Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10964 Vaccinium macrocarpon HOM05D001752 ORTHO05D003933 7.5e-104 380.6 196 100.0
vmacro07929 Vaccinium macrocarpon HOM05D001752 ORTHO05D003933 3.6e-58 228.8 148 83.1
Rhsim02G0159400 Rhododendron simsii HOM05D001752 ORTHO05D003933 3.4e-56 222.2 127 88.2
Actinidia39590 Actinidia chinensis HOM05D001752 ORTHO05D003933 7.6e-48 194.5 126 79.4
Dinv21526 Davidia involucrata HOM05D001752 ORTHO05D003933 1.1e-46 190.7 126 77.0
CSS0017352 Camellia sinensis var. sinensis HOM05D001752 ORTHO05D003933 3.2e-46 189.1 129 77.5
Atru.chr5.1010 Acer truncatum HOM05D001752 ORTHO05D003933 5.1e-44 181.8 126 72.2
Atru.chr10.1117 Acer truncatum HOM05D001752 ORTHO05D003933 1.9e-43 179.9 160 62.5
Cpa.g.sc17.47 Carica papaya HOM05D001752 ORTHO05D003933 4.3e-43 178.7 126 72.2
Ciclev10015336m.g Citrus clementina HOM05D001752 ORTHO05D003933 4.3e-43 178.7 124 75.8
Sabra10G0107100 Salix brachista HOM05D001752 ORTHO05D003933 4.3e-43 178.7 125 75.2
Potri.006G135300 Populus trichocarpa HOM05D001752 ORTHO05D003933 9.6e-43 177.6 125 74.4
MBI18_g11223_MAGBIO Magnolia biondii HOM05D001752 ORTHO05D003933 1.6e-42 176.8 126 71.4
ClCG01G024860 Citrullus lanatus HOM05D001752 ORTHO05D003933 2.1e-42 176.4 126 73.0
CDE11G1008 Ceratophyllum demersum HOM05D001752 ORTHO05D003933 4.8e-42 175.3 137 67.2
Manes.03G083900 Manihot esculenta HOM05D001752 ORTHO05D003933 4.8e-42 175.3 143 66.4
CDE05G2585 Ceratophyllum demersum HOM05D001752 ORTHO05D003933 8.1e-42 174.5 129 69.0
MELO3C007109.2 Cucumis melo HOM05D001752 ORTHO05D003933 8.1e-42 174.5 126 72.2
GSVIVG01019299001 Vitis vinifera HOM05D001752 ORTHO05D003933 1.4e-41 173.7 126 71.4
MD05G1280000 Malus domestica HOM05D001752 ORTHO05D003933 3.1e-41 172.6 127 72.4
MD10G1258500 Malus domestica HOM05D001752 ORTHO05D003933 3.1e-41 172.6 127 71.7
Nn3g20339 Nelumbo nucifera HOM05D001752 ORTHO05D003933 4.0e-41 172.2 126 71.4
Nn3g20342 Nelumbo nucifera HOM05D001752 ORTHO05D003933 4.0e-41 172.2 126 71.4
Potri.010G138800 Populus trichocarpa HOM05D001752 ORTHO05D003933 4.0e-41 172.2 132 70.5
Sabra06G0106100 Salix brachista HOM05D001752 ORTHO05D003933 4.0e-41 172.2 126 72.2
QL05p055167 Quercus lobata HOM05D001752 ORTHO05D003933 5.3e-41 171.8 126 70.6
SGA_v2.0_scaffold223G42822 Striga asiatica HOM05D001752 ORTHO05D003933 5.3e-41 171.8 126 71.4
TWI09G0900 Tripterygium wilfordii HOM05D001752 ORTHO05D003933 5.3e-41 171.8 124 71.8
CsaV3_6G051980 Cucumis sativus L. HOM05D001752 ORTHO05D003933 6.9e-41 171.4 126 71.4
Prupe.4G085300 Prunus persica HOM05D001752 ORTHO05D003933 6.9e-41 171.4 127 70.1
MSTRG.7509 Avicennia marina HOM05D001752 ORTHO05D003933 9.0e-41 171.0 126 72.2
Duzib235G0792 Durio zibethinus HOM05D001752 ORTHO05D003933 3.4e-40 169.1 166 57.8
Sed0012054 Sechium edule HOM05D001752 ORTHO05D003933 4.5e-40 168.7 126 71.4
Sed0015613 Sechium edule HOM05D001752 ORTHO05D003933 7.6e-40 167.9 126 69.0
SalBow8G0683 Salvia bowleyana HOM05D001752 ORTHO05D003933 1.7e-39 166.8 126 69.0
Solyc08g023470.3 Solanum lycopersicum HOM05D001752 ORTHO05D003933 2.9e-39 166.0 126 67.5
Sopen08g008630 Solanum pennellii HOM05D001752 ORTHO05D003933 2.9e-39 166.0 126 67.5
Actinidia32343 Actinidia chinensis HOM05D001752 ORTHO05D003933 3.8e-39 165.6 133 71.4
CAN.G1226.43 Capsicum annuum HOM05D001752 ORTHO05D003933 3.8e-39 165.6 126 69.0
Nitab4.5_0000315g0070 Nicotiana tabacum HOM05D001752 ORTHO05D003933 3.8e-39 165.6 126 68.3
Nitab4.5_0002071g0040 Nicotiana tabacum HOM05D001752 ORTHO05D003933 3.8e-39 165.6 126 68.3
CiPaw.10G088900 Carya illinoinensis HOM05D001752 ORTHO05D003933 6.4e-39 164.9 123 70.7
CANSAT35G1643 Cannabis sativa HOM05D001752 ORTHO05D003933 1.1e-38 164.1 127 70.1
ATR1098G155 Amborella trichopoda HOM05D001752 ORTHO05D003933 1.4e-38 163.7 127 66.1
Eucgr.E02451 Eucalyptus grandis HOM05D001752 ORTHO05D003933 3.2e-38 162.5 156 59.0
Lsat_1_v5_gn_7_49040 Lactuca sativa HOM05D001752 ORTHO05D003933 3.2e-38 162.5 126 71.4
MSTRG.16263 Avicennia marina HOM05D001752 ORTHO05D003933 4.2e-38 162.2 126 70.6
PGR004G1548 Punica granatum HOM05D001752 ORTHO05D003933 4.2e-38 162.2 130 66.9
Lj7A455G26 Lonicera japonica HOM05D001752 ORTHO05D003933 5.4e-38 161.8 136 65.4
THA.LOC104820663 Tarenaya hassleriana HOM05D001752 ORTHO05D003933 7.1e-38 161.4 126 68.3
Aqoxy5G01321 Aquilegia oxysepala HOM05D001752 ORTHO05D003933 9.3e-38 161.0 134 64.2
Peaxi162Scf00045g02426 Petunia axillaris HOM05D001752 ORTHO05D003933 9.3e-38 161.0 126 66.7
Haze_05658 Corylus avellana HOM05D001752 ORTHO05D003933 1.6e-37 160.2 178 53.9
Lalb_Chr16g0388861 Lupinus albus HOM05D001752 ORTHO05D003933 2.1e-37 159.8 120 72.5
RcHm_v2.0_Chr5g0014811 Rosa chinensis HOM05D001752 ORTHO05D003933 2.1e-37 159.8 132 67.4
ECA240G4835 Erigeron canadensis HOM05D001752 ORTHO05D010592 6.0e-37 158.3 126 69.8
HPP92_026527 Vanilla planifolia HOM05D001752 ORTHO05D003933 1.3e-36 157.1 126 65.1
Migut.G00061 Erythranthe guttata HOM05D001752 ORTHO05D003933 1.8e-36 156.8 149 61.7
Cc09_g03060 Coffea canephora HOM05D001752 ORTHO05D003933 5.1e-36 155.2 126 64.3
Sc19g0006420 Simmondsia chinensis HOM05D001752 ORTHO05D003933 8.7e-36 154.5 132 63.6
HPP92_026554 Vanilla planifolia HOM05D001752 ORTHO05D003933 8.7e-36 154.5 124 64.5
Lalb_Chr05g0226141 Lupinus albus HOM05D001752 ORTHO05D003933 1.1e-35 154.1 120 69.2
Lj4g0014792 Lotus japonicus HOM05D001752 ORTHO05D003933 1.5e-35 153.7 119 68.9
Sp4g16900 Schrenkiella parvula HOM05D001752 ORTHO05D003933 1.5e-35 153.7 125 63.2
Psat4g084000 Pisum sativum HOM05D001752 ORTHO05D003933 1.9e-35 153.3 146 58.9
BcaNung07261 Brassica carinata HOM05D001752 ORTHO05D003933 2.5e-35 152.9 121 65.3
Glyma.17G166000 Glycine max HOM05D001752 ORTHO05D003933 3.3e-35 152.5 118 68.6
Lalb_Chr09g0333981 Lupinus albus HOM05D001752 ORTHO05D003933 3.3e-35 152.5 120 67.5
THA.LOC104814312 Tarenaya hassleriana HOM05D001752 ORTHO05D003933 3.3e-35 152.5 133 62.4
HanXRQChr03g0064741 Helianthus annuus HOM05D001752 ORTHO05D003933 4.3e-35 152.1 126 67.5
BraA03t11176Z Brassica rapa HOM05D001752 ORTHO05D003933 5.6e-35 151.8 124 64.5
BraA05t20048Z Brassica rapa HOM05D001752 ORTHO05D003933 7.4e-35 151.4 121 64.5
FvH4_3g05080 Fragaria vesca HOM05D001752 ORTHO05D003933 7.4e-35 151.4 160 55.6
Glyma.05G100400 Glycine max HOM05D001752 ORTHO05D003933 7.4e-35 151.4 119 68.1
Sc25g0002910 Simmondsia chinensis HOM05D001752 ORTHO05D003933 9.6e-35 151.0 114 70.2
BcaC02g11539 Brassica carinata HOM05D001752 ORTHO05D003933 1.3e-34 150.6 121 64.5
C04p14150 Brassica napus HOM05D001752 ORTHO05D003933 1.3e-34 150.6 121 64.5
BolC3t14624H Brassica oleracea HOM05D001752 ORTHO05D003933 1.3e-34 150.6 124 64.5
Lj2g0024621 Lotus japonicus HOM05D001752 ORTHO05D003933 1.3e-34 150.6 119 67.2
CARHR128730 Cardamine hirsuta HOM05D001752 ORTHO05D003933 1.6e-34 150.2 125 62.4
Ca_22120_v3 Cicer arietinum L. HOM05D001752 ORTHO05D003933 2.1e-34 149.8 109 72.5
A03p19210 Brassica napus HOM05D001752 ORTHO05D003933 2.8e-34 149.4 111 68.5
BcaB02g09520 Brassica carinata HOM05D001752 ORTHO05D003933 4.8e-34 148.7 108 69.4
AL4G30620 Arabidopsis lyrata HOM05D001752 ORTHO05D003933 6.2e-34 148.3 125 62.4
Ca_24734_v3 Cicer arietinum L. HOM05D001752 ORTHO05D003933 6.2e-34 148.3 119 64.7
PSO170G1730 Papaver somniferum HOM05D001752 ORTHO05D003933 6.2e-34 148.3 115 68.7
TPR.G23860 Trifolium pratense HOM05D001752 ORTHO05D003933 6.2e-34 148.3 109 73.4
EL10Ac1g00430 Beta vulgaris HOM05D001752 ORTHO05D003933 8.1e-34 147.9 132 64.4
PSO063G4095 Papaver somniferum HOM05D001752 ORTHO05D003933 8.1e-34 147.9 135 61.5
Carub.0004s1632 Capsella rubella HOM05D001752 ORTHO05D003933 1.1e-33 147.5 125 61.6
AUR62002688 Chenopodium quinoa HOM05D001752 ORTHO05D003933 1.1e-33 147.5 132 62.1
A05p11030 Brassica napus HOM05D001752 ORTHO05D003933 1.4e-33 147.1 127 63.8
Rhsim05G0190400 Rhododendron simsii HOM05D001752 ORTHO05D003933 1.4e-33 147.1 79 93.7
AT2G34630 Arabidopsis thaliana HOM05D001752 ORTHO05D003933 1.8e-33 146.7 125 60.8
Thhalv10016708m.g Eutrema salsugineum HOM05D001752 ORTHO05D003933 1.8e-33 146.7 125 61.6
Lj9A714T21 Lonicera japonica HOM05D001752 ORTHO05D003933 1.8e-33 146.7 100 77.0
Medtr4g095055 Medicago truncatula HOM05D001752 ORTHO05D003933 1.8e-33 146.7 107 72.0
FAN16G1751 Fragaria x ananassa HOM05D001752 ORTHO05D003933 3.1e-33 146.0 178 51.7
TAR624G0447 Trochodendron aralioides HOM05D001752 ORTHO05D003933 3.1e-33 146.0 100 77.0
PSO541G2557 Papaver somniferum HOM05D001752 ORTHO05D003933 1.2e-32 144.1 126 60.3
FAN11G3589 Fragaria x ananassa HOM05D001752 ORTHO05D003933 1.5e-32 143.7 178 51.7
Gohir.D10G045000 Gossypium hirsutum HOM05D001752 ORTHO05D003933 1.5e-32 143.7 99 73.7
Gorai.011G047900 Gossypium raimondii HOM05D001752 ORTHO05D003933 1.5e-32 143.7 99 73.7
Aa31LG10G6720 Aethionema arabicum HOM05D001752 ORTHO05D003933 2.6e-32 142.9 126 61.9
Ah.11g041640 Amaranthus hybridus HOM05D001752 ORTHO05D003933 3.4e-32 142.5 124 62.1
PSO675G4072 Papaver somniferum HOM05D001752 ORTHO05D003933 3.4e-32 142.5 126 59.5
vmacro07928 Vaccinium macrocarpon HOM05D001752 ORTHO05D003933 3.4e-32 142.5 122 68.0
vmacro23235 Vaccinium macrocarpon HOM05D001752 ORTHO05D003933 3.4e-32 142.5 122 68.0
CSS0019388 Camellia sinensis var. sinensis HOM05D001752 ORTHO05D003933 5.8e-32 141.7 100 75.0
arahy.Tifrunner.gnm1.ann1.HGL34I Arachis hypogaea HOM05D001752 ORTHO05D003933 7.6e-32 141.4 146 54.1
Phvul.003G239100 Phaseolus vulgaris HOM05D001752 ORTHO05D003933 1.3e-31 140.6 119 64.7
TWI73G0250 Tripterygium wilfordii HOM05D001752 ORTHO05D003933 1.3e-31 140.6 98 74.5
COL.COLO4_31013 Corchorus olitorius HOM05D001752 ORTHO05D003933 2.2e-31 139.8 99 73.7
Hund10801 Selenicereus undatus HOM05D001752 ORTHO05D003933 3.8e-31 139.0 103 71.8
FAN25G3064 Fragaria x ananassa HOM05D001752 ORTHO05D003933 6.4e-31 138.3 155 54.2
unitig_26.g9767 Utricularia gibba HOM05D001752 ORTHO05D003933 1.4e-30 137.1 129 61.2
DCAR_019378 Daucus carota HOM05D001752 ORTHO05D003933 1.9e-30 136.7 113 66.4
Gohir.D07G109900 Gossypium hirsutum HOM05D001752 ORTHO05D003933 1.9e-30 136.7 134 60.4
Gorai.001G118100 Gossypium raimondii HOM05D001752 ORTHO05D003933 1.9e-30 136.7 134 60.4
Gohir.A07G106000 Gossypium hirsutum HOM05D001752 ORTHO05D003933 5.5e-30 135.2 134 60.4
BcaC01g05786 Brassica carinata HOM05D001752 ORTHO05D003933 7.1e-30 134.8 99 70.7
AUR62030144 Chenopodium quinoa HOM05D001752 ORTHO05D003933 7.1e-30 134.8 154 53.2
SHI24857 Sapria himalayana HOM05D001752 ORTHO05D003933 9.3e-30 134.4 98 73.5
THA.LOC104820661 Tarenaya hassleriana HOM05D001752 ORTHO05D003933 9.3e-30 134.4 124 59.7
Zm00001eb224620 Zea mays HOM05D001752 ORTHO05D003933 9.3e-30 134.4 126 57.1
C03p22410 Brassica napus HOM05D001752 ORTHO05D003933 1.2e-29 134.0 98 70.4
THA.LOC104820662 Tarenaya hassleriana HOM05D001752 ORTHO05D003933 1.2e-29 134.0 126 59.5
Thecc.09G296000 Theobroma cacao HOM05D001752 ORTHO05D003933 1.2e-29 134.0 98 72.4
Ah.02g110910 Amaranthus hybridus HOM05D001752 ORTHO05D003933 2.1e-29 133.3 128 59.4
arahy.Tifrunner.gnm1.ann1.2T8IP4 Arachis hypogaea HOM05D001752 ORTHO05D003933 2.1e-29 133.3 156 50.6
Os06g0678200 Oryza sativa ssp. japonica HOM05D001752 ORTHO05D003933 1.3e-28 130.6 126 57.9
Oeu030960.2 Olea europaea HOM05D001752 ORTHO05D003933 5.1e-28 128.6 93 73.1
PSO339G4160 Papaver somniferum HOM05D002898 ORTHO05D003933 1.5e-27 127.1 99 65.7
arahy.Tifrunner.gnm1.ann1.HABD5Z Arachis hypogaea HOM05D001752 ORTHO05D003933 2.5e-27 126.3 119 57.1
COL.COLO4_19227 Corchorus olitorius HOM05D001752 ORTHO05D003933 5.6e-27 125.2 100 67.0
AagrBONN_evm.TU.Sc2ySwM_344.3945 Anthoceros agrestis HOM05D001752 ORTHO05D003933 4.8e-26 122.1 122 57.4
PSO675G1934 Papaver somniferum HOM05D002898 ORTHO05D003933 4.8e-26 122.1 101 65.3
PSO339G0257 Papaver somniferum HOM05D002898 ORTHO05D003933 1.1e-25 120.9 105 64.8
Duzib192G0405 Durio zibethinus HOM05D001752 ORTHO05D003933 1.4e-25 120.6 112 62.5
PSO675G1617 Papaver somniferum HOM05D002898 ORTHO05D003933 4.0e-25 119.0 108 60.2
Pp3c8_7380 Physcomitrium patens HOM05D001752 ORTHO05D003933 9.0e-25 117.9 98 64.3
Thecc.06G144700 Theobroma cacao HOM05D001752 ORTHO05D003933 1.2e-24 117.5 75 81.3
Ciclev10015559m.g Citrus clementina HOM05D001752 ORTHO05D003933 2.6e-24 116.3 115 58.3
Atru.chr10.1119 Acer truncatum HOM05D001752 ORTHO05D003933 4.5e-24 115.5 101 61.4
Mapoly0043s0003 Marchantia polymorpha HOM05D001752 ORTHO05D003933 7.6e-24 114.8 99 61.6
MD05G1280200 Malus domestica HOM05D001752 ORTHO05D003933 1.7e-23 113.6 79 74.7
Thecc.06G144800 Theobroma cacao HOM05D001752 ORTHO05D003933 1.7e-23 113.6 104 58.7
Gohir.A10G043800 Gossypium hirsutum HOM05D001752 ORTHO05D003933 2.9e-23 112.8 75 78.7
Pp3c3_31610 Physcomitrium patens HOM05D001752 ORTHO05D003933 1.1e-22 110.9 108 57.4
CiPaw.09G120000 Carya illinoinensis HOM05D001752 ORTHO05D003933 5.5e-22 108.6 75 77.3
arahy.Tifrunner.gnm1.ann1.HG5XTQ Arachis hypogaea HOM05D001752 ORTHO05D003933 2.1e-21 106.7 91 61.5
CBR_g47123 Chara braunii HOM05D001752 ORTHO05D003933 1.3e-20 104.0 143 46.9
PRCOL_00003890 Prasinoderma coloniale HOM05D001752 ORTHO05D003933 2.3e-20 103.2 94 59.6
COL.COLO4_31015 Corchorus olitorius HOM05D001752 ORTHO05D003933 3.9e-20 102.4 104 51.0
SEGI_04874 Sequoiadendron giganteum HOM05D001752 ORTHO05D003933 5.7e-19 98.6 104 49.0
Rhsim07G0216500 Rhododendron simsii HOM05D001752 ORTHO05D003933 4.8e-18 95.5 116 54.3
Zm00001eb224640 Zea mays HOM05D001752 ORTHO05D003933 6.3e-18 95.1 78 61.5
PSO063G5674 Papaver somniferum HOM05D001752 ORTHO05D003933 8.2e-18 94.7 92 55.4
PSO063G0049 Papaver somniferum HOM05D001752 ORTHO05D003933 1.4e-17 94.0 106 50.9
SMO141G0186 Selaginella moellendorffii HOM05D001752 ORTHO05D003933 1.4e-17 94.0 82 61.0
Cre12.g511700 Chlamydomonas reinhardtii HOM05D001752 ORTHO05D003933 3.4e-16 89.4 99 45.5
Duzib168G0633 Durio zibethinus HOM05D001752 ORTHO05D003933 1.7e-15 87.0 95 55.8
MCO03G218 Micromonas commoda HOM05D001752 ORTHO05D003933 4.2e-14 82.4 81 55.6
BcaB06g28788 Brassica carinata HOM05D001752 ORTHO05D003933 7.2e-14 81.6 111 44.1
Lsat_1_v5_gn_2_30340 Lactuca sativa HOM05D005112 ORTHO05D006681 9.7e-11 71.2 44 77.3
Os08g0193100 Oryza sativa ssp. japonica HOM05D001752 ORTHO05D003933 5.3e-09 65.5 53 60.4


User provided reference genes

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