Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 1.3e-175 619.8 350 100.0
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 9.8e-123 444.1 340 75.6
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 7.0e-113 411.4 349 70.8
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 6.2e-109 398.3 346 71.7
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 2.6e-107 392.9 346 72.0
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 1.6e-104 383.6 349 66.5
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 4.6e-104 382.1 350 71.7
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 3.9e-103 379.0 337 69.7
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 6.6e-103 378.3 337 69.4
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 1.1e-102 377.5 347 70.6
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 5.6e-102 375.2 341 70.1
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 5.6e-102 375.2 364 64.0
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 1.2e-101 374.0 337 70.6
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 3.6e-101 372.5 357 64.1
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 6.2e-101 371.7 286 79.4
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 8.1e-101 371.3 346 65.3
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 1.1e-100 370.9 344 66.9
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 1.8e-100 370.2 344 68.3
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 6.8e-100 368.2 342 68.7
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 1.2e-99 367.5 357 64.7
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 3.4e-99 365.9 339 71.1
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 4.4e-99 365.5 347 62.8
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 7.6e-99 364.8 359 67.7
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 2.9e-98 362.8 339 65.8
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 3.8e-98 362.5 349 69.1
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 6.4e-98 361.7 346 66.2
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 1.1e-97 360.9 384 60.7
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 1.1e-97 360.9 346 67.9
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.4e-97 360.5 347 62.8
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 1.4e-97 360.5 351 67.0
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 3.2e-97 359.4 364 65.9
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 4.2e-97 359.0 342 66.7
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 5.4e-97 358.6 347 62.5
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.1e-96 356.7 348 60.9
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 1.3e-95 354.0 362 61.9
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 1.7e-95 353.6 282 74.5
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 5.1e-95 352.1 349 66.5
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 1.5e-94 350.5 347 62.5
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 3.3e-94 349.4 341 65.4
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 2.1e-93 346.7 350 66.9
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 3.6e-93 345.9 346 69.4
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 1.8e-92 343.6 341 61.9
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 1.8e-92 343.6 357 63.0
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 5.8e-91 338.6 351 58.1
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 5.8e-91 338.6 362 63.5
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 1.7e-90 337.0 352 57.7
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 7.1e-89 331.6 349 62.8
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 4.6e-88 328.9 350 64.3
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 1.5e-86 323.9 349 58.5
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 2.5e-86 323.2 349 58.5
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 2.5e-86 323.2 348 60.3
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 7.3e-86 321.6 338 62.4
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 9.6e-86 321.2 347 58.2
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 1.3e-85 320.9 347 58.2
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 1.3e-85 320.9 347 58.2
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 1.3e-85 320.9 353 59.5
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 3.6e-85 319.3 274 66.4
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 4.8e-85 318.9 392 57.7
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 6.2e-85 318.5 352 56.0
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 8.1e-85 318.2 347 57.9
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 8.1e-85 318.2 351 63.8
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 8.1e-85 318.2 347 58.5
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 1.4e-84 317.4 349 55.9
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 1.4e-84 317.4 348 59.8
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 9.0e-84 314.7 343 60.6
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 1.2e-83 314.3 348 63.5
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 7.6e-83 311.6 342 63.2
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 2.2e-82 310.1 339 59.9
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 6.4e-82 308.5 348 58.3
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 1.4e-81 307.4 365 58.1
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 3.2e-81 306.2 377 54.4
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 4.2e-81 305.8 340 57.9
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 7.1e-81 305.1 354 57.6
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 9.3e-81 304.7 352 54.0
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 9.3e-81 304.7 337 61.4
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 4.6e-80 302.4 284 71.5
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 1.9e-78 297.0 353 56.4
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 9.6e-78 294.7 399 53.9
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 2.4e-76 290.0 350 57.4
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 1.5e-75 287.3 353 59.5
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 8.7e-71 271.6 337 54.3
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 8.7e-71 271.6 325 60.9
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 1.1e-70 271.2 282 61.0
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 1.3e-69 267.7 349 49.6
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 1.1e-68 264.6 355 54.1
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 2.0e-67 260.4 348 56.6
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 2.6e-67 260.0 380 51.8
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 1.1e-65 254.6 344 52.0
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 6.0e-64 248.8 337 48.7
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 1.9e-62 243.8 252 68.7
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 5.7e-62 242.3 353 47.3
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 1.6e-61 240.7 346 48.0
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 5.7e-54 215.7 332 45.5
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 4.2e-49 199.5 310 50.0
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 2.7e-48 196.8 348 46.3
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 1.8e-47 194.1 298 47.0
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 9.7e-46 188.3 284 45.8
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 4.8e-45 186.0 236 60.6
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 1.8e-44 184.1 343 45.5
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 4.1e-44 183.0 270 52.6
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 1.4e-41 174.5 179 55.9
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 2.7e-40 170.2 394 40.4
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 4.4e-38 162.9 123 74.8
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.4e-36 157.9 150 65.3
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 1.8e-36 157.5 164 54.9
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 1.7e-34 151.0 342 40.4
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.2e-32 144.8 173 57.8
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 2.6e-22 110.5 176 58.5
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 1.1e-20 105.1 64 82.8
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 1.6e-19 101.3 98 64.3
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 1.6e-19 101.3 98 64.3
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 2.0e-19 100.9 71 81.7
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 2.1e-16 90.9 297 36.7
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 3.4e-14 83.6 80 62.5
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 5.4e-12 76.3 84 58.3
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 5.9e-11 72.8 120 40.0
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 2.9e-10 70.5 55 63.6
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 1.0e-07 62.0 299 30.8
Cfa024449 Carpinus fangiana HOM05D006889 ORTHO05D008614 1.2e-06 58.5 39 59.0


User provided reference genes

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