Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10628 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 4.2e-293 1010.7 553 100.0
vmacro10631 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 1.1e-248 863.2 462 93.7
Rhsim09G0099700 Rhododendron simsii HOM05D003933 ORTHO05D004746 4.7e-204 714.9 424 84.9
Actinidia14952 Actinidia chinensis HOM05D003933 ORTHO05D004746 1.4e-171 607.1 449 70.2
CSS0045284 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 2.6e-170 602.8 449 69.7
CSS0043425 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 4.6e-167 592.0 449 69.0
Duzib132G1110 Durio zibethinus HOM05D003933 ORTHO05D004746 2.8e-156 556.2 448 65.6
Duzib277G0001 Durio zibethinus HOM05D003933 ORTHO05D004746 1.8e-155 553.5 448 65.2
Thecc.02G159300 Theobroma cacao HOM05D003933 ORTHO05D004746 1.8e-155 553.5 448 63.4
Cfa008748 Carpinus fangiana HOM05D003933 ORTHO05D004746 5.3e-155 552.0 450 63.3
Solyc12g088450.3 Solanum lycopersicum HOM05D003933 ORTHO05D004746 5.3e-155 552.0 450 63.1
Nitab4.5_0000569g0090 Nicotiana tabacum HOM05D003933 ORTHO05D004746 6.9e-155 551.6 450 63.1
QL05p009967 Quercus lobata HOM05D003933 ORTHO05D004746 2.6e-154 549.7 449 63.7
Nitab4.5_0003643g0030 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.3e-153 547.4 450 63.3
PGSC0003DMG402011550 Solanum tuberosum HOM05D003933 ORTHO05D004746 1.3e-153 547.4 449 62.6
MD13G1004400 Malus domestica HOM05D003933 ORTHO05D004746 2.2e-153 546.6 450 62.0
Prupe.1G348200 Prunus persica HOM05D003933 ORTHO05D004746 1.9e-152 543.5 449 61.9
CAN.G107.7 Capsicum annuum HOM05D003933 ORTHO05D004746 3.2e-152 542.7 449 61.7
Cc11_g08880 Coffea canephora HOM05D003933 ORTHO05D004746 9.3e-152 541.2 449 62.4
Atru.chr11.1157 Acer truncatum HOM05D003933 ORTHO05D004746 3.5e-151 539.3 448 61.8
MSTRG.890 Avicennia marina HOM05D003933 ORTHO05D004746 3.5e-151 539.3 449 61.9
SGA_v2.0_scaffold38G15064 Striga asiatica HOM05D003933 ORTHO05D004746 4.6e-151 538.9 449 61.0
ECA234G4145 Erigeron canadensis HOM05D003933 ORTHO05D004746 6.0e-151 538.5 414 64.7
HanXRQChr12g0377651 Helianthus annuus HOM05D003933 ORTHO05D004746 2.3e-150 536.6 448 61.2
PGR142G4240 Punica granatum HOM05D003933 ORTHO05D004746 3.0e-150 536.2 449 62.1
Ciclev10031732m.g Citrus clementina HOM05D003933 ORTHO05D004746 1.5e-149 533.9 451 62.5
Migut.L00761 Erythranthe guttata HOM05D003933 ORTHO05D004746 4.3e-149 532.3 452 60.6
Lj6A748G52 Lonicera japonica HOM05D003933 ORTHO05D004746 5.7e-149 531.9 449 62.8
Manes.08G053300 Manihot esculenta HOM05D003933 ORTHO05D004746 5.7e-149 531.9 448 61.8
RcHm_v2.0_Chr4g0446781 Rosa chinensis HOM05D003933 ORTHO05D004746 1.3e-148 530.8 451 60.3
Gohir.A13G060600 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.6e-148 530.4 414 65.5
Aqoxy5G00269 Aquilegia oxysepala HOM05D003933 ORTHO05D004746 2.8e-148 529.6 456 61.4
COL.COLO4_08591 Corchorus olitorius HOM05D003933 ORTHO05D004746 2.8e-148 529.6 448 62.1
DCAR_007284 Daucus carota HOM05D003933 ORTHO05D004746 4.8e-148 528.9 450 61.6
TAR629G2222 Trochodendron aralioides HOM05D003933 ORTHO05D004746 4.8e-148 528.9 450 62.2
Potri.005G092000 Populus trichocarpa HOM05D003933 ORTHO05D004746 6.2e-148 528.5 450 60.7
TWI77G0671 Tripterygium wilfordii HOM05D003933 ORTHO05D004746 1.1e-147 527.7 448 60.3
Gorai.013G069800 Gossypium raimondii HOM05D003933 ORTHO05D004746 2.4e-147 526.6 414 64.7
ClCG10G012050 Citrullus lanatus HOM05D003933 ORTHO05D004746 5.3e-147 525.4 450 62.4
FAN07G0849 Fragaria x ananassa HOM05D003933 ORTHO05D004746 6.9e-147 525.0 450 59.6
Haze_11764 Corylus avellana HOM05D003933 ORTHO05D004746 9.0e-147 524.6 430 63.0
FvH4_4g36990 Fragaria vesca HOM05D003933 ORTHO05D004746 1.5e-146 523.9 450 59.6
Gohir.D13G061300 Gossypium hirsutum HOM05D003933 ORTHO05D004746 4.5e-146 522.3 414 64.3
AUR62032977 Chenopodium quinoa HOM05D003933 ORTHO05D004746 7.6e-146 521.5 451 60.5
Eucgr.J00872 Eucalyptus grandis HOM05D003933 ORTHO05D004746 3.8e-145 519.2 451 59.6
PSO063G7666 Papaver somniferum HOM05D003933 ORTHO05D004746 5.0e-145 518.8 453 60.9
PSO782G2797 Papaver somniferum HOM05D003933 ORTHO05D004746 8.4e-145 518.1 453 61.4
SalBow8G0218 Salvia bowleyana HOM05D003933 ORTHO05D004746 3.2e-144 516.2 448 58.5
Duzib248G0690 Durio zibethinus HOM05D003933 ORTHO05D004746 1.2e-143 514.2 442 60.2
arahy.Tifrunner.gnm1.ann1.2XRJ77 Arachis hypogaea HOM05D003933 ORTHO05D004746 2.7e-143 513.1 425 61.4
Sed0001276 Sechium edule HOM05D003933 ORTHO05D004746 2.7e-143 513.1 417 63.1
arahy.Tifrunner.gnm1.ann1.J5HH0A Arachis hypogaea HOM05D003933 ORTHO05D004746 1.0e-142 511.1 425 61.2
Lsat_1_v5_gn_4_15060 Lactuca sativa HOM05D003933 ORTHO05D004746 1.0e-142 511.1 454 59.9
Manes.09G017800 Manihot esculenta HOM05D003933 ORTHO05D004746 1.8e-142 510.4 450 59.6
THA.LOC104800863 Tarenaya hassleriana HOM05D003933 ORTHO05D004746 2.3e-142 510.0 452 59.1
Hma1.2p1_0933F.1_g238310 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 3.0e-142 509.6 436 62.2
Hma1.2p1_2428F.1_g321995 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 3.0e-142 509.6 436 62.2
Lalb_Chr10g0094951 Lupinus albus HOM05D003933 ORTHO05D004746 3.9e-142 509.2 451 58.8
CANSAT78G0638 Cannabis sativa HOM05D003933 ORTHO05D004746 3.3e-141 506.1 418 61.5
Glyma.09G282800 Glycine max HOM05D003933 ORTHO05D004746 2.8e-140 503.1 457 57.8
Phvul.003G004900 Phaseolus vulgaris HOM05D003933 ORTHO05D004746 2.8e-140 503.1 450 58.2
CsaV3_3G031790 Cucumis sativus L. HOM05D003933 ORTHO05D004746 2.4e-139 500.0 455 60.0
Peaxi162Scf00081g01011 Petunia axillaris HOM05D003933 ORTHO05D004746 3.1e-139 499.6 444 58.8
Cpa.g.sc0.130 Carica papaya HOM05D003933 ORTHO05D004746 5.3e-139 498.8 485 56.7
Psat6g135760 Pisum sativum HOM05D003933 ORTHO05D004746 1.5e-138 497.3 416 60.6
Hund08600 Selenicereus undatus HOM05D003933 ORTHO05D004746 1.5e-138 497.3 451 57.6
MELO3C024011.2 Cucumis melo HOM05D003933 ORTHO05D004746 7.7e-138 495.0 420 61.9
VMungo0251G2024 Vigna mungo HOM05D003933 ORTHO05D004746 1.3e-137 494.2 455 58.5
EL10Ac9g22955 Beta vulgaris HOM05D003933 ORTHO05D004746 2.2e-137 493.4 450 57.6
Medtr1g037570 Medicago truncatula HOM05D003933 ORTHO05D004746 5.0e-137 492.3 424 59.4
Aa31LG3G18300 Aethionema arabicum HOM05D003933 ORTHO05D004746 1.9e-136 490.3 453 57.0
Ca_07914_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 2.5e-136 490.0 415 59.8
TPR.G29790 Trifolium pratense HOM05D003933 ORTHO05D004746 1.2e-135 487.6 416 59.1
Nitab4.5_0000934g0120 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.8e-134 483.8 445 57.5
Lj2g0026122 Lotus japonicus HOM05D003933 ORTHO05D004746 3.3e-133 479.6 415 59.0
Carub.0006s2098 Capsella rubella HOM05D003933 ORTHO05D004746 5.7e-133 478.8 448 55.8
Nitab4.5_0004707g0060 Nicotiana tabacum HOM05D003933 ORTHO05D004746 7.4e-133 478.4 411 60.1
Thhalv10004353m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 1.7e-132 477.2 448 56.2
Peaxi162Scf00160g00123 Petunia axillaris HOM05D003933 ORTHO05D004746 1.7e-132 477.2 385 63.1
CARHR190340 Cardamine hirsuta HOM05D003933 ORTHO05D004746 2.8e-132 476.5 452 56.4
AL6G34400 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 6.3e-132 475.3 449 55.5
AT5G23200 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 3.1e-131 473.0 449 54.8
Sp2g23940 Schrenkiella parvula HOM05D003933 ORTHO05D004746 9.1e-131 471.5 449 55.5
C07p44350 Brassica napus HOM05D003933 ORTHO05D004746 2.0e-130 470.3 451 56.5
BolC7t44956H Brassica oleracea HOM05D003933 ORTHO05D004746 2.0e-130 470.3 451 56.5
BraA03t13757Z Brassica rapa HOM05D003933 ORTHO05D004746 2.6e-130 469.9 449 55.7
CAN.G1054.19 Capsicum annuum HOM05D003933 ORTHO05D004746 2.6e-130 469.9 443 56.0
DCAR_030211 Daucus carota HOM05D003933 ORTHO05D004746 4.5e-130 469.2 389 61.7
Solyc04g078160.4 Solanum lycopersicum HOM05D003933 ORTHO05D004746 4.5e-130 469.2 442 57.2
Os02g0634600 Oryza sativa ssp. japonica HOM05D003933 ORTHO05D004746 1.7e-129 467.2 421 57.0
A03p46330 Brassica napus HOM05D003933 ORTHO05D004746 2.5e-128 463.4 449 55.0
PGSC0003DMG400021516 Solanum tuberosum HOM05D003933 ORTHO05D004746 1.6e-127 460.7 442 56.8
Sopen04g031790 Solanum pennellii HOM05D003933 ORTHO05D004746 3.6e-127 459.5 446 57.0
CiPaw.06G061200 Carya illinoinensis HOM05D003933 ORTHO05D004746 1.8e-126 457.2 367 63.2
FAN12G2057 Fragaria x ananassa HOM05D003933 ORTHO05D004746 2.6e-125 453.4 450 54.4
Lj3g0018867 Lotus japonicus HOM05D003933 ORTHO05D004746 3.1e-123 446.4 444 54.7
CANSAT11G2660 Cannabis sativa HOM05D003933 ORTHO05D004746 7.0e-123 445.3 446 53.4
Glyma.11G100000 Glycine max HOM05D003933 ORTHO05D004746 7.7e-122 441.8 445 55.5
unitig_26.g10014 Utricularia gibba HOM05D003933 ORTHO05D004746 3.2e-120 436.4 403 56.3
ATR0618G423 Amborella trichopoda HOM05D003933 ORTHO05D004746 9.4e-120 434.9 421 55.3
AL6G18670 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 1.2e-119 434.5 448 52.0
Lj3g0001561 Lotus japonicus HOM05D003933 ORTHO05D004746 1.2e-119 434.5 444 53.8
Ca_19016_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 2.3e-118 430.3 442 54.3
arahy.Tifrunner.gnm1.ann1.E3G1QY Arachis hypogaea HOM05D003933 ORTHO05D004746 6.7e-118 428.7 441 52.6
arahy.Tifrunner.gnm1.ann1.3AB2AC Arachis hypogaea HOM05D003933 ORTHO05D004746 1.5e-117 427.6 441 52.6
Gohir.A03G165000 Gossypium hirsutum HOM05D003933 ORTHO05D004746 2.8e-116 423.3 446 52.0
Sabra05G0076300 Salix brachista HOM05D003933 ORTHO05D004746 4.8e-116 422.5 355 60.6
Thhalv10013838m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 1.6e-114 417.5 446 50.4
VMungo1127G0010 Vigna mungo HOM05D003933 ORTHO05D004746 2.6e-114 416.8 410 56.1
Medtr4g075120 Medicago truncatula HOM05D003933 ORTHO05D004746 5.0e-113 412.5 443 51.9
Gorai.005G210900 Gossypium raimondii HOM05D003933 ORTHO05D004746 2.5e-112 410.2 446 51.3
BcaB08g37269 Brassica carinata HOM05D003933 ORTHO05D004746 4.2e-112 409.5 447 50.1
Gohir.D02G188200 Gossypium hirsutum HOM05D003933 ORTHO05D004746 7.2e-112 408.7 446 51.3
AT5G08270 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 1.2e-111 407.9 439 50.1
Sp6g34690 Schrenkiella parvula HOM05D003933 ORTHO05D004746 1.2e-111 407.9 427 51.3
MBI06_g23608_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 2.7e-111 406.8 385 56.1
Sopen12g030430 Solanum pennellii HOM05D003933 ORTHO05D004746 1.8e-110 404.1 256 74.2
MBI06_g32507_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 1.3e-108 397.9 338 59.2
Lalb_Chr19g0139431 Lupinus albus HOM05D003933 ORTHO05D004746 7.7e-106 388.7 449 50.1
CSS0006186 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 2.9e-105 386.7 265 72.5
Potri.005G092100 Populus trichocarpa HOM05D003933 ORTHO05D004746 1.9e-104 384.0 395 52.7
Carub.0006s0715 Capsella rubella HOM05D003933 ORTHO05D004746 8.0e-103 378.6 381 51.4
CSS0013970 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.5e-101 374.4 275 67.6
C09p68670 Brassica napus HOM05D003933 ORTHO05D004746 5.7e-101 372.5 445 47.4
BolC9t59613H Brassica oleracea HOM05D003933 ORTHO05D004746 7.5e-101 372.1 445 47.2
Lj3g0003114 Lotus japonicus HOM05D003933 ORTHO05D004746 1.3e-100 371.3 394 51.5
Lj3g0021014 Lotus japonicus HOM05D003933 ORTHO05D004746 1.3e-100 371.3 394 51.5
Lj3g0017683 Lotus japonicus HOM05D003933 ORTHO05D004746 2.8e-100 370.2 394 51.3
BraA10t44888Z Brassica rapa HOM05D003933 ORTHO05D004746 3.7e-100 369.8 445 47.2
HPP92_008573 Vanilla planifolia HOM05D003933 ORTHO05D004746 7.0e-99 365.5 376 52.1
Zm00001eb248160 Zea mays HOM05D003933 ORTHO05D004746 9.2e-99 365.2 338 54.1
A10p28410 Brassica napus HOM05D003933 ORTHO05D004746 3.5e-98 363.2 407 49.1
TPR.G25000 Trifolium pratense HOM05D003933 ORTHO05D004746 5.0e-97 359.4 378 52.1
GSVIVG01026245001 Vitis vinifera HOM05D003933 ORTHO05D004746 7.3e-96 355.5 450 48.4
Dinv17619 Davidia involucrata HOM05D003933 ORTHO05D004746 1.4e-94 351.3 304 63.8
SEGI_04055 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 1.2e-93 348.2 409 46.2
CSS0049411 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 7.5e-93 345.5 234 70.9
CSS0027256 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 8.3e-92 342.0 260 64.2
Ca_20843_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 8.3e-92 342.0 360 52.8
Psat7g177760 Pisum sativum HOM05D003933 ORTHO05D004746 5.0e-89 332.8 359 51.0
FAN17G2963 Fragaria x ananassa HOM05D003933 ORTHO05D004746 1.5e-88 331.3 293 56.3
Mapoly0072s0109 Marchantia polymorpha HOM05D003933 ORTHO05D004746 7.0e-83 312.4 420 42.1
CDE08G0738 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 5.0e-81 306.2 256 59.8
CARHR204870 Cardamine hirsuta HOM05D003933 ORTHO05D004746 1.4e-78 298.1 272 54.8
SMO364G0332 Selaginella moellendorffii HOM05D003933 ORTHO05D004746 2.3e-78 297.4 413 41.6
AagrBONN_evm.TU.Sc2ySwM_117.4016 Anthoceros agrestis HOM05D003933 ORTHO05D004746 7.1e-75 285.8 417 39.3
Pp3c10_5850 Physcomitrium patens HOM05D003933 ORTHO05D004746 1.0e-73 282.0 420 40.0
Sed0007936 Sechium edule HOM05D003933 ORTHO05D004746 2.3e-70 270.8 301 51.2
MD16G1003200 Malus domestica HOM05D003933 ORTHO05D004746 2.8e-63 247.3 386 41.7
Sc10g0005110 Simmondsia chinensis HOM05D003933 ORTHO05D004746 5.2e-62 243.0 196 60.7
PGSC0003DMG400011553 Solanum tuberosum HOM05D003933 ORTHO05D004746 3.8e-60 236.9 161 68.9
CBR_g6576 Chara braunii HOM05D003933 ORTHO05D004746 2.0e-53 214.5 441 31.7
MCO06G263 Micromonas commoda HOM05D003933 ORTHO05D004746 2.5e-40 171.0 326 35.9
SHI31071 Sapria himalayana HOM05D003933 ORTHO05D004746 4.5e-37 160.2 388 32.2
Sc10g0005100 Simmondsia chinensis HOM05D003933 ORTHO05D004746 7.1e-35 152.9 161 55.9
Oeu044350.1 Olea europaea HOM05D003933 ORTHO05D004746 6.0e-34 149.8 156 55.8
Nn7g37760 Nelumbo nucifera HOM05D003933 ORTHO05D004746 3.0e-33 147.5 160 56.2
COL.COLO4_20883 Corchorus olitorius HOM05D003933 ORTHO05D004746 2.1e-31 141.4 113 59.3
C02p60970 Brassica napus HOM05D003933 ORTHO05D004746 1.7e-28 131.7 263 33.8
Cre02.g086076 Chlamydomonas reinhardtii HOM05D003933 ORTHO05D004746 1.7e-28 131.7 343 25.9
C06p10890 Brassica napus HOM05D003933 ORTHO05D004746 6.5e-28 129.8 263 33.1
CDE08G1244 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 6.5e-28 129.8 156 50.6
BcaC03g18034 Brassica carinata HOM05D003933 ORTHO05D004746 8.7e-25 119.4 399 27.1
A02p41110 Brassica napus HOM05D003933 ORTHO05D004746 2.4e-22 111.3 98 53.1
Dinv17620 Davidia involucrata HOM05D003933 ORTHO05D028341 4.1e-22 110.5 68 80.9
MBI06_g42297_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 2.2e-15 88.2 136 42.6
SEGI_32331 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 2.6e-13 81.3 107 43.9
CARHR204860 Cardamine hirsuta HOM05D003933 ORTHO05D004746 1.9e-11 75.1 72 55.6
BolC2t12147H Brassica oleracea HOM05D003933 ORTHO05D028341 1.1e-08 65.9 49 63.3
Psat7g177720 Pisum sativum HOM05D003933 ORTHO05D004746 2.8e-07 61.2 67 53.7
COL.COLO4_20881 Corchorus olitorius HOM05D003933 ORTHO05D004746 8.2e-07 59.7 66 54.5


User provided reference genes

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