G249800 Gossypium hirsutum HOM05D003679 ORTHO05D004265 5.0e-85 320.1 453 46.4
Pp3c15_10870 Physcomitrium patens HOM05D003679 ORTHO05D004265 6.1e-83 313.2 600 37.7
Nn1g09117 Nelumbo nucifera HOM05D003679 ORTHO05D004265 2.2e-77 294.7 551 42.1
TWI12G0838 Tripterygium wilfordii HOM05D003679 ORTHO05D004265 2.6e-73 281.2 405 45.2
Oeu028930.1 Olea europaea HOM05D003679 ORTHO05D004265 1.2e-70 272.3 392 45.9
BcaB03g14900 Brassica carinata HOM05D003679 ORTHO05D004265 8.0e-67 259.6 470 41.3
CBR_g8679 Chara braunii HOM05D003679 ORTHO05D004265 2.3e-66 258.1 615 32.0
FAN06G3504 Fragaria x ananassa HOM05D003679 ORTHO05D004265 6.7e-66 256.5 493 43.0
BcaC08g46576 Brassica carinata HOM05D003679 ORTHO05D004265 8.8e-66 256.1 492 40.2
Nn3g21334 Nelumbo nucifera HOM05D002338 ORTHO05D006102 4.4e-65 253.8 249 58.6
SGA_v2.0_scaffold24G10654 Striga asiatica HOM05D003679 ORTHO05D004265 1.9e-60 238.4 410 42.2
Psat0s2790g0120 Pisum sativum HOM05D003679 ORTHO05D004265 2.7e-54 218.0 373 41.0
SEGI_07550 Sequoiadendron giganteum HOM05D003679 ORTHO05D004265 6.5e-53 213.4 269 50.2
SEGI_25521 Sequoiadendron giganteum HOM05D003679 ORTHO05D004265 2.6e-49 201.4 487 37.6
Cc02_g28270 Coffea canephora HOM05D003679 ORTHO05D004265 1.1e-47 196.1 386 40.9
SHI16839 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-46 190.3 698 29.5
FAN06G3180 Fragaria x ananassa HOM05D003679 ORTHO05D004265 7.7e-46 189.9 190 57.9
Nn1g09907 Nelumbo nucifera HOM05D003679 ORTHO05D004265 1.6e-43 182.2 175 60.0
CBR_g22378 Chara braunii HOM05D003679 ORTHO05D004265 1.4e-42 179.1 507 30.2
Psat0s4467g0040 Pisum sativum HOM05D003679 ORTHO05D004265 1.8e-34 152.1 154 56.5
CBR_g30330 Chara braunii HOM05D003679 ORTHO05D004265 4.0e-34 151.0 410 28.5
Atru.chr13.2527 Acer truncatum HOM05D003679 ORTHO05D004265 2.0e-33 148.7 83 88.0
MCO04G527 Micromonas commoda HOM05D003679 ORTHO05D004265 6.8e-18 97.1 481 22.9
CARHR291270 Cardamine hirsuta HOM05D003679 ORTHO05D004265 1.7e-16 92.4 134 45.5
MD01G1055700 Malus domestica HOM05D003679 ORTHO05D004265 1.5e-09 69.3 40 82.5
Sabra13G0084400 Salix brachista HOM05D003679 ORTHO05D004265 3.8e-08 64.7 319 33.9
vmacro02184 Vaccinium macrocarpon HOM05D001453 ORTHO05D001444 1.1e-07 63.2 33 87.9
BcaC05g29463 Brassica carinata HOM05D003679 ORTHO05D004265 1.9e-07 62.4 40 72.5
C05p57620 Brassica napus HOM05D003679 ORTHO05D004265 1.9e-07 62.4 40 72.5
BolC5t34419H Brassica oleracea HOM05D003679 ORTHO05D004265 1.9e-07 62.4 40 72.5
PRCOL_00006428 Prasinoderma coloniale HOM05D003679 ORTHO05D004265 2.4e-07 62.0 172 29.1
vmacro13488 Vaccinium macrocarpon HOM05D002629 ORTHO05D003221 3.2e-07 61.6 54 61.1
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 9.3e-07 60.1 36 77.8
vmacro13309 Vaccinium macrocarpon HOM05D001826 ORTHO05D004184 1.6e-06 59.3 37 73.0
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 2.1e-06 58.9 33 84.8
vmacro16026 Vaccinium macrocarpon HOM05D017964 ORTHO05D023176 2.7e-06 58.5 35 77.1
vmacro06010 Vaccinium macrocarpon HOM05D000809 ORTHO05D001196 4.6e-06 57.8 32 84.4
vmacro02294 Vaccinium macrocarpon HOM05D001373 ORTHO05D001330 7.8e-06 57.0 39 71.8
vmacro18579 Vaccinium macrocarpon HOM05D003001 ORTHO05D003494 7.8e-06 57.0 43 65.1


User provided reference genes

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