Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10766 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 1.1e-124 449.9 219 100.0
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 4.8e-43 178.7 154 62.3
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 3.1e-26 122.9 202 40.6
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 2.3e-21 106.7 205 38.5
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 4.4e-20 102.4 204 38.7
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 8.3e-19 98.2 214 36.9
Peaxi162Scf00097g02317 Petunia axillaris HOM05D006757 ORTHO05D004651 1.2e-14 84.3 135 38.5
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 8.0e-14 81.6 127 40.2
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 1.4e-13 80.9 205 33.7
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.0e-13 79.7 128 37.5
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.0e-13 79.7 128 37.5
Ciclev10006110m.g Citrus clementina HOM05D006757 ORTHO05D004651 5.2e-13 79.0 217 32.3
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 5.2e-13 79.0 128 38.3
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 5.2e-13 79.0 126 38.1
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 6.8e-13 78.6 169 35.5
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 8.8e-13 78.2 128 36.7
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 2.6e-12 76.6 127 38.6
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 2.6e-12 76.6 198 33.3
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.4e-12 76.3 125 36.8
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 4.4e-12 75.9 127 36.2
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 5.7e-12 75.5 169 30.2
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 7.5e-12 75.1 187 33.2
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 1.7e-11 73.9 128 36.7
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 1.7e-11 73.9 198 32.3
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 1.7e-11 73.9 129 34.9
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 1.7e-11 73.9 129 34.9
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 1.7e-11 73.9 133 36.1
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 2.2e-11 73.6 185 33.0
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 4.9e-11 72.4 168 32.1
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 6.3e-11 72.0 133 34.6
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 6.3e-11 72.0 133 34.6
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 8.3e-11 71.6 133 34.6
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 8.3e-11 71.6 203 29.6
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 2.4e-10 70.1 127 37.0
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 4.5e-09 65.9 129 34.1
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 5.9e-09 65.5 171 29.2
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 1.7e-08 63.9 164 29.9
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 1.7e-08 63.9 154 29.9
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 3.8e-08 62.8 186 30.1
Hma1.2p1_0933F.1_g238390 Hydrangea macrophylla HOM05D006757 ORTHO05D034208 3.8e-08 62.8 54 59.3
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 6.6e-08 62.0 192 27.6
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 6.6e-08 62.0 164 27.4
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 6.6e-08 62.0 128 35.9
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 8.6e-08 61.6 205 24.9
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 1.1e-07 61.2 172 28.5
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 1.5e-07 60.8 203 26.6
Cc11_g03350 Coffea canephora HOM05D006757 ORTHO05D004651 1.9e-07 60.5 40 70.0
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 4.3e-07 59.3 159 30.2
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 7.3e-07 58.5 68 42.6
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 9.5e-07 58.2 105 37.1
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 1.2e-06 57.8 109 37.6
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 1.2e-06 57.8 198 29.3
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 2.8e-06 56.6 127 28.3
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 2.8e-06 56.6 130 32.3
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 4.7e-06 55.8 75 46.7
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 8.0e-06 55.1 36 69.4
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 8.0e-06 55.1 176 29.0


User provided reference genes

Program Settings