Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 2.3e-254 881.7 443 100.0
Rhsim09G0101300 Rhododendron simsii HOM05D005467 ORTHO05D006523 1.6e-170 603.2 501 68.5
Actinidia14942 Actinidia chinensis HOM05D005467 ORTHO05D006523 5.9e-165 584.7 475 66.9
CSS0047900 Camellia sinensis var. sinensis HOM05D005467 ORTHO05D006523 8.5e-164 580.9 477 67.1
Lj6C750G3 Lonicera japonica HOM05D005467 ORTHO05D006523 1.8e-150 536.6 482 60.6
Hma1.2p1_0114F.1_g055340 Hydrangea macrophylla HOM05D005467 ORTHO05D006523 1.3e-148 530.4 479 61.0
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 2.9e-148 529.3 476 61.6
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 3.6e-146 522.3 474 60.1
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 1.4e-145 520.4 474 59.7
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 9.8e-144 514.2 463 61.1
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 4.8e-143 511.9 467 59.5
CiPaw.05G246600 Carya illinoinensis HOM05D005467 ORTHO05D006523 1.1e-142 510.8 466 60.7
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 1.1e-142 510.8 463 59.8
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 1.4e-142 510.4 460 60.2
TAR629G1677 Trochodendron aralioides HOM05D005467 ORTHO05D006523 1.4e-142 510.4 475 58.5
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 5.4e-142 508.4 477 58.3
HanXRQChr15g0477671 Helianthus annuus HOM05D005467 ORTHO05D006523 9.1e-142 507.7 474 57.8
Glyma.10G266400 Glycine max HOM05D005467 ORTHO05D006523 2.0e-141 506.5 463 59.2
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 2.0e-141 506.5 503 57.9
MD16G1031500 Malus domestica HOM05D005467 ORTHO05D006523 2.7e-141 506.1 466 59.9
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 3.5e-141 505.8 463 60.3
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 4.5e-141 505.4 472 59.1
arahy.Tifrunner.gnm1.ann1.U1J3BU Arachis hypogaea HOM05D005467 ORTHO05D006523 5.9e-141 505.0 463 59.2
Lj5g0001822 Lotus japonicus HOM05D005467 ORTHO05D006523 1.7e-140 503.4 477 57.7
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 2.3e-140 503.1 475 57.7
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 2.9e-140 502.7 480 58.3
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 5.0e-140 501.9 507 57.2
Phvul.007G035400 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 1.5e-139 500.4 463 58.3
ECA246G2902 Erigeron canadensis HOM05D005467 ORTHO05D006523 2.5e-139 499.6 482 57.7
Glyma.20G124100 Glycine max HOM05D005467 ORTHO05D006523 4.2e-139 498.8 466 59.0
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 5.5e-139 498.4 467 58.9
VMungo0720G1946 Vigna mungo HOM05D005467 ORTHO05D006523 2.1e-138 496.5 463 57.7
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 4.7e-138 495.4 460 59.8
Lalb_Chr21g0308561 Lupinus albus HOM05D005467 ORTHO05D006523 4.7e-138 495.4 464 58.2
Eucgr.G02222 Eucalyptus grandis HOM05D005467 ORTHO05D006523 1.4e-137 493.8 473 57.1
QL01p002615 Quercus lobata HOM05D005467 ORTHO05D006523 3.0e-137 492.7 561 51.5
arahy.Tifrunner.gnm1.ann1.F0PHAM Arachis hypogaea HOM05D005467 ORTHO05D006523 4.0e-137 492.3 486 56.4
Sed0008724 Sechium edule HOM05D005467 ORTHO05D006523 5.2e-137 491.9 463 57.2
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 1.5e-136 490.3 469 56.9
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 2.0e-136 490.0 469 56.9
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 1.4e-134 483.8 467 56.5
CsaV3_5G034840 Cucumis sativus L. HOM05D005467 ORTHO05D006523 4.1e-134 482.3 463 56.4
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 4.5e-133 478.8 475 54.1
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 7.8e-133 478.0 473 55.6
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 1.0e-132 477.6 465 55.5
TPR.G4835 Trifolium pratense HOM05D005467 ORTHO05D006523 1.3e-132 477.2 475 54.9
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 2.9e-132 476.1 465 55.1
Psat6g222960 Pisum sativum HOM05D005467 ORTHO05D006523 6.8e-129 464.9 477 53.0
Peaxi162Scf00205g00928 Petunia axillaris HOM05D005467 ORTHO05D006523 3.4e-128 462.6 465 55.1
Aqoxy3G00153 Aquilegia oxysepala HOM05D005467 ORTHO05D006523 7.5e-128 461.5 479 54.3
Sopen05g004250 Solanum pennellii HOM05D005467 ORTHO05D006523 1.3e-127 460.7 465 55.5
CAN.G1489.4 Capsicum annuum HOM05D005467 ORTHO05D006523 1.9e-126 456.8 465 55.3
FAN12G3855 Fragaria x ananassa HOM05D005467 ORTHO05D006523 7.0e-126 454.9 480 54.8
ClCG05G022280 Citrullus lanatus HOM05D005467 ORTHO05D006523 2.0e-125 453.4 542 49.8
FAN12G1869 Fragaria x ananassa HOM05D005467 ORTHO05D006523 7.8e-125 451.4 480 54.8
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 5.0e-124 448.7 421 59.6
Nitab4.5_0000350g0200 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.9e-123 446.8 453 54.3
MBI10_g46301_MAGBIO Magnolia biondii HOM05D005467 ORTHO05D006523 9.5e-123 444.5 419 58.0
Prupe.1G321400 Prunus persica HOM05D005467 ORTHO05D006523 4.7e-122 442.2 420 58.6
AUR62014129 Chenopodium quinoa HOM05D005467 ORTHO05D006523 1.8e-121 440.3 482 52.1
Ca_11108_v3 Cicer arietinum L. HOM05D005467 ORTHO05D006523 1.2e-120 437.6 475 51.8
Duzib248G1088 Durio zibethinus HOM05D005467 ORTHO05D006523 7.5e-120 434.9 464 54.3
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 1.4e-118 430.6 494 49.6
Solyc05g008420.4 Solanum lycopersicum HOM05D005467 ORTHO05D006523 2.4e-118 429.9 450 54.0
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 9.2e-118 427.9 461 53.6
Os01g0506200 Oryza sativa ssp. japonica HOM05D005467 ORTHO05D006523 7.8e-117 424.9 462 50.4
Dinv05879 Davidia involucrata HOM05D005467 ORTHO05D006523 4.0e-113 412.5 351 64.4
Hund24998 Selenicereus undatus HOM05D005467 ORTHO05D006523 9.9e-112 407.9 465 51.6
Gohir.D04G138632 Gossypium hirsutum HOM05D005467 ORTHO05D006523 4.9e-111 405.6 347 63.4
TAR622G1271 Trochodendron aralioides HOM05D005467 ORTHO05D006523 3.0e-108 396.4 392 56.9
MSTRG.879 Avicennia marina HOM05D005467 ORTHO05D006523 2.1e-106 390.2 408 53.4
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 2.0e-104 383.6 506 45.3
MELO3C012295.2 Cucumis melo HOM05D005467 ORTHO05D006523 7.6e-104 381.7 366 56.6
Sc04g0005780 Simmondsia chinensis HOM05D005467 ORTHO05D006523 1.6e-101 374.0 220 80.5
Nitab4.5_0004524g0030 Nicotiana tabacum HOM05D005467 ORTHO05D006523 8.7e-100 368.2 344 57.6
AUR62039552 Chenopodium quinoa HOM05D005467 ORTHO05D006523 5.6e-99 365.5 482 46.3
Oeu064202.3 Olea europaea HOM05D005467 ORTHO05D006523 4.6e-93 345.9 259 68.3
SMO172G0164 Selaginella moellendorffii HOM05D005467 ORTHO05D006523 1.3e-92 344.4 470 43.8
Pp3c22_2590 Physcomitrium patens HOM05D005467 ORTHO05D006523 2.8e-90 336.7 439 43.3
CDE06G2222 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 1.8e-89 334.0 219 73.5
ATR0041G011 Amborella trichopoda HOM05D005467 ORTHO05D006523 2.0e-88 330.5 448 43.1
unitig_21.g20024 Utricularia gibba HOM05D000903 ORTHO05D000731 4.9e-87 325.9 467 42.6
SEGI_12457 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 3.2e-86 323.2 229 68.6
Dinv04888 Davidia involucrata HOM05D005467 ORTHO05D006523 2.3e-84 317.0 193 81.9
AagrBONN_evm.TU.Sc2ySwM_344.4352 Anthoceros agrestis HOM05D005467 ORTHO05D006523 6.2e-82 308.9 446 42.6
Gohir.D04G138566 Gossypium hirsutum HOM05D005467 ORTHO05D006523 4.5e-80 302.8 336 52.4
Nitab4.5_0000293g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 3.2e-78 296.6 446 39.5
Cc11_g09130 Coffea canephora HOM05D005467 ORTHO05D006523 5.1e-76 289.3 334 50.9
Lsat_1_v5_gn_3_54101 Lactuca sativa HOM05D005467 ORTHO05D006523 5.1e-76 289.3 333 52.6
Nitab4.5_0000350g0270 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.4e-73 280.4 431 39.0
Peaxi162Scf00159g00824 Petunia axillaris HOM05D005467 ORTHO05D006523 1.0e-71 275.0 561 35.3
HPP92_008650 Vanilla planifolia HOM05D005467 ORTHO05D006523 1.0e-60 238.4 333 43.2
Haze_11049 Corylus avellana HOM05D005467 ORTHO05D006523 1.1e-59 235.0 156 76.3
Sopen02g012020 Solanum pennellii HOM05D005467 ORTHO05D006523 2.5e-59 233.8 424 34.2
Peaxi162Scf00159g00823 Petunia axillaris HOM05D005467 ORTHO05D006523 3.3e-59 233.4 478 33.1
CBR_g17592 Chara braunii HOM05D005467 ORTHO05D006523 4.3e-59 233.0 420 36.0
PGSC0003DMG400029189 Solanum tuberosum HOM05D005467 ORTHO05D006523 4.3e-59 233.0 423 34.3
Sopen02g012000 Solanum pennellii HOM05D005467 ORTHO05D006523 9.7e-59 231.9 431 34.3
Sopen02g012010 Solanum pennellii HOM05D005467 ORTHO05D006523 5.3e-57 226.1 429 33.3
Cc11_g09120 Coffea canephora HOM05D005467 ORTHO05D006523 1.2e-56 224.9 141 75.2
PGSC0003DMG400017873 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.6e-56 223.8 436 33.0
Zm00001eb341680 Zea mays HOM05D005467 ORTHO05D006523 8.2e-50 202.2 374 36.1
Solyc02g038680.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 3.8e-47 193.4 430 32.1
MCO12G173 Micromonas commoda HOM05D005467 ORTHO05D006523 4.0e-44 183.3 384 33.6
Haze_11050 Corylus avellana HOM05D005467 ORTHO05D006523 1.8e-41 174.5 213 49.3
Solyc02g038670.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 6.5e-39 166.0 428 29.0
PRCOL_00002109 Prasinoderma coloniale HOM05D005467 ORTHO05D006523 4.0e-36 156.8 400 30.2
Sed0021963 Sechium edule HOM05D005467 ORTHO05D006523 1.5e-35 154.8 242 40.5
FAN17G2566 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.3e-34 151.8 170 51.2
Solyc02g038650.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.3e-34 151.8 364 30.2
Lsat_1_v5_gn_3_86380 Lactuca sativa HOM05D005467 ORTHO05D006523 2.0e-32 144.4 80 87.5
Nitab4.5_0019054g0020 Nicotiana tabacum HOM05D005467 ORTHO05D006523 4.7e-29 133.3 160 45.0
Solyc02g038660.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 6.1e-29 132.9 210 37.1
Lsat_1_v5_gn_3_107041 Lactuca sativa HOM05D005467 ORTHO05D006523 4.0e-28 130.2 182 46.2
Nitab4.5_0002820g0070 Nicotiana tabacum HOM05D005467 ORTHO05D006523 4.9e-26 123.2 143 45.5
Sopen02g012080 Solanum pennellii HOM05D005467 ORTHO05D006523 2.0e-24 117.9 425 25.9
Nitab4.5_0004524g0050 Nicotiana tabacum HOM05D005467 ORTHO05D006523 7.7e-24 115.9 77 71.4
Peaxi162Scf00205g00812 Petunia axillaris HOM05D005467 ORTHO05D006523 6.6e-23 112.8 446 26.7
PGSC0003DMG400029188 Solanum tuberosum HOM05D005467 ORTHO05D006523 6.6e-23 112.8 324 28.7
RcHm_v2.0_Chr7g0235151 Rosa chinensis HOM05D005467 ORTHO05D006523 2.1e-21 107.8 173 43.4
Phvul.008G137000 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 3.6e-21 107.1 55 85.5
Lsat_1_v5_gn_4_96160 Lactuca sativa HOM05D005467 ORTHO05D006523 9.8e-19 99.0 153 42.5
Lsat_1_v5_gn_7_58700 Lactuca sativa HOM05D005467 ORTHO05D006523 9.8e-19 99.0 153 43.8
Nitab4.5_0004367g0150 Nicotiana tabacum HOM05D005467 ORTHO05D006523 3.7e-18 97.1 84 51.2
Nitab4.5_0002820g0080 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.8e-17 94.7 80 51.2
PGSC0003DMG400023165 Solanum tuberosum HOM05D005467 ORTHO05D006523 3.2e-17 94.0 69 56.5
PGSC0003DMG400017875 Solanum tuberosum HOM05D005467 ORTHO05D006523 5.4e-17 93.2 77 51.9
CDE07G1108 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 2.0e-16 91.3 80 52.5
PGSC0003DMG400038827 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.3e-15 88.6 104 37.5
Solyc02g038700.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 8.9e-12 75.9 62 51.6
vmacro06010 Vaccinium macrocarpon HOM05D000809 ORTHO05D001196 1.1e-09 68.9 39 79.5
RcHm_v2.0_Chr3g0493761 Rosa chinensis HOM05D005467 ORTHO05D006523 2.4e-09 67.8 154 36.4
FAN17G1461 Fragaria x ananassa HOM05D005467 ORTHO05D006523 3.2e-09 67.4 108 40.7
vmacro05063 Vaccinium macrocarpon HOM05D001419 ORTHO05D001376 3.2e-09 67.4 47 68.1
vmacro16026 Vaccinium macrocarpon HOM05D017964 ORTHO05D023176 3.2e-09 67.4 34 88.2
vmacro13309 Vaccinium macrocarpon HOM05D001826 ORTHO05D004184 4.1e-09 67.0 31 93.5
vmacro09699 Vaccinium macrocarpon HOM05D005193 ORTHO05D006316 1.2e-08 65.5 43 72.1
vmacro17718 Vaccinium macrocarpon HOM05D003484 ORTHO05D004152 1.2e-08 65.5 34 85.3
Lsat_1_v5_gn_6_22900 Lactuca sativa HOM05D005467 ORTHO05D006523 1.6e-08 65.1 36 80.6
MD05G1282800 Malus domestica HOM05D005467 ORTHO05D006523 1.6e-08 65.1 168 31.0
vmacro02294 Vaccinium macrocarpon HOM05D001373 ORTHO05D001330 2.0e-08 64.7 96 40.6
vmacro16015 Vaccinium macrocarpon HOM05D005906 ORTHO05D007359 2.0e-08 64.7 37 83.8
vmacro11662 Vaccinium macrocarpon HOM05D001622 ORTHO05D002989 3.5e-08 63.9 30 93.3
vmacro13488 Vaccinium macrocarpon HOM05D002629 ORTHO05D003221 3.5e-08 63.9 31 93.5
vmacro18579 Vaccinium macrocarpon HOM05D003001 ORTHO05D003494 6.0e-08 63.2 31 90.3
vmacro19454 Vaccinium macrocarpon HOM05D004852 ORTHO05D006128 6.0e-08 63.2 33 87.9
Lsat_1_v5_gn_9_124480 Lactuca sativa HOM05D001159 ORTHO05D001712 1.0e-07 62.4 41 68.3
vmacro02184 Vaccinium macrocarpon HOM05D001453 ORTHO05D001444 1.0e-07 62.4 31 90.3
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 1.0e-07 62.4 44 68.2
vmacro08551 Vaccinium macrocarpon HOM05D000932 ORTHO05D000729 1.3e-07 62.0 34 85.3
vmacro18325 Vaccinium macrocarpon HOM05D005231 ORTHO05D006387 1.3e-07 62.0 31 87.1
vmacro03968 Vaccinium macrocarpon HOM05D000513 ORTHO05D003825 6.6e-07 59.7 41 70.7
vmacro19800 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 6.6e-07 59.7 35 80.0
vmacro06073 Vaccinium macrocarpon HOM05D000331 ORTHO05D021523 8.6e-07 59.3 30 90.0
vmacro11032 Vaccinium macrocarpon HOM05D003679 ORTHO05D004265 8.6e-07 59.3 36 77.8
Nitab4.5_0000688g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.1e-06 58.9 47 48.9
vmacro10605 Vaccinium macrocarpon HOM05D001245 ORTHO05D004475 1.5e-06 58.5 30 90.0
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 1.9e-06 58.2 48 58.3
vmacro04727 Vaccinium macrocarpon HOM05D000101 ORTHO05D000089 3.3e-06 57.4 30 83.3
vmacro05371 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 9.5e-06 55.8 26 92.3
vmacro19433 Vaccinium macrocarpon HOM05D000012 ORTHO05D002455 9.5e-06 55.8 43 65.1
vmacro23276 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 9.5e-06 55.8 26 92.3


User provided reference genes

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