Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10679 Vaccinium macrocarpon HOM05D003895 ORTHO05D004723 0.0e+00 1590.5 778 100.0
vmacro22441 Vaccinium macrocarpon HOM05D003895 ORTHO05D004723 0.0e+00 1590.5 778 100.0
vmacro13870 Vaccinium macrocarpon HOM05D003895 ORTHO05D004723 0.0e+00 1495.3 778 94.5
Rhsim07G0079800 Rhododendron simsii HOM05D003895 ORTHO05D004723 0.0e+00 1388.2 778 87.5
CSS0003453 Camellia sinensis var. sinensis HOM05D003895 ORTHO05D004723 0.0e+00 1359.7 778 85.3
CSS0024936 Camellia sinensis var. sinensis HOM05D003895 ORTHO05D004723 0.0e+00 1349.7 778 85.0
Actinidia04389 Actinidia chinensis HOM05D003895 ORTHO05D004723 0.0e+00 1326.6 779 83.6
Manes.02G005900 Manihot esculenta HOM05D003895 ORTHO05D004723 0.0e+00 1305.8 779 81.3
MSTRG.13762 Avicennia marina HOM05D003895 ORTHO05D004723 0.0e+00 1305.0 779 81.4
Cpa.g.sc15.11 Carica papaya HOM05D003895 ORTHO05D004723 0.0e+00 1300.0 781 81.3
Migut.E00651 Erythranthe guttata HOM05D003895 ORTHO05D004723 0.0e+00 1297.3 779 80.4
Oeu009988.1 Olea europaea HOM05D003895 ORTHO05D004723 0.0e+00 1297.3 779 81.0
Solyc08g082830.3 Solanum lycopersicum HOM05D003895 ORTHO05D004723 0.0e+00 1295.4 779 80.9
Thecc.03G303200 Theobroma cacao HOM05D003895 ORTHO05D004723 0.0e+00 1295.4 780 81.0
PGSC0003DMG400012128 Solanum tuberosum HOM05D003895 ORTHO05D004723 0.0e+00 1294.3 779 80.7
TAR629G1064 Trochodendron aralioides HOM05D003895 ORTHO05D004723 0.0e+00 1294.3 781 81.4
Potri.003G143700 Populus trichocarpa HOM05D003895 ORTHO05D004723 0.0e+00 1293.9 780 80.9
Cc05_g02370 Coffea canephora HOM05D003895 ORTHO05D004723 0.0e+00 1293.1 779 80.4
Nitab4.5_0002439g0120 Nicotiana tabacum HOM05D003895 ORTHO05D004723 0.0e+00 1293.1 779 81.0
CAN.G567.61 Capsicum annuum HOM05D003895 ORTHO05D004723 0.0e+00 1290.8 779 80.6
PGR042G2513 Punica granatum HOM05D003895 ORTHO05D004723 0.0e+00 1288.9 781 79.9
SalBow2G2362 Salvia bowleyana HOM05D003895 ORTHO05D004723 0.0e+00 1288.9 779 80.4
TWI60G1173 Tripterygium wilfordii HOM05D003895 ORTHO05D004723 0.0e+00 1288.5 779 80.6
Ciclev10019024m.g Citrus clementina HOM05D003895 ORTHO05D004723 0.0e+00 1287.7 779 79.6
Nitab4.5_0002367g0210 Nicotiana tabacum HOM05D003895 ORTHO05D004723 0.0e+00 1286.6 771 81.5
Potri.001G087400 Populus trichocarpa HOM05D003895 ORTHO05D004723 0.0e+00 1286.6 779 80.6
CiPaw.11G115900 Carya illinoinensis HOM05D003895 ORTHO05D004723 0.0e+00 1283.9 779 79.6
Duzib068G0704 Durio zibethinus HOM05D003895 ORTHO05D004723 0.0e+00 1283.9 780 80.5
Prupe.5G126000 Prunus persica HOM05D003895 ORTHO05D004723 0.0e+00 1282.7 781 79.5
Gorai.004G131300 Gossypium raimondii HOM05D003895 ORTHO05D004723 0.0e+00 1282.3 779 80.6
Ciclev10024991m.g Citrus clementina HOM05D003895 ORTHO05D004723 0.0e+00 1281.9 779 79.5
FvH4_5g11490 Fragaria vesca HOM05D003895 ORTHO05D004723 0.0e+00 1281.5 778 79.2
Cfa011961 Carpinus fangiana HOM05D003895 ORTHO05D004723 0.0e+00 1281.2 781 79.9
Cc08_g16460 Coffea canephora HOM05D003895 ORTHO05D004723 0.0e+00 1281.2 779 79.5
FAN18G2619 Fragaria x ananassa HOM05D003895 ORTHO05D004723 0.0e+00 1280.4 778 79.0
FAN18G3428 Fragaria x ananassa HOM05D003895 ORTHO05D004723 0.0e+00 1280.4 778 79.0
FAN04G2440 Fragaria x ananassa HOM05D003895 ORTHO05D004723 0.0e+00 1280.0 780 79.1
FAN08G0955 Fragaria x ananassa HOM05D003895 ORTHO05D004723 0.0e+00 1278.8 780 78.8
QL02p029300 Quercus lobata HOM05D003895 ORTHO05D004723 0.0e+00 1278.8 780 80.3
DCAR_006502 Daucus carota HOM05D003895 ORTHO05D004723 0.0e+00 1278.5 779 78.9
Sabra01G0063700 Salix brachista HOM05D003895 ORTHO05D004723 0.0e+00 1278.1 779 80.5
Gohir.D08G124600 Gossypium hirsutum HOM05D003895 ORTHO05D004723 0.0e+00 1277.3 779 80.4
RcHm_v2.0_Chr7g0186311 Rosa chinensis HOM05D003895 ORTHO05D004723 0.0e+00 1276.5 780 78.8
Nn3g20296 Nelumbo nucifera HOM05D003895 ORTHO05D004723 0.0e+00 1273.5 779 80.4
MD14G1134200 Malus domestica HOM05D003895 ORTHO05D004723 0.0e+00 1272.3 781 79.0
Aqoxy2G01051 Aquilegia oxysepala HOM05D003895 ORTHO05D004723 0.0e+00 1271.5 781 79.9
MD06G1113100 Malus domestica HOM05D003895 ORTHO05D004723 0.0e+00 1269.6 781 78.6
PSO170G0459 Papaver somniferum HOM05D003895 ORTHO05D004723 0.0e+00 1267.3 782 78.8
HanXRQChr06g0166321 Helianthus annuus HOM05D003895 ORTHO05D004723 0.0e+00 1266.5 779 80.0
Eucgr.E01025 Eucalyptus grandis HOM05D003895 ORTHO05D004723 0.0e+00 1266.1 780 78.3
Lalb_Chr16g0390761 Lupinus albus HOM05D003895 ORTHO05D004723 0.0e+00 1266.1 779 79.3
Sabra03G0104100 Salix brachista HOM05D003895 ORTHO05D004723 0.0e+00 1264.6 823 76.4
CANSAT54G0301 Cannabis sativa HOM05D003895 ORTHO05D004723 0.0e+00 1263.8 780 78.2
ECA240G1010 Erigeron canadensis HOM05D003895 ORTHO05D004723 0.0e+00 1262.3 780 79.4
HanXRQChr03g0083671 Helianthus annuus HOM05D003895 ORTHO05D004723 0.0e+00 1261.5 780 79.6
MELO3C005756.2 Cucumis melo HOM05D003895 ORTHO05D004723 0.0e+00 1261.1 779 79.1
Haze_09120 Corylus avellana HOM05D003895 ORTHO05D004723 0.0e+00 1256.1 796 77.9
Sopen08g031060 Solanum pennellii HOM05D003895 ORTHO05D004723 0.0e+00 1256.1 744 81.7
Oeu059576.4 Olea europaea HOM05D003895 ORTHO05D004723 0.0e+00 1253.0 831 75.1
COL.COLO4_10753 Corchorus olitorius HOM05D003895 ORTHO05D004723 0.0e+00 1251.9 779 79.3
Ca_17453_v3 Cicer arietinum L. HOM05D003895 ORTHO05D004723 0.0e+00 1250.3 779 78.2
Hund14202 Selenicereus undatus HOM05D003895 ORTHO05D004723 0.0e+00 1250.3 781 78.0
THA.LOC104823616 Tarenaya hassleriana HOM05D003895 ORTHO05D004723 0.0e+00 1248.4 779 78.2
Lj4g0018300 Lotus japonicus HOM05D003895 ORTHO05D004723 0.0e+00 1246.5 780 77.7
Aa31LG2G1550 Aethionema arabicum HOM05D003895 ORTHO05D004723 0.0e+00 1242.3 779 77.9
Psat7g023560 Pisum sativum HOM05D003895 ORTHO05D004723 0.0e+00 1241.9 779 77.3
GSVIVG01019608001 Vitis vinifera HOM05D003895 ORTHO05D004723 0.0e+00 1240.3 780 77.8
Lj4g0016220 Lotus japonicus HOM05D003895 ORTHO05D004723 0.0e+00 1237.2 780 77.1
Glyma.05G219500 Glycine max HOM05D003895 ORTHO05D004723 0.0e+00 1236.5 781 76.8
Medtr8g099885 Medicago truncatula HOM05D003895 ORTHO05D004723 0.0e+00 1233.4 781 76.6
arahy.Tifrunner.gnm1.ann1.68E5M7 Arachis hypogaea HOM05D003895 ORTHO05D004723 0.0e+00 1232.6 781 76.7
Lj2C160T5 Lonicera japonica HOM05D003895 ORTHO05D004723 0.0e+00 1231.5 779 78.4
Thhalv10011266m.g Eutrema salsugineum HOM05D003895 ORTHO05D004723 0.0e+00 1231.1 779 76.3
TPR.G3395 Trifolium pratense HOM05D003895 ORTHO05D004723 0.0e+00 1230.3 781 76.3
Phvul.002G328900 Phaseolus vulgaris HOM05D003895 ORTHO05D004723 0.0e+00 1224.5 781 75.9
TPR.G18245 Trifolium pratense HOM05D003895 ORTHO05D004723 0.0e+00 1224.5 781 76.6
Carub.0001s4358 Capsella rubella HOM05D003895 ORTHO05D004723 0.0e+00 1223.0 779 76.1
arahy.Tifrunner.gnm1.ann1.M62N24 Arachis hypogaea HOM05D003895 ORTHO05D004723 0.0e+00 1221.5 776 76.4
BolC6t36080H Brassica oleracea HOM05D003895 ORTHO05D004723 0.0e+00 1219.5 779 75.6
Sp1g40750 Schrenkiella parvula HOM05D003895 ORTHO05D004723 0.0e+00 1219.1 780 75.5
CARHR044680 Cardamine hirsuta HOM05D003895 ORTHO05D004723 0.0e+00 1218.8 779 75.6
C06p10070 Brassica napus HOM05D003895 ORTHO05D004723 0.0e+00 1216.8 779 75.6
ClCG01G001820 Citrullus lanatus HOM05D003895 ORTHO05D004723 0.0e+00 1215.7 877 70.5
BcaC08g43605 Brassica carinata HOM05D003895 ORTHO05D004723 0.0e+00 1214.1 779 75.6
BcaB07g33238 Brassica carinata HOM05D003895 ORTHO05D004723 0.0e+00 1213.4 779 75.5
AL1G63080 Arabidopsis lyrata HOM05D003895 ORTHO05D004723 0.0e+00 1212.6 779 75.6
BcaC01g01456 Brassica carinata HOM05D003895 ORTHO05D004723 0.0e+00 1212.6 781 75.5
BraA06t23255Z Brassica rapa HOM05D003895 ORTHO05D004723 0.0e+00 1212.2 779 75.1
A06p00400 Brassica napus HOM05D003895 ORTHO05D004723 0.0e+00 1210.7 779 75.0
Peaxi162Scf00074g00431 Petunia axillaris HOM05D003895 ORTHO05D004723 0.0e+00 1210.7 779 77.7
AT1G55090 Arabidopsis thaliana HOM05D003895 ORTHO05D004723 0.0e+00 1210.3 779 75.5
VMungo0251G3777 Vigna mungo HOM05D003895 ORTHO05D004723 0.0e+00 1209.1 779 76.0
A08p01020 Brassica napus HOM05D003895 ORTHO05D004723 0.0e+00 1208.4 781 75.0
BcaB04g17002 Brassica carinata HOM05D003895 ORTHO05D004723 0.0e+00 1207.6 779 75.2
EL10Ac5g12963 Beta vulgaris HOM05D003895 ORTHO05D004723 0.0e+00 1197.6 745 77.0
Lsat_1_v5_gn_6_83601 Lactuca sativa HOM05D003895 ORTHO05D004723 0.0e+00 1191.0 779 75.7
Sc01g0010470 Simmondsia chinensis HOM05D003895 ORTHO05D004723 0.0e+00 1189.9 710 80.6
Psat7g023520 Pisum sativum HOM05D003895 ORTHO05D004723 0.0e+00 1189.1 775 74.1
AUR62029097 Chenopodium quinoa HOM05D003895 ORTHO05D004723 0.0e+00 1188.3 783 73.7
AUR62015016 Chenopodium quinoa HOM05D003895 ORTHO05D004723 0.0e+00 1181.4 798 72.4
unitig_21.g20891 Utricularia gibba HOM05D003895 ORTHO05D004723 0.0e+00 1180.6 782 74.6
PSO339G2482 Papaver somniferum HOM05D003895 ORTHO05D004723 0.0e+00 1179.9 780 73.6
PSO017G1958 Papaver somniferum HOM05D003895 ORTHO05D004723 0.0e+00 1171.4 782 74.4
C03p92220 Brassica napus HOM05D003895 ORTHO05D004723 0.0e+00 1171.0 793 72.9
BolC3t21537H Brassica oleracea HOM05D003895 ORTHO05D004723 0.0e+00 1170.2 793 72.9
SGA_v2.0_scaffold295G47513 Striga asiatica HOM05D003895 ORTHO05D004723 0.0e+00 1169.5 779 74.6
BraA08t32154Z Brassica rapa HOM05D003895 ORTHO05D004723 0.0e+00 1167.5 792 72.7
Glyma.08G025800 Glycine max HOM05D003895 ORTHO05D004723 0.0e+00 1149.8 706 78.9
CsaV3_5G001970 Cucumis sativus L. HOM05D003895 ORTHO05D004723 0.0e+00 1140.6 714 78.0
MBI02_g10555_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 0.0e+00 1137.1 789 70.8
TPR.G3413 Trifolium pratense HOM05D003895 ORTHO05D004723 0.0e+00 1135.6 742 73.3
Zm00001eb094700 Zea mays HOM05D003895 ORTHO05D004723 0.0e+00 1130.5 782 71.4
Sed0021355 Sechium edule HOM05D003895 ORTHO05D004723 0.0e+00 1108.6 663 81.9
Hma1.2p1_1835F.1_g304665 Hydrangea macrophylla HOM05D003895 ORTHO05D004723 0.0e+00 1108.2 663 81.7
HPP92_025338 Vanilla planifolia HOM05D003895 ORTHO05D004723 0.0e+00 1108.2 754 71.1
ATR1098G082 Amborella trichopoda HOM05D003895 ORTHO05D004723 0.0e+00 1100.9 781 69.5
EL10Ac5g12472 Beta vulgaris HOM05D003895 ORTHO05D004723 0.0e+00 1100.5 743 71.3
Dinv34692 Davidia involucrata HOM05D003895 ORTHO05D004723 3.7e-311 1071.2 632 83.1
SEGI_31460 Sequoiadendron giganteum HOM05D003895 ORTHO05D004723 5.8e-309 1063.9 780 67.1
FAN13G0619 Fragaria x ananassa HOM05D003895 ORTHO05D004723 1.2e-306 1056.2 780 68.5
Manes.02G005800 Manihot esculenta HOM05D003895 ORTHO05D004723 3.8e-300 1034.6 752 67.6
Ah.12g052950 Amaranthus hybridus HOM05D003895 ORTHO05D004723 2.4e-299 1031.9 798 66.4
Mapoly0035s0052 Marchantia polymorpha HOM05D003895 ORTHO05D004723 1.6e-274 949.5 783 60.4
SMO174G0028 Selaginella moellendorffii HOM05D003895 ORTHO05D004723 3.0e-273 945.3 780 59.6
CBR_g19728 Chara braunii HOM05D003895 ORTHO05D004723 1.4e-270 936.4 771 59.7
AUR62019884 Chenopodium quinoa HOM05D003895 ORTHO05D004723 1.8e-270 936.0 748 63.6
Os07g0167100 Oryza sativa ssp. japonica HOM05D003895 ORTHO05D004723 1.1e-254 883.6 567 75.5
Gohir.A08G111660 Gossypium hirsutum HOM05D003895 ORTHO05D004723 5.3e-254 881.3 506 84.8
MCO17G006 Micromonas commoda HOM05D003895 ORTHO05D004723 9.8e-248 860.5 737 57.4
AagrBONN_evm.TU.Sc2ySwM_228.4970 Anthoceros agrestis HOM05D003895 ORTHO05D004723 1.4e-246 856.7 703 60.0
Pp3c17_21910 Physcomitrium patens HOM05D003895 ORTHO05D004723 2.3e-244 849.4 716 58.8
SMO358G0326 Selaginella moellendorffii HOM05D003895 ORTHO05D004723 1.4e-238 830.1 744 55.4
PRCOL_00000896 Prasinoderma coloniale HOM05D003895 ORTHO05D004723 5.2e-225 785.0 749 53.4
Migut.E01630 Erythranthe guttata HOM05D003895 ORTHO05D004723 9.8e-224 780.8 549 70.5
Cre10.g435250 Chlamydomonas reinhardtii HOM05D003895 ORTHO05D004723 3.9e-220 768.8 803 50.9
Hma1.2p1_0077F.1_g039630 Hydrangea macrophylla HOM05D003895 ORTHO05D004723 4.3e-211 738.8 464 78.4
Cfa024512 Carpinus fangiana HOM05D003895 ORTHO05D004723 3.0e-196 689.5 748 48.9
MBI02_g43672_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 2.0e-176 623.6 469 67.4
Aqoxy456s001 Aquilegia oxysepala HOM05D003895 ORTHO05D004723 9.4e-150 535.0 303 86.8
PSO210G1536 Papaver somniferum HOM05D003895 ORTHO05D004723 2.1e-149 533.9 424 62.7
ECA246G1101 Erigeron canadensis HOM05D003895 ORTHO05D004723 1.1e-145 521.5 311 82.3
MBI05_g40947_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 9.1e-145 518.5 358 71.2
AUR62007020 Chenopodium quinoa HOM05D003895 ORTHO05D004723 1.2e-144 518.1 317 78.5
Haze_09105 Corylus avellana HOM05D003895 ORTHO05D004723 1.6e-136 491.1 349 73.6
MBI15_g06349_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 1.1e-126 458.4 341 67.2
MBI05_g43497_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 6.4e-114 416.0 300 68.3
SalBow2G1745 Salvia bowleyana HOM05D003895 ORTHO05D004723 8.9e-108 395.6 311 63.7
MBI05_g40946_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 1.4e-89 335.1 209 75.1
Gohir.A08G111640 Gossypium hirsutum HOM05D003895 ORTHO05D004723 2.1e-85 321.2 230 67.8
Psat7g023400 Pisum sativum HOM05D003895 ORTHO05D004723 7.1e-81 306.2 405 47.2
arahy.Tifrunner.gnm1.ann1.RT27P1 Arachis hypogaea HOM05D003895 ORTHO05D004723 4.9e-74 283.5 353 47.6
BcaB04g17000 Brassica carinata HOM05D003895 ORTHO05D004723 8.7e-71 272.7 224 63.8
SalBow2G0791 Salvia bowleyana HOM05D003895 ORTHO05D004723 3.3e-70 270.8 206 64.6
SalBow2G2695 Salvia bowleyana HOM05D003895 ORTHO05D004723 3.8e-66 257.3 217 59.4
BcaB04g16999 Brassica carinata HOM05D003895 ORTHO05D004723 4.6e-64 250.4 207 63.3
DCAR_006503 Daucus carota HOM05D001368 ORTHO05D003846 1.0e-47 196.1 179 58.7
BcaB04g17001 Brassica carinata HOM05D003895 ORTHO05D004723 8.2e-45 186.4 210 52.9
BcaB05g22068 Brassica carinata HOM05D003895 ORTHO05D004723 6.9e-44 183.3 134 61.2
BcaB01g00975 Brassica carinata HOM05D003895 ORTHO05D004723 5.0e-42 177.2 101 75.2
AagrBONN_evm.TU.Sc2ySwM_228.4951 Anthoceros agrestis HOM05D003895 ORTHO05D004723 5.1e-39 167.2 265 36.6
BcaB01g02352 Brassica carinata HOM05D003895 ORTHO05D004723 2.7e-32 144.8 133 51.9
BcaC01g01457 Brassica carinata HOM05D003895 ORTHO05D004723 4.5e-27 127.5 141 48.9
Sopen06g027550 Solanum pennellii HOM05D003895 ORTHO05D004723 5.9e-27 127.1 161 47.8
Nitab4.5_0000974g0050 Nicotiana tabacum HOM05D003895 ORTHO05D285369 2.3e-23 115.2 101 59.4
MBI15_g06350_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 2.6e-22 111.7 63 74.6
CARHR106400 Cardamine hirsuta HOM05D003895 ORTHO05D004723 4.8e-21 107.5 187 36.4
CARHR260480 Cardamine hirsuta HOM05D003895 ORTHO05D004723 1.8e-20 105.5 187 36.4
Lj4g0022111 Lotus japonicus HOM05D019175 ORTHO05D018974 2.4e-20 105.1 60 81.7
Solyc06g071240.3 Solanum lycopersicum HOM05D003895 ORTHO05D004723 5.3e-20 104.0 130 50.0
Nitab4.5_0001308g0060 Nicotiana tabacum HOM05D003895 ORTHO05D282403 2.9e-18 98.2 111 47.7
CAN.G628.62 Capsicum annuum HOM05D003895 ORTHO05D004723 1.1e-17 96.3 110 50.9
BcaB04g16998 Brassica carinata HOM05D003895 ORTHO05D004723 1.8e-15 89.0 54 70.4
BcaC01g01459 Brassica carinata HOM05D003895 ORTHO05D004723 2.4e-12 78.6 74 55.4
BcaC01g01463 Brassica carinata HOM05D003895 ORTHO05D004723 3.1e-12 78.2 73 56.2
Atru.chr9.1960 Acer truncatum HOM05D003895 ORTHO05D004723 1.0e-10 73.2 46 73.9
Nitab4.5_0004376g0060 Nicotiana tabacum HOM05D003895 ORTHO05D286866 1.7e-10 72.4 50 72.0
PGSC0003DMG400033059 Solanum tuberosum HOM05D003895 ORTHO05D004723 1.4e-07 62.8 40 70.0
Haze_24893 Corylus avellana HOM05D003698 ORTHO05D004320 4.0e-07 61.2 46 67.4
Glyma.17G110701 Glycine max HOM05D003895 ORTHO05D004723 1.2e-06 59.7 34 82.4
Nitab4.5_0000050g0220 Nicotiana tabacum HOM05D003895 ORTHO05D285100 1.2e-06 59.7 44 72.7
Medtr3g108170 Medicago truncatula HOM05D003895 ORTHO05D260611 3.4e-06 58.2 105 39.0


User provided reference genes

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